RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 H3BQ85 93 aa7.74□□□□□ -1.17
SRRM4-204ENST00000641899 TMEM256-PLSCR3K7ERE1 68 aa7.74□□□□□ -1.17
SRRM4-204ENST00000641899 A0A0G2JQZ4 141 aa7.73□□□□□ -1.17
SRRM4-204ENST00000641899 SCGB1A1P11684 91 aa7.73□□□□□ -1.17
SRRM4-204ENST00000641899 FCGBPQ9Y6R7 5405 aaPredicted RBP7.72□□□□□ -1.17
SRRM4-204ENST00000641899 MT-ATP8P03928 68 aa7.72□□□□□ -1.17
SRRM4-204ENST00000641899 KRTAP19-1Q8IUB9 90 aa7.72□□□□□ -1.17
SRRM4-204ENST00000641899 JMJD7-PLA2G4BH0Y9G9 81 aa7.71□□□□□ -1.18
SRRM4-204ENST00000641899 GHRHP01286 108 aa7.71□□□□□ -1.18
SRRM4-204ENST00000641899 Q6JHZ5 121 aa7.7□□□□□ -1.18
SRRM4-204ENST00000641899 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.7□□□□□ -1.18
SRRM4-204ENST00000641899 C14orf132Q9NPU4 83 aa7.7□□□□□ -1.18
SRRM4-204ENST00000641899 Q6ZQY7 126 aa7.68□□□□□ -1.18
SRRM4-204ENST00000641899 Q96NJ1 140 aa7.68□□□□□ -1.18
SRRM4-204ENST00000641899 A0A1B0GV72 72 aa7.67□□□□□ -1.18
SRRM4-204ENST00000641899 TRBV7-7A0A0K0K1E9 115 aa7.66□□□□□ -1.18
SRRM4-204ENST00000641899 FAM236DA0A1B0GTK5 79 aa7.66□□□□□ -1.18
SRRM4-204ENST00000641899 FAM236CP0DP71 79 aa7.66□□□□□ -1.18
SRRM4-204ENST00000641899 C21orf62-AS1Q17RA5 79 aa7.66□□□□□ -1.18
SRRM4-204ENST00000641899 MACF1Q9UPN3 7388 aaKnown RBP7.66□□□□□ -1.18
SRRM4-204ENST00000641899 MT2AP02795 61 aa7.64□□□□□ -1.19
SRRM4-204ENST00000641899 CCKP06307 115 aa7.64□□□□□ -1.19
SRRM4-204ENST00000641899 RBM3P98179 157 aaKnown RBP7.64□□□□□ -1.19
SRRM4-204ENST00000641899 SYNE2Q8WXH0 6885 aaKnown RBP7.63□□□□□ -1.19
SRRM4-204ENST00000641899 KRTAP10-10P60014 251 aa7.63□□□□□ -1.19
SRRM4-204ENST00000641899 LINC00643Q86TS7 51 aa7.63□□□□□ -1.19
SRRM4-204ENST00000641899 IGFL1Q6UW32 110 aa7.62□□□□□ -1.19
SRRM4-204ENST00000641899 C20orf166-AS1Q96NR2 134 aa7.61□□□□□ -1.19
SRRM4-204ENST00000641899 LOC110117498A0A087WWA1 95 aa7.6□□□□□ -1.19
SRRM4-204ENST00000641899 LCE2BO14633 110 aa7.6□□□□□ -1.19
SRRM4-204ENST00000641899 PDE6GP18545 87 aa7.6□□□□□ -1.19
SRRM4-204ENST00000641899 DSCR8Q96T75 97 aa7.6□□□□□ -1.19
SRRM4-204ENST00000641899 NDUFV3P56181 108 aaKnown RBP7.59□□□□□ -1.19
SRRM4-204ENST00000641899 RBM12B-AS1Q9P1G2 102 aa7.59□□□□□ -1.19
SRRM4-204ENST00000641899 SS18L2Q9UHA2 77 aa7.59□□□□□ -1.19
SRRM4-204ENST00000641899 A8MUU9 505 aa7.57□□□□□ -1.2
SRRM4-204ENST00000641899 MT1FP04733 61 aa7.57□□□□□ -1.2
SRRM4-204ENST00000641899 Q6ZQT0 140 aa7.57□□□□□ -1.2
SRRM4-204ENST00000641899 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
SRRM4-204ENST00000641899 IMUPQ9GZP8 106 aa7.56□□□□□ -1.2
SRRM4-204ENST00000641899 UBL5Q9BZL1 73 aa7.53□□□□□ -1.2
SRRM4-204ENST00000641899 TRBV7-4A0A0J9YYF1 115 aa7.52□□□□□ -1.21
SRRM4-204ENST00000641899 IGKV3D-7A0A0C4DH55 119 aa7.51□□□□□ -1.21
SRRM4-204ENST00000641899 ATP5EP2Q5VTU8 51 aa7.51□□□□□ -1.21
SRRM4-204ENST00000641899 ANAPC13Q9BS18 74 aa7.5□□□□□ -1.21
SRRM4-204ENST00000641899 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
SRRM4-204ENST00000641899 FAM236AA0A1B0GUQ0 79 aa7.45□□□□□ -1.22
SRRM4-204ENST00000641899 FAM236BA0A1B0GV22 79 aa7.45□□□□□ -1.22
SRRM4-204ENST00000641899 KRTAP6-3Q3LI67 103 aa7.45□□□□□ -1.22
SRRM4-204ENST00000641899 Q6ZVQ6 151 aa7.45□□□□□ -1.22
SRRM4-204ENST00000641899 HIST1H4AP62805 103 aaKnown RBP7.43□□□□□ -1.22
SRRM4-204ENST00000641899 DSCR10P59022 87 aa7.42□□□□□ -1.22
SRRM4-204ENST00000641899 LINC00313P59037 77 aa7.41□□□□□ -1.22
SRRM4-204ENST00000641899 A0A1B0GW54 56 aa7.4□□□□□ -1.22
SRRM4-204ENST00000641899 MPLKIPQ8TAP9 179 aa7.4□□□□□ -1.22
SRRM4-204ENST00000641899 A0A087WSZ3 146 aa7.39□□□□□ -1.23
SRRM4-204ENST00000641899 HRES1P13985 223 aa7.39□□□□□ -1.23
SRRM4-204ENST00000641899 CXCL6P80162 114 aa7.39□□□□□ -1.23
SRRM4-204ENST00000641899 ATOX1O00244 68 aa7.38□□□□□ -1.23
SRRM4-204ENST00000641899 NREPQ16612 68 aa7.38□□□□□ -1.23
SRRM4-204ENST00000641899 A0A087WVE0 104 aa7.37□□□□□ -1.23
SRRM4-204ENST00000641899 A0A1W2PNM2 257 aa7.37□□□□□ -1.23
SRRM4-204ENST00000641899 A8MWP4 228 aa7.35□□□□□ -1.23
SRRM4-204ENST00000641899 KRTAP16-1A8MUX0 517 aa7.33□□□□□ -1.24
SRRM4-204ENST00000641899 CCDC179H3BU77 68 aa7.32□□□□□ -1.24
SRRM4-204ENST00000641899 BPY2O14599 106 aa7.32□□□□□ -1.24
SRRM4-204ENST00000641899 NOTCH2NLQ7Z3S9 236 aa7.32□□□□□ -1.24
SRRM4-204ENST00000641899 IGKV4-1P06312 121 aa7.3□□□□□ -1.24
SRRM4-204ENST00000641899 UQCRQO14949 82 aa7.28□□□□□ -1.24
SRRM4-204ENST00000641899 COX7CP15954 63 aa7.28□□□□□ -1.24
SRRM4-204ENST00000641899 SERP2Q8N6R1 65 aa7.27□□□□□ -1.25
SRRM4-204ENST00000641899 SMIM20Q8N5G0 67 aa7.24□□□□□ -1.25
SRRM4-204ENST00000641899 Q8N9L7 120 aa7.23□□□□□ -1.25
SRRM4-204ENST00000641899 Q8N9P0 234 aaPredicted RBP7.23□□□□□ -1.25
SRRM4-204ENST00000641899 IGHV6-1A0A0B4J1U7 121 aa7.22□□□□□ -1.25
SRRM4-204ENST00000641899 TRAV7A0A075B6U4 112 aa7.21□□□□□ -1.26
SRRM4-204ENST00000641899 SPINK7P58062 85 aa7.21□□□□□ -1.26
SRRM4-204ENST00000641899 NEBP20929 6669 aa7.21□□□□□ -1.26
SRRM4-204ENST00000641899 C8orf87E5RJ46 101 aa7.2□□□□□ -1.26
SRRM4-204ENST00000641899 ZCCHC13Q8WW36 166 aaKnown RBP7.18□□□□□ -1.26
SRRM4-204ENST00000641899 K7EQZ3 153 aa7.15□□□□□ -1.26
SRRM4-204ENST00000641899 DEFB116Q30KQ4 102 aa7.15□□□□□ -1.26
SRRM4-204ENST00000641899 KRTAP20-1Q3LI63 56 aa7.15□□□□□ -1.26
SRRM4-204ENST00000641899 WFDC13Q8IUB5 93 aa7.14□□□□□ -1.27
SRRM4-204ENST00000641899 LINC00472Q9H8W2 130 aa7.14□□□□□ -1.27
SRRM4-204ENST00000641899 J3KT08 172 aa7.13□□□□□ -1.27
SRRM4-204ENST00000641899 A0A1B0GVX0 72 aa7.12□□□□□ -1.27
SRRM4-204ENST00000641899 HCG22E2RYF7 251 aa7.11□□□□□ -1.27
SRRM4-204ENST00000641899 C20orf197Q8N268 126 aa7.11□□□□□ -1.27
SRRM4-204ENST00000641899 NDUFB1O75438 58 aa7.08□□□□□ -1.28
SRRM4-204ENST00000641899 PRR15Q8IV56 129 aa7.08□□□□□ -1.28
SRRM4-204ENST00000641899 OCR1Q9BZK8 76 aa7.08□□□□□ -1.28
SRRM4-204ENST00000641899 A6NN06 94 aa7.06□□□□□ -1.28
SRRM4-204ENST00000641899 CYSTM1Q9H1C7 97 aa7.06□□□□□ -1.28
SRRM4-204ENST00000641899 TMEM258P61165 79 aa7.05□□□□□ -1.28
SRRM4-204ENST00000641899 MUC12Q9UKN1 5478 aa7.05□□□□□ -1.28
SRRM4-204ENST00000641899 KLKP1Q107X0 134 aa7.04□□□□□ -1.28
SRRM4-204ENST00000641899 CASC2Q6XLA1 102 aa7.04□□□□□ -1.28
SRRM4-204ENST00000641899 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
SRRM4-204ENST00000641899 TMEM254Q8TBM7 123 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms