RNA–Protein interactions for RNA: ENST00000218328.12

HUWE1-201, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene HUWE1, Length 5,488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-201ENST00000218328 ALMS1Q8TCU4 4167 aa7.38□□□□□ -1.23
HUWE1-201ENST00000218328 VPS13CQ709C8 3753 aa7.32□□□□□ -1.24
HUWE1-201ENST00000218328 DNAH5Q8TE73 4624 aa7.23□□□□□ -1.25
HUWE1-201ENST00000218328 DNAH9Q9NYC9 4486 aa7.22□□□□□ -1.25
HUWE1-201ENST00000218328 KRTAP10-5P60370 271 aa7.2□□□□□ -1.26
HUWE1-201ENST00000218328 CSMD3Q7Z407 3707 aa7.2□□□□□ -1.26
HUWE1-201ENST00000218328 DNAH10Q8IVF4 4471 aa7.17□□□□□ -1.26
HUWE1-201ENST00000218328 KRTAP4-1Q9BYQ7 146 aa7.15□□□□□ -1.27
HUWE1-201ENST00000218328 KRTAP8-1Q8IUC2 63 aa7.14□□□□□ -1.27
HUWE1-201ENST00000218328 DNAH1Q9P2D7 4330 aa7.12□□□□□ -1.27
HUWE1-201ENST00000218328 PLECQ15149 4684 aaKnown RBP7.08□□□□□ -1.28
HUWE1-201ENST00000218328 DNAH11Q96DT5 4516 aa7.08□□□□□ -1.28
HUWE1-201ENST00000218328 DNAH2Q9P225 4427 aa7.05□□□□□ -1.28
HUWE1-201ENST00000218328 MT1HP80294 61 aa7□□□□□ -1.29
HUWE1-201ENST00000218328 ZNF469Q96JG9 3925 aaPredicted RBP6.99□□□□□ -1.29
HUWE1-201ENST00000218328 SPRR2GQ9BYE4 73 aa6.99□□□□□ -1.29
HUWE1-201ENST00000218328 MT2AP02795 61 aa6.96□□□□□ -1.3
HUWE1-201ENST00000218328 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
HUWE1-201ENST00000218328 DNHD1Q96M86 4753 aa6.94□□□□□ -1.3
HUWE1-201ENST00000218328 AKAP9Q99996 3911 aa6.91□□□□□ -1.3
HUWE1-201ENST00000218328 FAT1Q14517 4588 aa6.91□□□□□ -1.3
HUWE1-201ENST00000218328 VPS13DQ5THJ4 4388 aa6.88□□□□□ -1.31
HUWE1-201ENST00000218328 DYNC1H1Q14204 4646 aaKnown RBP6.84□□□□□ -1.31
HUWE1-201ENST00000218328 MT1FP04733 61 aa6.81□□□□□ -1.32
HUWE1-201ENST00000218328 KRTAP19-5Q3LI72 72 aa6.8□□□□□ -1.32
HUWE1-201ENST00000218328 LRP1BQ9NZR2 4599 aa6.77□□□□□ -1.33
HUWE1-201ENST00000218328 DNAH8Q96JB1 4490 aa6.77□□□□□ -1.33
HUWE1-201ENST00000218328 RYR1P21817 5038 aa6.75□□□□□ -1.33
HUWE1-201ENST00000218328 LCE3CQ5T5A8 94 aa6.75□□□□□ -1.33
HUWE1-201ENST00000218328 SACSQ9NZJ4 4579 aa6.74□□□□□ -1.33
HUWE1-201ENST00000218328 STARD9Q9P2P6 4700 aa6.67□□□□□ -1.34
HUWE1-201ENST00000218328 DNAH3Q8TD57 4116 aa6.66□□□□□ -1.34
HUWE1-201ENST00000218328 DYNC2H1Q8NCM8 4307 aaKnown RBP6.63□□□□□ -1.35
HUWE1-201ENST00000218328 FAT2Q9NYQ8 4349 aa6.62□□□□□ -1.35
HUWE1-201ENST00000218328 KRTAP10-7P60409 375 aaPredicted RBP6.6□□□□□ -1.35
HUWE1-201ENST00000218328 SPRR2FQ96RM1 72 aa6.59□□□□□ -1.36
HUWE1-201ENST00000218328 APOBP04114 4563 aaKnown RBP6.56□□□□□ -1.36
HUWE1-201ENST00000218328 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
HUWE1-201ENST00000218328 ANK2Q01484 3957 aa6.51□□□□□ -1.37
HUWE1-201ENST00000218328 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.37
HUWE1-201ENST00000218328 KRTAP19-8Q3LI54 63 aa6.45□□□□□ -1.38
HUWE1-201ENST00000218328 PRKDCP78527 4128 aaKnown RBP6.45□□□□□ -1.38
HUWE1-201ENST00000218328 VPS13BQ7Z7G8 4022 aa6.4□□□□□ -1.39
HUWE1-201ENST00000218328 RYR3Q15413 4870 aa6.39□□□□□ -1.39
HUWE1-201ENST00000218328 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
HUWE1-201ENST00000218328 KMT2AQ03164 3969 aa6.35□□□□□ -1.39
HUWE1-201ENST00000218328 KIAA1109Q2LD37 5005 aa6.34□□□□□ -1.39
HUWE1-201ENST00000218328 MT1XP80297 61 aa6.33□□□□□ -1.4
HUWE1-201ENST00000218328 MYCBP2O75592 4640 aa6.31□□□□□ -1.4
HUWE1-201ENST00000218328 LYSTQ99698 3801 aa6.29□□□□□ -1.4
HUWE1-201ENST00000218328 LRP1Q07954 4544 aaKnown RBP6.25□□□□□ -1.41
HUWE1-201ENST00000218328 SPRR5A0A1B0GTR4 108 aa6.24□□□□□ -1.41
HUWE1-201ENST00000218328 FAT3Q8TDW7 4589 aa6.24□□□□□ -1.41
HUWE1-201ENST00000218328 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
HUWE1-201ENST00000218328 MT1BP07438 61 aa6.23□□□□□ -1.41
HUWE1-201ENST00000218328 KRTAP12-4P60329 112 aa6.19□□□□□ -1.42
HUWE1-201ENST00000218328 RYR2Q92736 4967 aa6.18□□□□□ -1.42
HUWE1-201ENST00000218328 CMYA5Q8N3K9 4069 aa6.18□□□□□ -1.42
HUWE1-201ENST00000218328 MT1GP13640 62 aa6.17□□□□□ -1.42
HUWE1-201ENST00000218328 DNAH7Q8WXX0 4024 aa6.17□□□□□ -1.42
HUWE1-201ENST00000218328 FRAS1Q86XX4 4008 aa6.15□□□□□ -1.43
HUWE1-201ENST00000218328 KRTAP9-8Q9BYQ0 159 aa6.13□□□□□ -1.43
HUWE1-201ENST00000218328 DNAH6Q9C0G6 4158 aa6.12□□□□□ -1.43
HUWE1-201ENST00000218328 SPRR2EP22531 72 aa6.12□□□□□ -1.43
HUWE1-201ENST00000218328 SPRR2BP35325 72 aa6.12□□□□□ -1.43
HUWE1-201ENST00000218328 SPRR2AP35326 72 aa6.12□□□□□ -1.43
HUWE1-201ENST00000218328 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
HUWE1-201ENST00000218328 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
HUWE1-201ENST00000218328 HECTD4Q9Y4D8 3996 aa6□□□□□ -1.45
HUWE1-201ENST00000218328 KRTAP9-3Q9BYQ3 159 aa5.99□□□□□ -1.45
HUWE1-201ENST00000218328 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
HUWE1-201ENST00000218328 HERC2O95714 4834 aa5.99□□□□□ -1.45
HUWE1-201ENST00000218328 HERC1Q15751 4861 aa5.97□□□□□ -1.45
HUWE1-201ENST00000218328 HSPG2P98160 4391 aa5.95□□□□□ -1.46
HUWE1-201ENST00000218328 LCE3DQ9BYE3 92 aa5.93□□□□□ -1.46
HUWE1-201ENST00000218328 LCE2BO14633 110 aa5.92□□□□□ -1.46
HUWE1-201ENST00000218328 SPRR2DP22532 72 aa5.91□□□□□ -1.46
HUWE1-201ENST00000218328 PKD1P98161 4303 aa5.9□□□□□ -1.46
HUWE1-201ENST00000218328 LRP2P98164 4655 aa5.9□□□□□ -1.47
HUWE1-201ENST00000218328 BIRC6Q9NR09 4857 aa5.87□□□□□ -1.47
HUWE1-201ENST00000218328 PCLOQ9Y6V0 5065 aa5.87□□□□□ -1.47
HUWE1-201ENST00000218328 LCE3EQ5T5B0 92 aa5.85□□□□□ -1.47
HUWE1-201ENST00000218328 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
HUWE1-201ENST00000218328 HYDINQ4G0P3 5121 aa5.78□□□□□ -1.48
HUWE1-201ENST00000218328 MT1LQ93083 61 aa5.77□□□□□ -1.49
HUWE1-201ENST00000218328 KRTAP19-3Q7Z4W3 81 aa5.76□□□□□ -1.49
HUWE1-201ENST00000218328 MT1EP04732 61 aa5.7□□□□□ -1.5
HUWE1-201ENST00000218328 KRTAP19-2Q3LHN2 52 aa5.69□□□□□ -1.5
HUWE1-201ENST00000218328 PKHD1L1Q86WI1 4243 aa5.68□□□□□ -1.5
HUWE1-201ENST00000218328 LPAP08519 4548 aa5.65□□□□□ -1.5
HUWE1-201ENST00000218328 PKHD1P08F94 4074 aa5.65□□□□□ -1.5
HUWE1-201ENST00000218328 EPPK1P58107 5090 aaKnown RBP5.57□□□□□ -1.52
HUWE1-201ENST00000218328 KMT2CQ8NEZ4 4911 aaKnown RBP5.56□□□□□ -1.52
HUWE1-201ENST00000218328 MUC17Q685J3 4493 aa5.53□□□□□ -1.52
HUWE1-201ENST00000218328 MT1MQ8N339 61 aa5.52□□□□□ -1.53
HUWE1-201ENST00000218328 FLGP20930 4061 aaPredicted RBP5.47□□□□□ -1.53
HUWE1-201ENST00000218328 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
HUWE1-201ENST00000218328 ABCA13Q86UQ4 5058 aa5.45□□□□□ -1.54
HUWE1-201ENST00000218328 TNXBP22105 4242 aa5.45□□□□□ -1.54
HUWE1-201ENST00000218328 PRM1P04553 51 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms