RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 A0A1B0GU69 56 aa4.57□□□□□ -1.68
NECAP1-213ENST00000638883 GVQW2A0A096LPI5 108 aaPredicted RBP4.56□□□□□ -1.68
NECAP1-213ENST00000638883 CDK2AP2O75956 126 aa4.56□□□□□ -1.68
NECAP1-213ENST00000638883 SPRR4Q96PI1 79 aa4.56□□□□□ -1.68
NECAP1-213ENST00000638883 Q6ZRX8 168 aa4.55□□□□□ -1.68
NECAP1-213ENST00000638883 C9orf163Q8N9P6 203 aa4.53□□□□□ -1.68
NECAP1-213ENST00000638883 DMBT1Q9UGM3 2413 aaPredicted RBP4.53□□□□□ -1.68
NECAP1-213ENST00000638883 LELP1Q5T871 98 aa4.53□□□□□ -1.68
NECAP1-213ENST00000638883 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
NECAP1-213ENST00000638883 DEFB131BA0A096LNP1 70 aa4.53□□□□□ -1.69
NECAP1-213ENST00000638883 IGLV1-50A0A075B6I6 118 aa4.52□□□□□ -1.69
NECAP1-213ENST00000638883 A8MWP4 228 aa4.52□□□□□ -1.69
NECAP1-213ENST00000638883 CSNK1G2-AS1Q8NCQ2 148 aa4.52□□□□□ -1.69
NECAP1-213ENST00000638883 HRES1P13985 223 aa4.52□□□□□ -1.69
NECAP1-213ENST00000638883 IGFL1Q6UW32 110 aa4.52□□□□□ -1.69
NECAP1-213ENST00000638883 UQCR11O14957 56 aa4.51□□□□□ -1.69
NECAP1-213ENST00000638883 TP53AIP1Q9HCN2 124 aa4.51□□□□□ -1.69
NECAP1-213ENST00000638883 KRTAP10-3P60369 221 aa4.51□□□□□ -1.69
NECAP1-213ENST00000638883 CNBPP62633 177 aaKnown RBP4.5□□□□□ -1.69
NECAP1-213ENST00000638883 ACYP2P14621 99 aa4.5□□□□□ -1.69
NECAP1-213ENST00000638883 ASB16-AS1Q495Z4 193 aa4.5□□□□□ -1.69
NECAP1-213ENST00000638883 REG3GQ6UW15 175 aa4.5□□□□□ -1.69
NECAP1-213ENST00000638883 LRP1BQ9NZR2 4599 aa4.49□□□□□ -1.69
NECAP1-213ENST00000638883 MYCBP2O75592 4640 aa4.48□□□□□ -1.69
NECAP1-213ENST00000638883 IGLV8-61A0A075B6I0 122 aa4.48□□□□□ -1.69
NECAP1-213ENST00000638883 NUPR2A6NF83 97 aa4.48□□□□□ -1.69
NECAP1-213ENST00000638883 KRTAP29-1A8MX34 341 aaPredicted RBP4.48□□□□□ -1.69
NECAP1-213ENST00000638883 TENM3Q9P273 2699 aa4.47□□□□□ -1.69
NECAP1-213ENST00000638883 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
NECAP1-213ENST00000638883 PRLHP81277 87 aa4.47□□□□□ -1.69
NECAP1-213ENST00000638883 Q6ZR54 194 aa4.47□□□□□ -1.69
NECAP1-213ENST00000638883 IGKV2-24A0A0C4DH68 120 aa4.46□□□□□ -1.7
NECAP1-213ENST00000638883 FAT1Q14517 4588 aa4.46□□□□□ -1.7
NECAP1-213ENST00000638883 PRR34Q9NV39 138 aa4.46□□□□□ -1.7
NECAP1-213ENST00000638883 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
NECAP1-213ENST00000638883 FAM168BA1KXE4 195 aa4.45□□□□□ -1.7
NECAP1-213ENST00000638883 RTL8CO15255 209 aa4.44□□□□□ -1.7
NECAP1-213ENST00000638883 PLAC8Q9NZF1 115 aa4.44□□□□□ -1.7
NECAP1-213ENST00000638883 KRTAP10-2P60368 255 aa4.42□□□□□ -1.7
NECAP1-213ENST00000638883 K7EIL1 84 aa4.41□□□□□ -1.7
NECAP1-213ENST00000638883 ROMO1P60602 79 aa4.41□□□□□ -1.7
NECAP1-213ENST00000638883 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
NECAP1-213ENST00000638883 C15orf56Q8N910 161 aa4.41□□□□□ -1.7
NECAP1-213ENST00000638883 MMP24-AS1A0A0U1RRL7 71 aa4.41□□□□□ -1.7
NECAP1-213ENST00000638883 FLG2Q5D862 2391 aaPredicted RBP4.41□□□□□ -1.7
NECAP1-213ENST00000638883 C8orf17Q9NRJ1 99 aa4.4□□□□□ -1.71
NECAP1-213ENST00000638883 IGLV9-49A0A0B4J1Y8 123 aa4.39□□□□□ -1.71
NECAP1-213ENST00000638883 SPINK6Q6UWN8 80 aa4.39□□□□□ -1.71
NECAP1-213ENST00000638883 EPPK1P58107 5090 aaKnown RBP4.38□□□□□ -1.71
NECAP1-213ENST00000638883 A0A087X002 238 aa4.38□□□□□ -1.71
NECAP1-213ENST00000638883 SPINT4Q6UDR6 99 aa4.38□□□□□ -1.71
NECAP1-213ENST00000638883 MRPL34Q9BQ48 92 aaKnown RBP4.38□□□□□ -1.71
NECAP1-213ENST00000638883 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
NECAP1-213ENST00000638883 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
NECAP1-213ENST00000638883 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
NECAP1-213ENST00000638883 SPINK1P00995 79 aa4.37□□□□□ -1.71
NECAP1-213ENST00000638883 SSBP3-AS1Q7Z2R9 100 aa4.36□□□□□ -1.71
NECAP1-213ENST00000638883 SPRR1AP35321 89 aa4.36□□□□□ -1.71
NECAP1-213ENST00000638883 K7ERS5 55 aa4.36□□□□□ -1.71
NECAP1-213ENST00000638883 KRTAP4-16G5E9R7 235 aaPredicted RBP4.35□□□□□ -1.71
NECAP1-213ENST00000638883 KRTAP21-3Q3LHN1 58 aa4.34□□□□□ -1.71
NECAP1-213ENST00000638883 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
NECAP1-213ENST00000638883 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
NECAP1-213ENST00000638883 SRRM2Q9UQ35 2752 aaKnown RBP4.33□□□□□ -1.72
NECAP1-213ENST00000638883 A0A1B0GVX0 72 aa4.33□□□□□ -1.72
NECAP1-213ENST00000638883 TENM2Q9NT68 2774 aa4.32□□□□□ -1.72
NECAP1-213ENST00000638883 KRTAP10-11P60412 298 aa4.32□□□□□ -1.72
NECAP1-213ENST00000638883 ZNF861PO60384 105 aa4.32□□□□□ -1.72
NECAP1-213ENST00000638883 DNAH10OSP0CZ25 163 aa4.31□□□□□ -1.72
NECAP1-213ENST00000638883 KRTAP19-1Q8IUB9 90 aa4.31□□□□□ -1.72
NECAP1-213ENST00000638883 TLX1NBP0CAT3 122 aa4.3□□□□□ -1.72
NECAP1-213ENST00000638883 C14orf177Q52M58 125 aa4.3□□□□□ -1.72
NECAP1-213ENST00000638883 IGLV5-52A0A0A0MRZ9 124 aa4.29□□□□□ -1.72
NECAP1-213ENST00000638883 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
NECAP1-213ENST00000638883 LINC01556Q5JQF7 62 aa4.28□□□□□ -1.72
NECAP1-213ENST00000638883 KRTAP26-1Q6PEX3 210 aa4.28□□□□□ -1.72
NECAP1-213ENST00000638883 IGKV2D-30A0A075B6S6 120 aa4.27□□□□□ -1.73
NECAP1-213ENST00000638883 IGKV2-30P06310 120 aa4.27□□□□□ -1.73
NECAP1-213ENST00000638883 DMAC1Q96GE9 116 aa4.27□□□□□ -1.73
NECAP1-213ENST00000638883 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
NECAP1-213ENST00000638883 KRTAP9-7A8MTY7 169 aa4.27□□□□□ -1.73
NECAP1-213ENST00000638883 IGLV7-43P04211 117 aa4.26□□□□□ -1.73
NECAP1-213ENST00000638883 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
NECAP1-213ENST00000638883 A8MUU9 505 aa4.26□□□□□ -1.73
NECAP1-213ENST00000638883 ABCA13Q86UQ4 5058 aa4.25□□□□□ -1.73
NECAP1-213ENST00000638883 CASC10Q5T4H9 136 aa4.25□□□□□ -1.73
NECAP1-213ENST00000638883 Q5W150 140 aa4.24□□□□□ -1.73
NECAP1-213ENST00000638883 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
NECAP1-213ENST00000638883 LPAP08519 4548 aa4.23□□□□□ -1.73
NECAP1-213ENST00000638883 LINC00483Q53H64 154 aa4.22□□□□□ -1.73
NECAP1-213ENST00000638883 KRTAP7-1Q8IUC3 87 aa4.22□□□□□ -1.73
NECAP1-213ENST00000638883 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
NECAP1-213ENST00000638883 H3BNG1 76 aa4.21□□□□□ -1.74
NECAP1-213ENST00000638883 SMR3BP02814 79 aaPredicted RBP4.21□□□□□ -1.74
NECAP1-213ENST00000638883 CHTF8P0CG12 524 aa4.21□□□□□ -1.74
NECAP1-213ENST00000638883 SPRR1BP22528 89 aa4.2□□□□□ -1.74
NECAP1-213ENST00000638883 NBDYA0A0U1RRE5 68 aa4.2□□□□□ -1.74
NECAP1-213ENST00000638883 P0C880 135 aa4.19□□□□□ -1.74
NECAP1-213ENST00000638883 CIRBP-AS1Q8TBR5 109 aa4.19□□□□□ -1.74
NECAP1-213ENST00000638883 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms