RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001		Q5XG85	94 aa		4.61	□□□□□ -1.67
HNRNPU-223	ENST00000640001	C7orf65	Q6ZTY9	151 aa		4.6	□□□□□ -1.67
HNRNPU-223	ENST00000640001	SRRM2	Q9UQ35	2752 aa	Known RBP	4.6	□□□□□ -1.67
HNRNPU-223	ENST00000640001	FP248	Q71RG6	208 aa	Predicted RBP	4.6	□□□□□ -1.67
HNRNPU-223	ENST00000640001	COA5	Q86WW8	74 aa		4.59	□□□□□ -1.67
HNRNPU-223	ENST00000640001	LOC101927531	A0A1B0GV80	90 aa		4.59	□□□□□ -1.68
HNRNPU-223	ENST00000640001		Q96NJ1	140 aa		4.58	□□□□□ -1.68
HNRNPU-223	ENST00000640001		A0A087X002	238 aa		4.57	□□□□□ -1.68
HNRNPU-223	ENST00000640001	NOTCH2NL	Q7Z3S9	236 aa		4.57	□□□□□ -1.68
HNRNPU-223	ENST00000640001	FAM229A	H3BQW9	127 aa		4.57	□□□□□ -1.68
HNRNPU-223	ENST00000640001	ZCCHC13	Q8WW36	166 aa	Known RBP	4.57	□□□□□ -1.68
HNRNPU-223	ENST00000640001	LINC00304	Q8N9R0	145 aa		4.57	□□□□□ -1.68
HNRNPU-223	ENST00000640001	SPANXA2-OT1	Q8N9U9	137 aa		4.56	□□□□□ -1.68
HNRNPU-223	ENST00000640001	PRR26	Q8N8Z3	221 aa		4.56	□□□□□ -1.68
HNRNPU-223	ENST00000640001	CYP4F30P	Q9H0H9	118 aa		4.56	□□□□□ -1.68
HNRNPU-223	ENST00000640001	RBM12B-AS1	Q9P1G2	102 aa		4.56	□□□□□ -1.68
HNRNPU-223	ENST00000640001	LCE6A	A0A183	80 aa		4.54	□□□□□ -1.68
HNRNPU-223	ENST00000640001	ACYP2	P14621	99 aa		4.54	□□□□□ -1.68
HNRNPU-223	ENST00000640001	CSMD3	Q7Z407	3707 aa		4.54	□□□□□ -1.68
HNRNPU-223	ENST00000640001	LINC01554	Q52M75	96 aa		4.54	□□□□□ -1.68
HNRNPU-223	ENST00000640001	COL7A1	Q02388	2944 aa		4.53	□□□□□ -1.68
HNRNPU-223	ENST00000640001	UQCR11	O14957	56 aa		4.53	□□□□□ -1.68
HNRNPU-223	ENST00000640001	CRIPT	Q9P021	101 aa		4.53	□□□□□ -1.68
HNRNPU-223	ENST00000640001	C9orf92	A6NGG3	77 aa		4.52	□□□□□ -1.69
HNRNPU-223	ENST00000640001	IGLV7-46	A0A075B6I9	117 aa		4.52	□□□□□ -1.69
HNRNPU-223	ENST00000640001	FBN3	Q75N90	2809 aa		4.52	□□□□□ -1.69
HNRNPU-223	ENST00000640001		Q8N9P0	234 aa	Predicted RBP	4.51	□□□□□ -1.69
HNRNPU-223	ENST00000640001	KRTAP13-2	Q52LG2	175 aa		4.51	□□□□□ -1.69
HNRNPU-223	ENST00000640001	ANK2	Q01484	3957 aa		4.51	□□□□□ -1.69
HNRNPU-223	ENST00000640001	LUZP6	Q538Z0	58 aa		4.5	□□□□□ -1.69
HNRNPU-223	ENST00000640001	MEGF8	Q7Z7M0	2845 aa		4.5	□□□□□ -1.69
HNRNPU-223	ENST00000640001	DNAH9	Q9NYC9	4486 aa		4.49	□□□□□ -1.69
HNRNPU-223	ENST00000640001	MIR22HG	Q0VDD5	57 aa		4.49	□□□□□ -1.69
HNRNPU-223	ENST00000640001		Q5W150	140 aa		4.48	□□□□□ -1.69
HNRNPU-223	ENST00000640001		Q1T7F1	81 aa		4.48	□□□□□ -1.69
HNRNPU-223	ENST00000640001	HRES1	P13985	223 aa		4.48	□□□□□ -1.69
HNRNPU-223	ENST00000640001		Q6ZSA8	131 aa		4.46	□□□□□ -1.7
HNRNPU-223	ENST00000640001	DNAH10	Q8IVF4	4471 aa		4.46	□□□□□ -1.7
HNRNPU-223	ENST00000640001	PRAC1	Q96KF2	57 aa		4.46	□□□□□ -1.7
HNRNPU-223	ENST00000640001		Q8N1X5	172 aa		4.44	□□□□□ -1.7
HNRNPU-223	ENST00000640001	PLEC	Q15149	4684 aa	Known RBP	4.44	□□□□□ -1.7
HNRNPU-223	ENST00000640001	KRTAP21-3	Q3LHN1	58 aa		4.43	□□□□□ -1.7
HNRNPU-223	ENST00000640001	CMYA5	Q8N3K9	4069 aa		4.43	□□□□□ -1.7
HNRNPU-223	ENST00000640001	ASB16-AS1	Q495Z4	193 aa		4.42	□□□□□ -1.7
HNRNPU-223	ENST00000640001		A0A0A0MQY5	61 aa		4.42	□□□□□ -1.7
HNRNPU-223	ENST00000640001	KRTAP1-4	P0C5Y4	121 aa		4.41	□□□□□ -1.7
HNRNPU-223	ENST00000640001	CDC42SE1	Q9NRR8	79 aa		4.41	□□□□□ -1.7
HNRNPU-223	ENST00000640001	DNAH3	Q8TD57	4116 aa		4.41	□□□□□ -1.7
HNRNPU-223	ENST00000640001		Q5VV11	94 aa		4.4	□□□□□ -1.7
HNRNPU-223	ENST00000640001	LINC01558	Q9Y6Z2	57 aa		4.36	□□□□□ -1.71
HNRNPU-223	ENST00000640001	STARD9	Q9P2P6	4700 aa		4.36	□□□□□ -1.71
HNRNPU-223	ENST00000640001		A0A0D9SG42	100 aa		4.35	□□□□□ -1.71
HNRNPU-223	ENST00000640001		Q75L30	129 aa		4.35	□□□□□ -1.71
HNRNPU-223	ENST00000640001	DMAC1	Q96GE9	116 aa		4.35	□□□□□ -1.71
HNRNPU-223	ENST00000640001	LYST	Q99698	3801 aa		4.35	□□□□□ -1.71
HNRNPU-223	ENST00000640001	PRKDC	P78527	4128 aa	Known RBP	4.34	□□□□□ -1.71
HNRNPU-223	ENST00000640001	DNAH1	Q9P2D7	4330 aa		4.34	□□□□□ -1.71
HNRNPU-223	ENST00000640001		Q5VSD8	79 aa		4.34	□□□□□ -1.71
HNRNPU-223	ENST00000640001	CSAG1	Q6PB30	78 aa		4.34	□□□□□ -1.72
HNRNPU-223	ENST00000640001	SPINK7	P58062	85 aa		4.33	□□□□□ -1.72
HNRNPU-223	ENST00000640001	DNHD1	Q96M86	4753 aa		4.33	□□□□□ -1.72
HNRNPU-223	ENST00000640001	KRTAP16-1	A8MUX0	517 aa		4.32	□□□□□ -1.72
HNRNPU-223	ENST00000640001	VPS13D	Q5THJ4	4388 aa		4.31	□□□□□ -1.72
HNRNPU-223	ENST00000640001		A8MU10	97 aa		4.3	□□□□□ -1.72
HNRNPU-223	ENST00000640001	RPS29	P62273	56 aa	Known RBP	4.29	□□□□□ -1.72
HNRNPU-223	ENST00000640001	LCE2D	Q5TA82	110 aa	Predicted RBP	4.27	□□□□□ -1.73
HNRNPU-223	ENST00000640001	KRTAP13-3	Q3SY46	172 aa		4.27	□□□□□ -1.73
HNRNPU-223	ENST00000640001	DNAH7	Q8WXX0	4024 aa		4.26	□□□□□ -1.73
HNRNPU-223	ENST00000640001	DNAH11	Q96DT5	4516 aa		4.25	□□□□□ -1.73
HNRNPU-223	ENST00000640001	KMT2A	Q03164	3969 aa		4.25	□□□□□ -1.73
HNRNPU-223	ENST00000640001		A0A1B0GVY2	172 aa		4.25	□□□□□ -1.73
HNRNPU-223	ENST00000640001	DNAH17	Q9UFH2	4485 aa		4.24	□□□□□ -1.73
HNRNPU-223	ENST00000640001		A8MUU9	505 aa		4.21	□□□□□ -1.74
HNRNPU-223	ENST00000640001	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.21	□□□□□ -1.74
HNRNPU-223	ENST00000640001		J3QL48	77 aa		4.2	□□□□□ -1.74
HNRNPU-223	ENST00000640001	C20orf166-AS1	Q96NR2	134 aa		4.2	□□□□□ -1.74
HNRNPU-223	ENST00000640001		A0A1B0GU33	70 aa		4.19	□□□□□ -1.74
HNRNPU-223	ENST00000640001	DNAH8	Q96JB1	4490 aa		4.18	□□□□□ -1.74
HNRNPU-223	ENST00000640001	DNAH2	Q9P225	4427 aa		4.18	□□□□□ -1.74
HNRNPU-223	ENST00000640001	COX6B2	Q6YFQ2	88 aa		4.18	□□□□□ -1.74
HNRNPU-223	ENST00000640001	NDUFAF8	A1L188	74 aa		4.16	□□□□□ -1.74
HNRNPU-223	ENST00000640001	DNAH5	Q8TE73	4624 aa		4.16	□□□□□ -1.74
HNRNPU-223	ENST00000640001	LRP1B	Q9NZR2	4599 aa		4.16	□□□□□ -1.74
HNRNPU-223	ENST00000640001	ALMS1	Q8TCU4	4167 aa		4.15	□□□□□ -1.74
HNRNPU-223	ENST00000640001	CAMK2N1	Q7Z7J9	78 aa		4.13	□□□□□ -1.75
HNRNPU-223	ENST00000640001	HECTD4	Q9Y4D8	3996 aa		4.12	□□□□□ -1.75
HNRNPU-223	ENST00000640001	RPL37	P61927	97 aa	Known RBP	4.12	□□□□□ -1.75
HNRNPU-223	ENST00000640001		S4R3F8	94 aa		4.12	□□□□□ -1.75
HNRNPU-223	ENST00000640001	SPATA8	Q6RVD6	105 aa		4.12	□□□□□ -1.75
HNRNPU-223	ENST00000640001	FRAS1	Q86XX4	4008 aa		4.12	□□□□□ -1.75
HNRNPU-223	ENST00000640001	DNAH6	Q9C0G6	4158 aa		4.11	□□□□□ -1.75
HNRNPU-223	ENST00000640001		A6NN06	94 aa		4.11	□□□□□ -1.75
HNRNPU-223	ENST00000640001	KRTAP3-3	Q9BYR6	98 aa		4.1	□□□□□ -1.75
HNRNPU-223	ENST00000640001	KRTAP3-2	Q9BYR7	98 aa		4.1	□□□□□ -1.75
HNRNPU-223	ENST00000640001	KRTAP10-4	P60372	401 aa	Predicted RBP	4.1	□□□□□ -1.75
HNRNPU-223	ENST00000640001	KRTAP10-8	P60410	259 aa		4.1	□□□□□ -1.75
HNRNPU-223	ENST00000640001	H1FX-AS1	Q4G0G2	97 aa		4.09	□□□□□ -1.75
HNRNPU-223	ENST00000640001	XP32	Q5T750	250 aa		4.09	□□□□□ -1.75
HNRNPU-223	ENST00000640001	FAT1	Q14517	4588 aa		4.08	□□□□□ -1.76
HNRNPU-223	ENST00000640001	DYNC1H1	Q14204	4646 aa	Known RBP	4.08	□□□□□ -1.76

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