RNA–Protein interactions for RNA: ENST00000256062.9

TMTC1-201, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene TMTC1, Length 8,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-201ENST00000256062 COL7A1Q02388 2944 aa4.05□□□□□ -1.76
TMTC1-201ENST00000256062 ALMS1Q8TCU4 4167 aa4.01□□□□□ -1.77
TMTC1-201ENST00000256062 MT3P25713 68 aa4.01□□□□□ -1.77
TMTC1-201ENST00000256062 DYNC2H1Q8NCM8 4307 aaKnown RBP3.99□□□□□ -1.77
TMTC1-201ENST00000256062 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
TMTC1-201ENST00000256062 INE1O15225 51 aa3.96□□□□□ -1.78
TMTC1-201ENST00000256062 KRTAP4-5Q9BYR2 181 aa3.94□□□□□ -1.78
TMTC1-201ENST00000256062 KRTAP10-12P60413 245 aa3.94□□□□□ -1.78
TMTC1-201ENST00000256062 DNAH9Q9NYC9 4486 aa3.93□□□□□ -1.78
TMTC1-201ENST00000256062 MT1HL1P0DM35 61 aa3.9□□□□□ -1.79
TMTC1-201ENST00000256062 VPS13BQ7Z7G8 4022 aa3.86□□□□□ -1.79
TMTC1-201ENST00000256062 DNAH1Q9P2D7 4330 aa3.86□□□□□ -1.79
TMTC1-201ENST00000256062 FBN3Q75N90 2809 aa3.85□□□□□ -1.79
TMTC1-201ENST00000256062 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
TMTC1-201ENST00000256062 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
TMTC1-201ENST00000256062 KRTAP3-2Q9BYR7 98 aa3.8□□□□□ -1.8
TMTC1-201ENST00000256062 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
TMTC1-201ENST00000256062 LORP23490 312 aaPredicted RBP3.79□□□□□ -1.8
TMTC1-201ENST00000256062 KRTAP3-3Q9BYR6 98 aa3.79□□□□□ -1.8
TMTC1-201ENST00000256062 VPS13DQ5THJ4 4388 aa3.72□□□□□ -1.81
TMTC1-201ENST00000256062 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
TMTC1-201ENST00000256062 PKHD1L1Q86WI1 4243 aa3.72□□□□□ -1.81
TMTC1-201ENST00000256062 DNAH10Q8IVF4 4471 aa3.72□□□□□ -1.81
TMTC1-201ENST00000256062 MEGF8Q7Z7M0 2845 aa3.71□□□□□ -1.81
TMTC1-201ENST00000256062 PKHD1P08F94 4074 aa3.71□□□□□ -1.82
TMTC1-201ENST00000256062 STARD9Q9P2P6 4700 aa3.68□□□□□ -1.82
TMTC1-201ENST00000256062 PKD1P98161 4303 aa3.67□□□□□ -1.82
TMTC1-201ENST00000256062 FAT2Q9NYQ8 4349 aa3.66□□□□□ -1.82
TMTC1-201ENST00000256062 DNAH2Q9P225 4427 aa3.66□□□□□ -1.82
TMTC1-201ENST00000256062 KRTAP10-4P60372 401 aaPredicted RBP3.66□□□□□ -1.82
TMTC1-201ENST00000256062 PLECQ15149 4684 aaKnown RBP3.6□□□□□ -1.83
TMTC1-201ENST00000256062 DNAH17Q9UFH2 4485 aa3.56□□□□□ -1.84
TMTC1-201ENST00000256062 DNAH11Q96DT5 4516 aa3.54□□□□□ -1.84
TMTC1-201ENST00000256062 DNAH8Q96JB1 4490 aa3.53□□□□□ -1.85
TMTC1-201ENST00000256062 KRTAP4-1Q9BYQ7 146 aa3.51□□□□□ -1.85
TMTC1-201ENST00000256062 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
TMTC1-201ENST00000256062 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
TMTC1-201ENST00000256062 MT1HP80294 61 aa3.48□□□□□ -1.85
TMTC1-201ENST00000256062 TNXBP22105 4242 aa3.46□□□□□ -1.86
TMTC1-201ENST00000256062 DNAH5Q8TE73 4624 aa3.44□□□□□ -1.86
TMTC1-201ENST00000256062 MT2AP02795 61 aa3.43□□□□□ -1.86
TMTC1-201ENST00000256062 KRTAP19-5Q3LI72 72 aa3.4□□□□□ -1.87
TMTC1-201ENST00000256062 HSPG2P98160 4391 aa3.38□□□□□ -1.87
TMTC1-201ENST00000256062 MT1FP04733 61 aa3.37□□□□□ -1.87
TMTC1-201ENST00000256062 FAT1Q14517 4588 aa3.36□□□□□ -1.87
TMTC1-201ENST00000256062 SACSQ9NZJ4 4579 aa3.35□□□□□ -1.87
TMTC1-201ENST00000256062 RYR1P21817 5038 aa3.33□□□□□ -1.88
TMTC1-201ENST00000256062 LRP1BQ9NZR2 4599 aa3.33□□□□□ -1.88
TMTC1-201ENST00000256062 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
TMTC1-201ENST00000256062 SPRR2EP22531 72 aa3.29□□□□□ -1.88
TMTC1-201ENST00000256062 SPRR2BP35325 72 aa3.29□□□□□ -1.88
TMTC1-201ENST00000256062 SPRR2AP35326 72 aa3.29□□□□□ -1.88
TMTC1-201ENST00000256062 DNHD1Q96M86 4753 aa3.29□□□□□ -1.88
TMTC1-201ENST00000256062 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
TMTC1-201ENST00000256062 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
TMTC1-201ENST00000256062 LCE3BQ5TA77 95 aa3.25□□□□□ -1.89
TMTC1-201ENST00000256062 DYNC1H1Q14204 4646 aaKnown RBP3.24□□□□□ -1.89
TMTC1-201ENST00000256062 MT1GP13640 62 aa3.18□□□□□ -1.9
TMTC1-201ENST00000256062 FLGP20930 4061 aaPredicted RBP3.18□□□□□ -1.9
TMTC1-201ENST00000256062 SPRR2DP22532 72 aa3.17□□□□□ -1.9
TMTC1-201ENST00000256062 HYDINQ4G0P3 5121 aa3.14□□□□□ -1.91
TMTC1-201ENST00000256062 RYR3Q15413 4870 aa3.14□□□□□ -1.91
TMTC1-201ENST00000256062 FAT3Q8TDW7 4589 aa3.12□□□□□ -1.91
TMTC1-201ENST00000256062 KRTAP4-8A0A0G2JLE6 195 aa3.09□□□□□ -1.92
TMTC1-201ENST00000256062 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.92
TMTC1-201ENST00000256062 LCE2BO14633 110 aa3.08□□□□□ -1.92
TMTC1-201ENST00000256062 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
TMTC1-201ENST00000256062 HERC1Q15751 4861 aa3.07□□□□□ -1.92
TMTC1-201ENST00000256062 MYCBP2O75592 4640 aa3.05□□□□□ -1.92
TMTC1-201ENST00000256062 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
TMTC1-201ENST00000256062 KRTAP17-1Q9BYP8 105 aa3.03□□□□□ -1.92
TMTC1-201ENST00000256062 KIAA1109Q2LD37 5005 aa3.02□□□□□ -1.93
TMTC1-201ENST00000256062 MT1XP80297 61 aa3.02□□□□□ -1.93
TMTC1-201ENST00000256062 LRP1Q07954 4544 aaKnown RBP3.02□□□□□ -1.93
TMTC1-201ENST00000256062 KMT2CQ8NEZ4 4911 aaKnown RBP2.99□□□□□ -1.93
TMTC1-201ENST00000256062 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
TMTC1-201ENST00000256062 MT1BP07438 61 aa2.98□□□□□ -1.93
TMTC1-201ENST00000256062 MUC17Q685J3 4493 aa2.96□□□□□ -1.94
TMTC1-201ENST00000256062 KRTAP4-7Q9BYR0 210 aa2.96□□□□□ -1.94
TMTC1-201ENST00000256062 EPPK1P58107 5090 aaKnown RBP2.96□□□□□ -1.94
TMTC1-201ENST00000256062 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
TMTC1-201ENST00000256062 LPAP08519 4548 aa2.95□□□□□ -1.94
TMTC1-201ENST00000256062 PCLOQ9Y6V0 5065 aa2.94□□□□□ -1.94
TMTC1-201ENST00000256062 LCE2CQ5TA81 110 aa2.92□□□□□ -1.94
TMTC1-201ENST00000256062 LCE2DQ5TA82 110 aaPredicted RBP2.92□□□□□ -1.94
TMTC1-201ENST00000256062 HERC2O95714 4834 aa2.92□□□□□ -1.94
TMTC1-201ENST00000256062 MT4P47944 62 aa2.91□□□□□ -1.94
TMTC1-201ENST00000256062 KRTAP9-8Q9BYQ0 159 aa2.9□□□□□ -1.95
TMTC1-201ENST00000256062 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
TMTC1-201ENST00000256062 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
TMTC1-201ENST00000256062 RYR2Q92736 4967 aa2.88□□□□□ -1.95
TMTC1-201ENST00000256062 BIRC6Q9NR09 4857 aa2.88□□□□□ -1.95
TMTC1-201ENST00000256062 KRTAP9-3Q9BYQ3 159 aa2.86□□□□□ -1.95
TMTC1-201ENST00000256062 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
TMTC1-201ENST00000256062 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
TMTC1-201ENST00000256062 LOC100996750A0A140TA64 210 aa2.79□□□□□ -1.96
TMTC1-201ENST00000256062 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
TMTC1-201ENST00000256062 MT1LQ93083 61 aa2.77□□□□□ -1.97
TMTC1-201ENST00000256062 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
TMTC1-201ENST00000256062 ABCA13Q86UQ4 5058 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms