RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 PLECQ15149 4684 aaKnown RBP6.96□□□□□ -1.29
LRRFIP1-201ENST00000244815 DNHD1Q96M86 4753 aa6.96□□□□□ -1.3
LRRFIP1-201ENST00000244815 DNAH1Q9P2D7 4330 aa6.93□□□□□ -1.3
LRRFIP1-201ENST00000244815 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
LRRFIP1-201ENST00000244815 DNAH10Q8IVF4 4471 aa6.88□□□□□ -1.31
LRRFIP1-201ENST00000244815 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
LRRFIP1-201ENST00000244815 FAT1Q14517 4588 aa6.81□□□□□ -1.32
LRRFIP1-201ENST00000244815 INE1O15225 51 aa6.8□□□□□ -1.32
LRRFIP1-201ENST00000244815 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
LRRFIP1-201ENST00000244815 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
LRRFIP1-201ENST00000244815 LCE3AQ5TA76 89 aa6.77□□□□□ -1.33
LRRFIP1-201ENST00000244815 VPS13DQ5THJ4 4388 aa6.74□□□□□ -1.33
LRRFIP1-201ENST00000244815 DNAH17Q9UFH2 4485 aa6.73□□□□□ -1.33
LRRFIP1-201ENST00000244815 LRP1BQ9NZR2 4599 aa6.71□□□□□ -1.34
LRRFIP1-201ENST00000244815 KRTAP4-1Q9BYQ7 146 aa6.68□□□□□ -1.34
LRRFIP1-201ENST00000244815 DYNC1H1Q14204 4646 aaKnown RBP6.68□□□□□ -1.34
LRRFIP1-201ENST00000244815 STARD9Q9P2P6 4700 aa6.66□□□□□ -1.34
LRRFIP1-201ENST00000244815 DNAH2Q9P225 4427 aa6.66□□□□□ -1.34
LRRFIP1-201ENST00000244815 ALMS1Q8TCU4 4167 aa6.65□□□□□ -1.34
LRRFIP1-201ENST00000244815 RYR1P21817 5038 aa6.6□□□□□ -1.35
LRRFIP1-201ENST00000244815 PRKDCP78527 4128 aaKnown RBP6.57□□□□□ -1.36
LRRFIP1-201ENST00000244815 MYCBP2O75592 4640 aa6.55□□□□□ -1.36
LRRFIP1-201ENST00000244815 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
LRRFIP1-201ENST00000244815 SACSQ9NZJ4 4579 aa6.52□□□□□ -1.37
LRRFIP1-201ENST00000244815 LYSTQ99698 3801 aa6.43□□□□□ -1.38
LRRFIP1-201ENST00000244815 KIAA1109Q2LD37 5005 aa6.43□□□□□ -1.38
LRRFIP1-201ENST00000244815 ANK2Q01484 3957 aa6.42□□□□□ -1.38
LRRFIP1-201ENST00000244815 KMT2AQ03164 3969 aa6.42□□□□□ -1.38
LRRFIP1-201ENST00000244815 APOBP04114 4563 aaKnown RBP6.41□□□□□ -1.38
LRRFIP1-201ENST00000244815 DYNC2H1Q8NCM8 4307 aaKnown RBP6.4□□□□□ -1.38
LRRFIP1-201ENST00000244815 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
LRRFIP1-201ENST00000244815 DNAH3Q8TD57 4116 aa6.36□□□□□ -1.39
LRRFIP1-201ENST00000244815 VPS13BQ7Z7G8 4022 aa6.35□□□□□ -1.39
LRRFIP1-201ENST00000244815 MT1HP80294 61 aa6.35□□□□□ -1.39
LRRFIP1-201ENST00000244815 FAT2Q9NYQ8 4349 aa6.35□□□□□ -1.39
LRRFIP1-201ENST00000244815 MT2AP02795 61 aa6.35□□□□□ -1.39
LRRFIP1-201ENST00000244815 FAT3Q8TDW7 4589 aa6.28□□□□□ -1.4
LRRFIP1-201ENST00000244815 LRP1Q07954 4544 aaKnown RBP6.26□□□□□ -1.41
LRRFIP1-201ENST00000244815 MT1FP04733 61 aa6.25□□□□□ -1.41
LRRFIP1-201ENST00000244815 RYR3Q15413 4870 aa6.21□□□□□ -1.42
LRRFIP1-201ENST00000244815 KRTAP17-1Q9BYP8 105 aa6.2□□□□□ -1.42
LRRFIP1-201ENST00000244815 KRTAP8-1Q8IUC2 63 aa6.19□□□□□ -1.42
LRRFIP1-201ENST00000244815 KRTAP10-5P60370 271 aa6.17□□□□□ -1.42
LRRFIP1-201ENST00000244815 FRAS1Q86XX4 4008 aa6.16□□□□□ -1.42
LRRFIP1-201ENST00000244815 DNAH6Q9C0G6 4158 aa6.12□□□□□ -1.43
LRRFIP1-201ENST00000244815 CMYA5Q8N3K9 4069 aa6.11□□□□□ -1.43
LRRFIP1-201ENST00000244815 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
LRRFIP1-201ENST00000244815 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
LRRFIP1-201ENST00000244815 LRP2P98164 4655 aa6.05□□□□□ -1.44
LRRFIP1-201ENST00000244815 HECTD4Q9Y4D8 3996 aa6.02□□□□□ -1.45
LRRFIP1-201ENST00000244815 LCE3CQ5T5A8 94 aa5.99□□□□□ -1.45
LRRFIP1-201ENST00000244815 RYR2Q92736 4967 aa5.98□□□□□ -1.45
LRRFIP1-201ENST00000244815 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
LRRFIP1-201ENST00000244815 DNAH7Q8WXX0 4024 aa5.95□□□□□ -1.46
LRRFIP1-201ENST00000244815 HYDINQ4G0P3 5121 aa5.94□□□□□ -1.46
LRRFIP1-201ENST00000244815 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
LRRFIP1-201ENST00000244815 HERC2O95714 4834 aa5.89□□□□□ -1.47
LRRFIP1-201ENST00000244815 KMT2CQ8NEZ4 4911 aaKnown RBP5.88□□□□□ -1.47
LRRFIP1-201ENST00000244815 PKHD1P08F94 4074 aa5.84□□□□□ -1.47
LRRFIP1-201ENST00000244815 MT1XP80297 61 aa5.84□□□□□ -1.47
LRRFIP1-201ENST00000244815 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
LRRFIP1-201ENST00000244815 MT1BP07438 61 aa5.8□□□□□ -1.48
LRRFIP1-201ENST00000244815 KRTAP9-8Q9BYQ0 159 aa5.77□□□□□ -1.49
LRRFIP1-201ENST00000244815 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
LRRFIP1-201ENST00000244815 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
LRRFIP1-201ENST00000244815 LCE2CQ5TA81 110 aa5.74□□□□□ -1.49
LRRFIP1-201ENST00000244815 SPRR2FQ96RM1 72 aa5.74□□□□□ -1.49
LRRFIP1-201ENST00000244815 PKD1P98161 4303 aa5.69□□□□□ -1.5
LRRFIP1-201ENST00000244815 HSPG2P98160 4391 aa5.68□□□□□ -1.5
LRRFIP1-201ENST00000244815 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
LRRFIP1-201ENST00000244815 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
LRRFIP1-201ENST00000244815 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
LRRFIP1-201ENST00000244815 LPAP08519 4548 aa5.62□□□□□ -1.51
LRRFIP1-201ENST00000244815 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
LRRFIP1-201ENST00000244815 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.52
LRRFIP1-201ENST00000244815 EPPK1P58107 5090 aaKnown RBP5.58□□□□□ -1.52
LRRFIP1-201ENST00000244815 SYNE1Q8NF91 8797 aaKnown RBP5.57□□□□□ -1.52
LRRFIP1-201ENST00000244815 HERC1Q15751 4861 aa5.53□□□□□ -1.52
LRRFIP1-201ENST00000244815 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
LRRFIP1-201ENST00000244815 MT1GP13640 62 aa5.47□□□□□ -1.53
LRRFIP1-201ENST00000244815 KRTAP12-4P60329 112 aa5.46□□□□□ -1.53
LRRFIP1-201ENST00000244815 ABCA13Q86UQ4 5058 aa5.46□□□□□ -1.54
LRRFIP1-201ENST00000244815 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
LRRFIP1-201ENST00000244815 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
LRRFIP1-201ENST00000244815 LCE2BO14633 110 aa5.35□□□□□ -1.55
LRRFIP1-201ENST00000244815 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.55
LRRFIP1-201ENST00000244815 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.56
LRRFIP1-201ENST00000244815 TNXBP22105 4242 aa5.34□□□□□ -1.56
LRRFIP1-201ENST00000244815 PKHD1L1Q86WI1 4243 aa5.3□□□□□ -1.56
LRRFIP1-201ENST00000244815 MT1LQ93083 61 aa5.26□□□□□ -1.57
LRRFIP1-201ENST00000244815 SPRR2EP22531 72 aa5.23□□□□□ -1.57
LRRFIP1-201ENST00000244815 SPRR2BP35325 72 aa5.23□□□□□ -1.57
LRRFIP1-201ENST00000244815 SPRR2AP35326 72 aa5.23□□□□□ -1.57
LRRFIP1-201ENST00000244815 MT1EP04732 61 aa5.21□□□□□ -1.58
LRRFIP1-201ENST00000244815 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
LRRFIP1-201ENST00000244815 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
LRRFIP1-201ENST00000244815 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
LRRFIP1-201ENST00000244815 HMCN2Q8NDA2 5059 aa5.14□□□□□ -1.59
LRRFIP1-201ENST00000244815 FAT4Q6V0I7 4981 aa5.13□□□□□ -1.59
LRRFIP1-201ENST00000244815 LCE3EQ5T5B0 92 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms