RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 NBDYA0A0U1RRE5 68 aa8.21□□□□□ -1.09
SCARB2-227ENST00000640957 A0A1B0GVX0 72 aa8.21□□□□□ -1.09
SCARB2-227ENST00000640957 PLAC8Q9NZF1 115 aa8.21□□□□□ -1.1
SCARB2-227ENST00000640957 FBN3Q75N90 2809 aa8.21□□□□□ -1.1
SCARB2-227ENST00000640957 CMYA5Q8N3K9 4069 aa8.2□□□□□ -1.1
SCARB2-227ENST00000640957 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
SCARB2-227ENST00000640957 TP53AIP1Q9HCN2 124 aa8.2□□□□□ -1.1
SCARB2-227ENST00000640957 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.19□□□□□ -1.1
SCARB2-227ENST00000640957 LY6G6CO95867 125 aa8.19□□□□□ -1.1
SCARB2-227ENST00000640957 Q6ZR54 194 aa8.18□□□□□ -1.1
SCARB2-227ENST00000640957 CIRBP-AS1Q8TBR5 109 aa8.17□□□□□ -1.1
SCARB2-227ENST00000640957 SPRR1BP22528 89 aa8.16□□□□□ -1.1
SCARB2-227ENST00000640957 A0A1B0GU69 56 aa8.15□□□□□ -1.1
SCARB2-227ENST00000640957 SPINK1P00995 79 aa8.14□□□□□ -1.11
SCARB2-227ENST00000640957 H3BS24 57 aa8.13□□□□□ -1.11
SCARB2-227ENST00000640957 MEGF8Q7Z7M0 2845 aa8.13□□□□□ -1.11
SCARB2-227ENST00000640957 NUPR2A6NF83 97 aa8.11□□□□□ -1.11
SCARB2-227ENST00000640957 RTL8CO15255 209 aa8.11□□□□□ -1.11
SCARB2-227ENST00000640957 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
SCARB2-227ENST00000640957 CSAG1Q6PB30 78 aa8.1□□□□□ -1.11
SCARB2-227ENST00000640957 ACYP2P14621 99 aa8.1□□□□□ -1.11
SCARB2-227ENST00000640957 ASB16-AS1Q495Z4 193 aa8.1□□□□□ -1.11
SCARB2-227ENST00000640957 IGLV5-52A0A0A0MRZ9 124 aa8.08□□□□□ -1.12
SCARB2-227ENST00000640957 WWC2-AS2Q96NR7 200 aa8.07□□□□□ -1.12
SCARB2-227ENST00000640957 PSORS1C2Q9UIG4 136 aa8.07□□□□□ -1.12
SCARB2-227ENST00000640957 IGKV2D-30A0A075B6S6 120 aa8.07□□□□□ -1.12
SCARB2-227ENST00000640957 A0A087WTM6 91 aa8.07□□□□□ -1.12
SCARB2-227ENST00000640957 IGKV2-30P06310 120 aa8.07□□□□□ -1.12
SCARB2-227ENST00000640957 DMBT1Q9UGM3 2413 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-227ENST00000640957 KRTAP13-1Q8IUC0 172 aa8.06□□□□□ -1.12
SCARB2-227ENST00000640957 DNAH8Q96JB1 4490 aa8.05□□□□□ -1.12
SCARB2-227ENST00000640957 PLECQ15149 4684 aaKnown RBP8.05□□□□□ -1.12
SCARB2-227ENST00000640957 MIR22HGQ0VDD5 57 aa8.05□□□□□ -1.12
SCARB2-227ENST00000640957 C1orf134Q5TEV5 83 aa8□□□□□ -1.13
SCARB2-227ENST00000640957 CRIPTQ9P021 101 aa7.99□□□□□ -1.13
SCARB2-227ENST00000640957 SPACA4Q8TDM5 124 aa7.99□□□□□ -1.13
SCARB2-227ENST00000640957 PLA2G1BP04054 148 aaKnown RBP7.98□□□□□ -1.13
SCARB2-227ENST00000640957 DNAH17Q9UFH2 4485 aa7.98□□□□□ -1.13
SCARB2-227ENST00000640957 Q6ZRN7 208 aaPredicted RBP7.97□□□□□ -1.13
SCARB2-227ENST00000640957 DNHD1Q96M86 4753 aa7.97□□□□□ -1.13
SCARB2-227ENST00000640957 UQCR11O14957 56 aa7.97□□□□□ -1.13
SCARB2-227ENST00000640957 ZNF706Q9Y5V0 76 aaPredicted RBP7.96□□□□□ -1.13
SCARB2-227ENST00000640957 PRKDCP78527 4128 aaKnown RBP7.95□□□□□ -1.14
SCARB2-227ENST00000640957 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
SCARB2-227ENST00000640957 Q8N1X5 172 aa7.95□□□□□ -1.14
SCARB2-227ENST00000640957 ZNF861PO60384 105 aa7.94□□□□□ -1.14
SCARB2-227ENST00000640957 DMAC1Q96GE9 116 aa7.94□□□□□ -1.14
SCARB2-227ENST00000640957 STARD9Q9P2P6 4700 aa7.94□□□□□ -1.14
SCARB2-227ENST00000640957 SPATA8Q6RVD6 105 aa7.93□□□□□ -1.14
SCARB2-227ENST00000640957 KMT2AQ03164 3969 aa7.93□□□□□ -1.14
SCARB2-227ENST00000640957 ALMS1Q8TCU4 4167 aa7.92□□□□□ -1.14
SCARB2-227ENST00000640957 DNAH3Q8TD57 4116 aa7.92□□□□□ -1.14
SCARB2-227ENST00000640957 LINC00483Q53H64 154 aa7.9□□□□□ -1.14
SCARB2-227ENST00000640957 KRTAP10-2P60368 255 aa7.87□□□□□ -1.15
SCARB2-227ENST00000640957 IGLV7-43P04211 117 aa7.86□□□□□ -1.15
SCARB2-227ENST00000640957 HECTD4Q9Y4D8 3996 aa7.85□□□□□ -1.15
SCARB2-227ENST00000640957 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
SCARB2-227ENST00000640957 DNAH6Q9C0G6 4158 aa7.82□□□□□ -1.16
SCARB2-227ENST00000640957 SMR3BP02814 79 aaPredicted RBP7.78□□□□□ -1.16
SCARB2-227ENST00000640957 DNAH2Q9P225 4427 aa7.77□□□□□ -1.17
SCARB2-227ENST00000640957 DNAH11Q96DT5 4516 aa7.76□□□□□ -1.17
SCARB2-227ENST00000640957 TYMSOSQ8TAI1 123 aa7.74□□□□□ -1.17
SCARB2-227ENST00000640957 KRTAP10-1P60331 282 aa7.72□□□□□ -1.17
SCARB2-227ENST00000640957 VPS13DQ5THJ4 4388 aa7.72□□□□□ -1.17
SCARB2-227ENST00000640957 KRTAP13-2Q52LG2 175 aa7.72□□□□□ -1.17
SCARB2-227ENST00000640957 H0YAA0 97 aa7.7□□□□□ -1.18
SCARB2-227ENST00000640957 Q6ZSA8 131 aa7.7□□□□□ -1.18
SCARB2-227ENST00000640957 LRP1BQ9NZR2 4599 aa7.69□□□□□ -1.18
SCARB2-227ENST00000640957 SSBP3-AS1Q7Z2R9 100 aa7.67□□□□□ -1.18
SCARB2-227ENST00000640957 LINC00304Q8N9R0 145 aa7.67□□□□□ -1.18
SCARB2-227ENST00000640957 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
SCARB2-227ENST00000640957 C9orf92A6NGG3 77 aa7.63□□□□□ -1.19
SCARB2-227ENST00000640957 KRTAP25-1Q3LHN0 102 aa7.61□□□□□ -1.19
SCARB2-227ENST00000640957 ROMO1P60602 79 aa7.6□□□□□ -1.19
SCARB2-227ENST00000640957 A8MUU9 505 aa7.59□□□□□ -1.19
SCARB2-227ENST00000640957 HYDINQ4G0P3 5121 aa7.58□□□□□ -1.2
SCARB2-227ENST00000640957 A0A1B0GU33 70 aa7.58□□□□□ -1.2
SCARB2-227ENST00000640957 FAT2Q9NYQ8 4349 aa7.53□□□□□ -1.2
SCARB2-227ENST00000640957 VPS13BQ7Z7G8 4022 aa7.53□□□□□ -1.2
SCARB2-227ENST00000640957 DNAH5Q8TE73 4624 aa7.53□□□□□ -1.2
SCARB2-227ENST00000640957 A0A0D9SG42 100 aa7.53□□□□□ -1.2
SCARB2-227ENST00000640957 P0C880 135 aa7.49□□□□□ -1.21
SCARB2-227ENST00000640957 DYNC2H1Q8NCM8 4307 aaKnown RBP7.49□□□□□ -1.21
SCARB2-227ENST00000640957 H1FX-AS1Q4G0G2 97 aa7.46□□□□□ -1.22
SCARB2-227ENST00000640957 KRTAP3-1Q9BYR8 98 aa7.46□□□□□ -1.22
SCARB2-227ENST00000640957 KRTAP1-4P0C5Y4 121 aa7.45□□□□□ -1.22
SCARB2-227ENST00000640957 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
SCARB2-227ENST00000640957 FAT1Q14517 4588 aa7.44□□□□□ -1.22
SCARB2-227ENST00000640957 SPINT4Q6UDR6 99 aa7.44□□□□□ -1.22
SCARB2-227ENST00000640957 PKHD1P08F94 4074 aa7.43□□□□□ -1.22
SCARB2-227ENST00000640957 COX6B2Q6YFQ2 88 aa7.4□□□□□ -1.23
SCARB2-227ENST00000640957 K7ERS5 55 aa7.37□□□□□ -1.23
SCARB2-227ENST00000640957 NDUFAF8A1L188 74 aa7.31□□□□□ -1.24
SCARB2-227ENST00000640957 TPRXLQ17RH7 258 aa7.3□□□□□ -1.24
SCARB2-227ENST00000640957 MYCBP2O75592 4640 aa7.29□□□□□ -1.24
SCARB2-227ENST00000640957 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
SCARB2-227ENST00000640957 DYNC1H1Q14204 4646 aaKnown RBP7.22□□□□□ -1.25
SCARB2-227ENST00000640957 PKD1P98161 4303 aa7.21□□□□□ -1.26
SCARB2-227ENST00000640957 RPL37P61927 97 aaKnown RBP7.2□□□□□ -1.26
SCARB2-227ENST00000640957 KMT2CQ8NEZ4 4911 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms