RNA–Protein interactions for RNA: ENST00000240100.6

DUSP4-201, Transcript of dual specificity phosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP4, Length 5,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-201ENST00000240100 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.23
DUSP4-201ENST00000240100 DNAH2Q9P225 4427 aa7.36□□□□□ -1.23
DUSP4-201ENST00000240100 DNAH17Q9UFH2 4485 aa7.36□□□□□ -1.23
DUSP4-201ENST00000240100 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
DUSP4-201ENST00000240100 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
DUSP4-201ENST00000240100 VPS13DQ5THJ4 4388 aa7.3□□□□□ -1.24
DUSP4-201ENST00000240100 DNAH10Q8IVF4 4471 aa7.3□□□□□ -1.24
DUSP4-201ENST00000240100 PLECQ15149 4684 aaKnown RBP7.28□□□□□ -1.24
DUSP4-201ENST00000240100 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
DUSP4-201ENST00000240100 ZNF469Q96JG9 3925 aaPredicted RBP7.28□□□□□ -1.24
DUSP4-201ENST00000240100 DNAH3Q8TD57 4116 aa7.26□□□□□ -1.25
DUSP4-201ENST00000240100 DNAH11Q96DT5 4516 aa7.23□□□□□ -1.25
DUSP4-201ENST00000240100 CSMD3Q7Z407 3707 aa7.12□□□□□ -1.27
DUSP4-201ENST00000240100 KRTAP4-1Q9BYQ7 146 aa7.08□□□□□ -1.28
DUSP4-201ENST00000240100 DYNC2H1Q8NCM8 4307 aaKnown RBP7.06□□□□□ -1.28
DUSP4-201ENST00000240100 DNHD1Q96M86 4753 aa7.02□□□□□ -1.29
DUSP4-201ENST00000240100 DNAH8Q96JB1 4490 aa7.01□□□□□ -1.29
DUSP4-201ENST00000240100 SACSQ9NZJ4 4579 aa7□□□□□ -1.29
DUSP4-201ENST00000240100 DYNC1H1Q14204 4646 aaKnown RBP6.99□□□□□ -1.29
DUSP4-201ENST00000240100 CRCT1Q9UGL9 99 aa6.99□□□□□ -1.29
DUSP4-201ENST00000240100 STARD9Q9P2P6 4700 aa6.96□□□□□ -1.3
DUSP4-201ENST00000240100 FAT2Q9NYQ8 4349 aa6.94□□□□□ -1.3
DUSP4-201ENST00000240100 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
DUSP4-201ENST00000240100 LRP1BQ9NZR2 4599 aa6.94□□□□□ -1.3
DUSP4-201ENST00000240100 MT1HP80294 61 aa6.91□□□□□ -1.3
DUSP4-201ENST00000240100 DNAH6Q9C0G6 4158 aa6.89□□□□□ -1.31
DUSP4-201ENST00000240100 ANK2Q01484 3957 aa6.88□□□□□ -1.31
DUSP4-201ENST00000240100 MT2AP02795 61 aa6.84□□□□□ -1.32
DUSP4-201ENST00000240100 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
DUSP4-201ENST00000240100 PRKDCP78527 4128 aaKnown RBP6.73□□□□□ -1.33
DUSP4-201ENST00000240100 FAT1Q14517 4588 aa6.73□□□□□ -1.33
DUSP4-201ENST00000240100 CMYA5Q8N3K9 4069 aa6.7□□□□□ -1.34
DUSP4-201ENST00000240100 MT1FP04733 61 aa6.69□□□□□ -1.34
DUSP4-201ENST00000240100 DNAH7Q8WXX0 4024 aa6.69□□□□□ -1.34
DUSP4-201ENST00000240100 VPS13BQ7Z7G8 4022 aa6.69□□□□□ -1.34
DUSP4-201ENST00000240100 KMT2AQ03164 3969 aa6.66□□□□□ -1.34
DUSP4-201ENST00000240100 KRTAP10-5P60370 271 aa6.63□□□□□ -1.35
DUSP4-201ENST00000240100 APOBP04114 4563 aaKnown RBP6.63□□□□□ -1.35
DUSP4-201ENST00000240100 RYR1P21817 5038 aa6.63□□□□□ -1.35
DUSP4-201ENST00000240100 KRTAP19-5Q3LI72 72 aa6.56□□□□□ -1.36
DUSP4-201ENST00000240100 HECTD4Q9Y4D8 3996 aa6.55□□□□□ -1.36
DUSP4-201ENST00000240100 FRAS1Q86XX4 4008 aa6.54□□□□□ -1.36
DUSP4-201ENST00000240100 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
DUSP4-201ENST00000240100 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
DUSP4-201ENST00000240100 RYR3Q15413 4870 aa6.48□□□□□ -1.37
DUSP4-201ENST00000240100 KRTAP19-8Q3LI54 63 aa6.47□□□□□ -1.37
DUSP4-201ENST00000240100 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
DUSP4-201ENST00000240100 FAT3Q8TDW7 4589 aa6.43□□□□□ -1.38
DUSP4-201ENST00000240100 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
DUSP4-201ENST00000240100 RYR2Q92736 4967 aa6.41□□□□□ -1.38
DUSP4-201ENST00000240100 KRTAP10-7P60409 375 aaPredicted RBP6.33□□□□□ -1.4
DUSP4-201ENST00000240100 LYSTQ99698 3801 aa6.32□□□□□ -1.4
DUSP4-201ENST00000240100 HSPG2P98160 4391 aa6.3□□□□□ -1.4
DUSP4-201ENST00000240100 KIAA1109Q2LD37 5005 aa6.3□□□□□ -1.4
DUSP4-201ENST00000240100 BIRC6Q9NR09 4857 aa6.28□□□□□ -1.4
DUSP4-201ENST00000240100 MT1XP80297 61 aa6.28□□□□□ -1.4
DUSP4-201ENST00000240100 MYCBP2O75592 4640 aa6.27□□□□□ -1.41
DUSP4-201ENST00000240100 SPRR5A0A1B0GTR4 108 aa6.27□□□□□ -1.41
DUSP4-201ENST00000240100 HERC1Q15751 4861 aa6.23□□□□□ -1.41
DUSP4-201ENST00000240100 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
DUSP4-201ENST00000240100 LRP1Q07954 4544 aaKnown RBP6.2□□□□□ -1.42
DUSP4-201ENST00000240100 MT1BP07438 61 aa6.2□□□□□ -1.42
DUSP4-201ENST00000240100 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
DUSP4-201ENST00000240100 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
DUSP4-201ENST00000240100 PKHD1L1Q86WI1 4243 aa6.1□□□□□ -1.43
DUSP4-201ENST00000240100 HERC2O95714 4834 aa6.08□□□□□ -1.44
DUSP4-201ENST00000240100 HYDINQ4G0P3 5121 aa6.03□□□□□ -1.44
DUSP4-201ENST00000240100 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
DUSP4-201ENST00000240100 PKD1P98161 4303 aa6□□□□□ -1.45
DUSP4-201ENST00000240100 PKHD1P08F94 4074 aa5.94□□□□□ -1.46
DUSP4-201ENST00000240100 TNXBP22105 4242 aa5.94□□□□□ -1.46
DUSP4-201ENST00000240100 SPRR2EP22531 72 aa5.93□□□□□ -1.46
DUSP4-201ENST00000240100 SPRR2BP35325 72 aa5.93□□□□□ -1.46
DUSP4-201ENST00000240100 SPRR2AP35326 72 aa5.93□□□□□ -1.46
DUSP4-201ENST00000240100 KRTAP19-2Q3LHN2 52 aa5.91□□□□□ -1.46
DUSP4-201ENST00000240100 MT1GP13640 62 aa5.87□□□□□ -1.47
DUSP4-201ENST00000240100 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
DUSP4-201ENST00000240100 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
DUSP4-201ENST00000240100 LRP2P98164 4655 aa5.86□□□□□ -1.47
DUSP4-201ENST00000240100 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
DUSP4-201ENST00000240100 PCLOQ9Y6V0 5065 aa5.81□□□□□ -1.48
DUSP4-201ENST00000240100 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
DUSP4-201ENST00000240100 LPAP08519 4548 aa5.77□□□□□ -1.49
DUSP4-201ENST00000240100 MUC17Q685J3 4493 aa5.76□□□□□ -1.49
DUSP4-201ENST00000240100 SPRR2DP22532 72 aa5.75□□□□□ -1.49
DUSP4-201ENST00000240100 LCE2BO14633 110 aa5.71□□□□□ -1.49
DUSP4-201ENST00000240100 FLGP20930 4061 aaPredicted RBP5.7□□□□□ -1.5
DUSP4-201ENST00000240100 MT1LQ93083 61 aa5.68□□□□□ -1.5
DUSP4-201ENST00000240100 KMT2CQ8NEZ4 4911 aaKnown RBP5.66□□□□□ -1.5
DUSP4-201ENST00000240100 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
DUSP4-201ENST00000240100 MT1EP04732 61 aa5.63□□□□□ -1.51
DUSP4-201ENST00000240100 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
DUSP4-201ENST00000240100 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
DUSP4-201ENST00000240100 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
DUSP4-201ENST00000240100 EPPK1P58107 5090 aaKnown RBP5.52□□□□□ -1.53
DUSP4-201ENST00000240100 KRTAP9-2Q9BYQ4 174 aa5.51□□□□□ -1.53
DUSP4-201ENST00000240100 KRTAP19-6Q3LI70 58 aa5.51□□□□□ -1.53
DUSP4-201ENST00000240100 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
DUSP4-201ENST00000240100 ABCA13Q86UQ4 5058 aa5.49□□□□□ -1.53
DUSP4-201ENST00000240100 LCE2AQ5TA79 106 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms