RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 AKAP9Q99996 3911 aa2.77□□□□□ -1.97
CPS1-201ENST00000233072 CMYA5Q8N3K9 4069 aa2.77□□□□□ -1.97
CPS1-201ENST00000233072 LAMA5O15230 3695 aa2.76□□□□□ -1.97
CPS1-201ENST00000233072 HERC1Q15751 4861 aa2.76□□□□□ -1.97
CPS1-201ENST00000233072 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
CPS1-201ENST00000233072 SPENQ96T58 3664 aaKnown RBP2.74□□□□□ -1.97
CPS1-201ENST00000233072 OTOGQ6ZRI0 2925 aa2.74□□□□□ -1.97
CPS1-201ENST00000233072 MT1FP04733 61 aa2.74□□□□□ -1.97
CPS1-201ENST00000233072 VPS13DQ5THJ4 4388 aa2.73□□□□□ -1.97
CPS1-201ENST00000233072 LCE2DQ5TA82 110 aaPredicted RBP2.72□□□□□ -1.97
CPS1-201ENST00000233072 NBPF19A0A087WUL8 3843 aa2.71□□□□□ -1.97
CPS1-201ENST00000233072 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
CPS1-201ENST00000233072 DNAH8Q96JB1 4490 aa2.71□□□□□ -1.98
CPS1-201ENST00000233072 DYNC2H1Q8NCM8 4307 aaKnown RBP2.71□□□□□ -1.98
CPS1-201ENST00000233072 ZFHX3Q15911 3703 aa2.71□□□□□ -1.98
CPS1-201ENST00000233072 MYCBP2O75592 4640 aa2.7□□□□□ -1.98
CPS1-201ENST00000233072 DNAH5Q8TE73 4624 aa2.69□□□□□ -1.98
CPS1-201ENST00000233072 HSPG2P98160 4391 aa2.68□□□□□ -1.98
CPS1-201ENST00000233072 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
CPS1-201ENST00000233072 SACSQ9NZJ4 4579 aa2.68□□□□□ -1.98
CPS1-201ENST00000233072 DNHD1Q96M86 4753 aa2.67□□□□□ -1.98
CPS1-201ENST00000233072 FAT2Q9NYQ8 4349 aa2.67□□□□□ -1.98
CPS1-201ENST00000233072 PLECQ15149 4684 aaKnown RBP2.67□□□□□ -1.98
CPS1-201ENST00000233072 FBN1P35555 2871 aaKnown RBP2.66□□□□□ -1.98
CPS1-201ENST00000233072 DNAH7Q8WXX0 4024 aa2.65□□□□□ -1.98
CPS1-201ENST00000233072 RELNP78509 3460 aa2.65□□□□□ -1.99
CPS1-201ENST00000233072 VWFP04275 2813 aa2.64□□□□□ -1.99
CPS1-201ENST00000233072 MEGF8Q7Z7M0 2845 aa2.64□□□□□ -1.99
CPS1-201ENST00000233072 SPRR2EP22531 72 aa2.61□□□□□ -1.99
CPS1-201ENST00000233072 SPRR2BP35325 72 aa2.61□□□□□ -1.99
CPS1-201ENST00000233072 SPRR2AP35326 72 aa2.61□□□□□ -1.99
CPS1-201ENST00000233072 TRRAPQ9Y4A5 3859 aa2.6□□□□□ -1.99
CPS1-201ENST00000233072 CUBNO60494 3623 aa2.59□□□□□ -1.99
CPS1-201ENST00000233072 FBN3Q75N90 2809 aa2.58□□□□□ -2
CPS1-201ENST00000233072 PRKDCP78527 4128 aaKnown RBP2.57□□□□□ -2
CPS1-201ENST00000233072 PKD1L1Q8TDX9 2849 aa2.56□□□□□ -2
CPS1-201ENST00000233072 SPRR2DP22532 72 aa2.55□□□□□ -2
CPS1-201ENST00000233072 CSMD1Q96PZ7 3565 aa2.55□□□□□ -2
CPS1-201ENST00000233072 FAT1Q14517 4588 aa2.55□□□□□ -2
CPS1-201ENST00000233072 MT1XP80297 61 aa2.55□□□□□ -2
CPS1-201ENST00000233072 ZNF469Q96JG9 3925 aaPredicted RBP2.54□□□□□ -2
CPS1-201ENST00000233072 LRP1BQ9NZR2 4599 aa2.54□□□□□ -2
CPS1-201ENST00000233072 KRTAP19-1Q8IUB9 90 aa2.54□□□□□ -2
CPS1-201ENST00000233072 LCE2BO14633 110 aa2.53□□□□□ -2
CPS1-201ENST00000233072 APOBP04114 4563 aaKnown RBP2.53□□□□□ -2.01
CPS1-201ENST00000233072 ANK2Q01484 3957 aa2.52□□□□□ -2.01
CPS1-201ENST00000233072 LRP1Q07954 4544 aaKnown RBP2.52□□□□□ -2.01
CPS1-201ENST00000233072 MT1GP13640 62 aa2.51□□□□□ -2.01
CPS1-201ENST00000233072 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
CPS1-201ENST00000233072 CSMD2Q7Z408 3487 aa2.5□□□□□ -2.01
CPS1-201ENST00000233072 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
CPS1-201ENST00000233072 MT1BP07438 61 aa2.5□□□□□ -2.01
CPS1-201ENST00000233072 FAT3Q8TDW7 4589 aa2.49□□□□□ -2.01
CPS1-201ENST00000233072 FRAS1Q86XX4 4008 aa2.49□□□□□ -2.01
CPS1-201ENST00000233072 LCE3BQ5TA77 95 aa2.48□□□□□ -2.01
CPS1-201ENST00000233072 SVEP1Q4LDE5 3571 aa2.48□□□□□ -2.01
CPS1-201ENST00000233072 KRTAP9-8Q9BYQ0 159 aa2.46□□□□□ -2.02
CPS1-201ENST00000233072 PKHD1L1Q86WI1 4243 aa2.46□□□□□ -2.02
CPS1-201ENST00000233072 STARD9Q9P2P6 4700 aa2.46□□□□□ -2.02
CPS1-201ENST00000233072 MUC17Q685J3 4493 aa2.46□□□□□ -2.02
CPS1-201ENST00000233072 VPS13CQ709C8 3753 aa2.44□□□□□ -2.02
CPS1-201ENST00000233072 KRTAP9-3Q9BYQ3 159 aa2.44□□□□□ -2.02
CPS1-201ENST00000233072 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
CPS1-201ENST00000233072 KRTAP17-1Q9BYP8 105 aa2.4□□□□□ -2.03
CPS1-201ENST00000233072 RYR2Q92736 4967 aa2.4□□□□□ -2.03
CPS1-201ENST00000233072 PKD1P98161 4303 aa2.4□□□□□ -2.03
CPS1-201ENST00000233072 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
CPS1-201ENST00000233072 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
CPS1-201ENST00000233072 LCE2CQ5TA81 110 aa2.38□□□□□ -2.03
CPS1-201ENST00000233072 KMT2CQ8NEZ4 4911 aaKnown RBP2.38□□□□□ -2.03
CPS1-201ENST00000233072 MT1LQ93083 61 aa2.38□□□□□ -2.03
CPS1-201ENST00000233072 HECTD4Q9Y4D8 3996 aa2.38□□□□□ -2.03
CPS1-201ENST00000233072 RYR3Q15413 4870 aa2.38□□□□□ -2.03
CPS1-201ENST00000233072 VPS13BQ7Z7G8 4022 aa2.37□□□□□ -2.03
CPS1-201ENST00000233072 RYR1P21817 5038 aa2.37□□□□□ -2.03
CPS1-201ENST00000233072 COL7A1Q02388 2944 aa2.37□□□□□ -2.03
CPS1-201ENST00000233072 SRRM2Q9UQ35 2752 aaKnown RBP2.37□□□□□ -2.03
CPS1-201ENST00000233072 MT3P25713 68 aa2.36□□□□□ -2.03
CPS1-201ENST00000233072 MT1EP04732 61 aa2.34□□□□□ -2.04
CPS1-201ENST00000233072 LOC100996750A0A140TA64 210 aa2.33□□□□□ -2.04
CPS1-201ENST00000233072 KRTAP4-6Q9BYQ5 205 aa2.33□□□□□ -2.04
CPS1-201ENST00000233072 KRTAP4-8A0A0G2JLE6 195 aa2.32□□□□□ -2.04
CPS1-201ENST00000233072 KRTAP4-8Q9BYQ9 185 aa2.32□□□□□ -2.04
CPS1-201ENST00000233072 BIRC6Q9NR09 4857 aa2.31□□□□□ -2.04
CPS1-201ENST00000233072 KRTAP19-6Q3LI70 58 aa2.28□□□□□ -2.04
CPS1-201ENST00000233072 PCLOQ9Y6V0 5065 aa2.27□□□□□ -2.05
CPS1-201ENST00000233072 PKHD1P08F94 4074 aa2.27□□□□□ -2.05
CPS1-201ENST00000233072 HYDINQ4G0P3 5121 aa2.26□□□□□ -2.05
CPS1-201ENST00000233072 MT1MQ8N339 61 aa2.26□□□□□ -2.05
CPS1-201ENST00000233072 KMT2AQ03164 3969 aa2.26□□□□□ -2.05
CPS1-201ENST00000233072 LYSTQ99698 3801 aa2.25□□□□□ -2.05
CPS1-201ENST00000233072 EPPK1P58107 5090 aaKnown RBP2.25□□□□□ -2.05
CPS1-201ENST00000233072 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
CPS1-201ENST00000233072 CSMD3Q7Z407 3707 aa2.24□□□□□ -2.05
CPS1-201ENST00000233072 HERC2O95714 4834 aa2.24□□□□□ -2.05
CPS1-201ENST00000233072 LRP2P98164 4655 aa2.21□□□□□ -2.06
CPS1-201ENST00000233072 TNXBP22105 4242 aa2.21□□□□□ -2.06
CPS1-201ENST00000233072 PRM1P04553 51 aa2.21□□□□□ -2.06
CPS1-201ENST00000233072 MT1AP04731 61 aa2.16□□□□□ -2.06
CPS1-201ENST00000233072 KRTAP4-7Q9BYR0 210 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms