RNA–Protein interactions for RNA: ENST00000233838.8

GGCX-201, Transcript of gamma-glutamyl carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGCX, Length 7,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-201ENST00000233838 DNAH9Q9NYC9 4486 aa3.41□□□□□ -1.86
GGCX-201ENST00000233838 MEGF8Q7Z7M0 2845 aa3.39□□□□□ -1.87
GGCX-201ENST00000233838 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
GGCX-201ENST00000233838 DNAH1Q9P2D7 4330 aa3.36□□□□□ -1.87
GGCX-201ENST00000233838 KRTAP23-1A1A580 65 aa3.35□□□□□ -1.87
GGCX-201ENST00000233838 LORP23490 312 aaPredicted RBP3.34□□□□□ -1.87
GGCX-201ENST00000233838 SRRM2Q9UQ35 2752 aaKnown RBP3.31□□□□□ -1.88
GGCX-201ENST00000233838 CSMD3Q7Z407 3707 aa3.31□□□□□ -1.88
GGCX-201ENST00000233838 VPS13DQ5THJ4 4388 aa3.29□□□□□ -1.88
GGCX-201ENST00000233838 COL7A1Q02388 2944 aa3.28□□□□□ -1.88
GGCX-201ENST00000233838 DNAH17Q9UFH2 4485 aa3.28□□□□□ -1.88
GGCX-201ENST00000233838 CMYA5Q8N3K9 4069 aa3.27□□□□□ -1.89
GGCX-201ENST00000233838 DNAH10Q8IVF4 4471 aa3.27□□□□□ -1.89
GGCX-201ENST00000233838 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
GGCX-201ENST00000233838 PLECQ15149 4684 aaKnown RBP3.25□□□□□ -1.89
GGCX-201ENST00000233838 DNAH2Q9P225 4427 aa3.24□□□□□ -1.89
GGCX-201ENST00000233838 DNAH11Q96DT5 4516 aa3.22□□□□□ -1.89
GGCX-201ENST00000233838 ANK2Q01484 3957 aa3.22□□□□□ -1.89
GGCX-201ENST00000233838 DYNC2H1Q8NCM8 4307 aaKnown RBP3.21□□□□□ -1.9
GGCX-201ENST00000233838 DNAH7Q8WXX0 4024 aa3.17□□□□□ -1.9
GGCX-201ENST00000233838 DNAH5Q8TE73 4624 aa3.16□□□□□ -1.9
GGCX-201ENST00000233838 DNAH8Q96JB1 4490 aa3.15□□□□□ -1.9
GGCX-201ENST00000233838 STARD9Q9P2P6 4700 aa3.15□□□□□ -1.91
GGCX-201ENST00000233838 FAT2Q9NYQ8 4349 aa3.15□□□□□ -1.91
GGCX-201ENST00000233838 MT1HP80294 61 aa3.14□□□□□ -1.91
GGCX-201ENST00000233838 HECTD4Q9Y4D8 3996 aa3.13□□□□□ -1.91
GGCX-201ENST00000233838 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
GGCX-201ENST00000233838 DNHD1Q96M86 4753 aa3.12□□□□□ -1.91
GGCX-201ENST00000233838 KMT2AQ03164 3969 aa3.12□□□□□ -1.91
GGCX-201ENST00000233838 PRKDCP78527 4128 aaKnown RBP3.12□□□□□ -1.91
GGCX-201ENST00000233838 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
GGCX-201ENST00000233838 FRAS1Q86XX4 4008 aa3.11□□□□□ -1.91
GGCX-201ENST00000233838 VPS13BQ7Z7G8 4022 aa3.1□□□□□ -1.91
GGCX-201ENST00000233838 KRTAP4-1Q9BYQ7 146 aa3.1□□□□□ -1.91
GGCX-201ENST00000233838 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
GGCX-201ENST00000233838 SACSQ9NZJ4 4579 aa3.07□□□□□ -1.92
GGCX-201ENST00000233838 LRP1BQ9NZR2 4599 aa3.06□□□□□ -1.92
GGCX-201ENST00000233838 MT2AP02795 61 aa3.05□□□□□ -1.92
GGCX-201ENST00000233838 DYNC1H1Q14204 4646 aaKnown RBP3.05□□□□□ -1.92
GGCX-201ENST00000233838 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
GGCX-201ENST00000233838 LYSTQ99698 3801 aa3.02□□□□□ -1.93
GGCX-201ENST00000233838 SPRR2GQ9BYE4 73 aa3.02□□□□□ -1.93
GGCX-201ENST00000233838 MT1FP04733 61 aa2.99□□□□□ -1.93
GGCX-201ENST00000233838 SPRR2EP22531 72 aa2.98□□□□□ -1.93
GGCX-201ENST00000233838 SPRR2BP35325 72 aa2.98□□□□□ -1.93
GGCX-201ENST00000233838 SPRR2AP35326 72 aa2.98□□□□□ -1.93
GGCX-201ENST00000233838 LCE3BQ5TA77 95 aa2.94□□□□□ -1.94
GGCX-201ENST00000233838 FAT1Q14517 4588 aa2.9□□□□□ -1.95
GGCX-201ENST00000233838 KRTAP19-4Q3LI73 84 aa2.89□□□□□ -1.95
GGCX-201ENST00000233838 APOBP04114 4563 aaKnown RBP2.88□□□□□ -1.95
GGCX-201ENST00000233838 SPRR2DP22532 72 aa2.88□□□□□ -1.95
GGCX-201ENST00000233838 PKHD1L1Q86WI1 4243 aa2.86□□□□□ -1.95
GGCX-201ENST00000233838 MT1GP13640 62 aa2.85□□□□□ -1.95
GGCX-201ENST00000233838 FAT3Q8TDW7 4589 aa2.84□□□□□ -1.95
GGCX-201ENST00000233838 LCE2BO14633 110 aa2.83□□□□□ -1.96
GGCX-201ENST00000233838 PKD1P98161 4303 aa2.83□□□□□ -1.96
GGCX-201ENST00000233838 PKHD1P08F94 4074 aa2.81□□□□□ -1.96
GGCX-201ENST00000233838 KRTAP17-1Q9BYP8 105 aa2.81□□□□□ -1.96
GGCX-201ENST00000233838 RYR1P21817 5038 aa2.81□□□□□ -1.96
GGCX-201ENST00000233838 KIAA1109Q2LD37 5005 aa2.8□□□□□ -1.96
GGCX-201ENST00000233838 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
GGCX-201ENST00000233838 RYR3Q15413 4870 aa2.79□□□□□ -1.96
GGCX-201ENST00000233838 KRTAP19-8Q3LI54 63 aa2.79□□□□□ -1.96
GGCX-201ENST00000233838 TNXBP22105 4242 aa2.78□□□□□ -1.96
GGCX-201ENST00000233838 HSPG2P98160 4391 aa2.77□□□□□ -1.97
GGCX-201ENST00000233838 RYR2Q92736 4967 aa2.76□□□□□ -1.97
GGCX-201ENST00000233838 KRTAP19-1Q8IUB9 90 aa2.76□□□□□ -1.97
GGCX-201ENST00000233838 MT1XP80297 61 aa2.74□□□□□ -1.97
GGCX-201ENST00000233838 MYCBP2O75592 4640 aa2.74□□□□□ -1.97
GGCX-201ENST00000233838 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
GGCX-201ENST00000233838 BIRC6Q9NR09 4857 aa2.71□□□□□ -1.98
GGCX-201ENST00000233838 LRP1Q07954 4544 aaKnown RBP2.71□□□□□ -1.98
GGCX-201ENST00000233838 HYDINQ4G0P3 5121 aa2.71□□□□□ -1.98
GGCX-201ENST00000233838 KRTAP4-8A0A0G2JLE6 195 aa2.7□□□□□ -1.98
GGCX-201ENST00000233838 KRTAP4-8Q9BYQ9 185 aa2.7□□□□□ -1.98
GGCX-201ENST00000233838 SPRR5A0A1B0GTR4 108 aa2.69□□□□□ -1.98
GGCX-201ENST00000233838 KRTAP9-8Q9BYQ0 159 aa2.67□□□□□ -1.98
GGCX-201ENST00000233838 HERC2O95714 4834 aa2.67□□□□□ -1.98
GGCX-201ENST00000233838 MT1BP07438 61 aa2.67□□□□□ -1.98
GGCX-201ENST00000233838 KMT2CQ8NEZ4 4911 aaKnown RBP2.66□□□□□ -1.98
GGCX-201ENST00000233838 LCE2CQ5TA81 110 aa2.65□□□□□ -1.98
GGCX-201ENST00000233838 MUC17Q685J3 4493 aa2.65□□□□□ -1.98
GGCX-201ENST00000233838 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
GGCX-201ENST00000233838 LCE2DQ5TA82 110 aaPredicted RBP2.62□□□□□ -1.99
GGCX-201ENST00000233838 FLGP20930 4061 aaPredicted RBP2.61□□□□□ -1.99
GGCX-201ENST00000233838 HERC1Q15751 4861 aa2.61□□□□□ -1.99
GGCX-201ENST00000233838 KRTAP9-3Q9BYQ3 159 aa2.61□□□□□ -1.99
GGCX-201ENST00000233838 LPAP08519 4548 aa2.6□□□□□ -1.99
GGCX-201ENST00000233838 KRTAP19-2Q3LHN2 52 aa2.58□□□□□ -2
GGCX-201ENST00000233838 MT4P47944 62 aa2.57□□□□□ -2
GGCX-201ENST00000233838 KRTAP4-7Q9BYR0 210 aa2.57□□□□□ -2
GGCX-201ENST00000233838 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
GGCX-201ENST00000233838 LRP2P98164 4655 aa2.55□□□□□ -2
GGCX-201ENST00000233838 EPPK1P58107 5090 aaKnown RBP2.53□□□□□ -2
GGCX-201ENST00000233838 PRM1P04553 51 aa2.53□□□□□ -2
GGCX-201ENST00000233838 MT1LQ93083 61 aa2.51□□□□□ -2.01
GGCX-201ENST00000233838 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
GGCX-201ENST00000233838 MT1EP04732 61 aa2.48□□□□□ -2.01
GGCX-201ENST00000233838 LOC100996750A0A140TA64 210 aa2.48□□□□□ -2.01
GGCX-201ENST00000233838 MT3P25713 68 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms