RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 A0A096LNI7 61 aa7.22□□□□□ -1.25
CAPN3-221ENST00000638141 CDK2AP2O75956 126 aa7.19□□□□□ -1.26
CAPN3-221ENST00000638141 COL7A1Q02388 2944 aa7.18□□□□□ -1.26
CAPN3-221ENST00000638141 K7EIL1 84 aa7.18□□□□□ -1.26
CAPN3-221ENST00000638141 IGHV6-1A0A0B4J1U7 121 aa7.17□□□□□ -1.26
CAPN3-221ENST00000638141 ZNF861PO60384 105 aa7.17□□□□□ -1.26
CAPN3-221ENST00000638141 TGP01266 2768 aa7.16□□□□□ -1.26
CAPN3-221ENST00000638141 DNAH9Q9NYC9 4486 aa7.15□□□□□ -1.26
CAPN3-221ENST00000638141 KRTAP13-1Q8IUC0 172 aa7.15□□□□□ -1.27
CAPN3-221ENST00000638141 DNAH1Q9P2D7 4330 aa7.14□□□□□ -1.27
CAPN3-221ENST00000638141 C14orf177Q52M58 125 aa7.14□□□□□ -1.27
CAPN3-221ENST00000638141 LINC00483Q53H64 154 aa7.13□□□□□ -1.27
CAPN3-221ENST00000638141 TENM3Q9P273 2699 aa7.13□□□□□ -1.27
CAPN3-221ENST00000638141 C1orf134Q5TEV5 83 aa7.12□□□□□ -1.27
CAPN3-221ENST00000638141 Q5W150 140 aa7.12□□□□□ -1.27
CAPN3-221ENST00000638141 HUWE1Q7Z6Z7 4374 aaKnown RBP7.12□□□□□ -1.27
CAPN3-221ENST00000638141 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
CAPN3-221ENST00000638141 ZNF706Q9Y5V0 76 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-221ENST00000638141 ROMO1P60602 79 aa7.09□□□□□ -1.28
CAPN3-221ENST00000638141 CHTF8P0CG12 524 aa7.08□□□□□ -1.28
CAPN3-221ENST00000638141 NOTCH2NLQ7Z3S9 236 aa7.07□□□□□ -1.28
CAPN3-221ENST00000638141 STAB2Q8WWQ8 2551 aa7.07□□□□□ -1.28
CAPN3-221ENST00000638141 IGLV7-43P04211 117 aa7.06□□□□□ -1.28
CAPN3-221ENST00000638141 KRTAP25-1Q3LHN0 102 aa7.06□□□□□ -1.28
CAPN3-221ENST00000638141 IGLV9-49A0A0B4J1Y8 123 aa7.04□□□□□ -1.28
CAPN3-221ENST00000638141 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
CAPN3-221ENST00000638141 IGKV2-30P06310 120 aa7.01□□□□□ -1.29
CAPN3-221ENST00000638141 WWC2-AS2Q96NR7 200 aa7.01□□□□□ -1.29
CAPN3-221ENST00000638141 A8MUU9 505 aa7□□□□□ -1.29
CAPN3-221ENST00000638141 DNAH7Q8WXX0 4024 aa6.97□□□□□ -1.29
CAPN3-221ENST00000638141 CSMD3Q7Z407 3707 aa6.97□□□□□ -1.29
CAPN3-221ENST00000638141 SRRM2Q9UQ35 2752 aaKnown RBP6.96□□□□□ -1.29
CAPN3-221ENST00000638141 IGLV5-52A0A0A0MRZ9 124 aa6.94□□□□□ -1.3
CAPN3-221ENST00000638141 LY6G6CO95867 125 aa6.93□□□□□ -1.3
CAPN3-221ENST00000638141 KRTAP1-5Q9BYS1 174 aa6.93□□□□□ -1.3
CAPN3-221ENST00000638141 LINC00304Q8N9R0 145 aa6.9□□□□□ -1.3
CAPN3-221ENST00000638141 SPACA4Q8TDM5 124 aa6.9□□□□□ -1.31
CAPN3-221ENST00000638141 STARD9Q9P2P6 4700 aa6.89□□□□□ -1.31
CAPN3-221ENST00000638141 IGKV2D-30A0A075B6S6 120 aa6.89□□□□□ -1.31
CAPN3-221ENST00000638141 LYSTQ99698 3801 aa6.88□□□□□ -1.31
CAPN3-221ENST00000638141 KMT2CQ8NEZ4 4911 aaKnown RBP6.87□□□□□ -1.31
CAPN3-221ENST00000638141 SEC61BP60468 96 aaKnown RBP6.87□□□□□ -1.31
CAPN3-221ENST00000638141 DYNC2H1Q8NCM8 4307 aaKnown RBP6.86□□□□□ -1.31
CAPN3-221ENST00000638141 PLECQ15149 4684 aaKnown RBP6.85□□□□□ -1.31
CAPN3-221ENST00000638141 H0YAA0 97 aa6.85□□□□□ -1.31
CAPN3-221ENST00000638141 P0C880 135 aa6.85□□□□□ -1.31
CAPN3-221ENST00000638141 SPINK6Q6UWN8 80 aa6.85□□□□□ -1.31
CAPN3-221ENST00000638141 PANO1I0J062 215 aa6.83□□□□□ -1.32
CAPN3-221ENST00000638141 SSBP3-AS1Q7Z2R9 100 aa6.83□□□□□ -1.32
CAPN3-221ENST00000638141 UBE2DNLQ8IWF7 75 aa6.83□□□□□ -1.32
CAPN3-221ENST00000638141 Q6ZSA8 131 aa6.82□□□□□ -1.32
CAPN3-221ENST00000638141 RYR3Q15413 4870 aa6.8□□□□□ -1.32
CAPN3-221ENST00000638141 PSORS1C2Q9UIG4 136 aa6.8□□□□□ -1.32
CAPN3-221ENST00000638141 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-221ENST00000638141 KRTAP16-1A8MUX0 517 aa6.79□□□□□ -1.32
CAPN3-221ENST00000638141 APLNQ9ULZ1 77 aa6.77□□□□□ -1.32
CAPN3-221ENST00000638141 DNAH10Q8IVF4 4471 aa6.77□□□□□ -1.33
CAPN3-221ENST00000638141 NUPR2A6NF83 97 aa6.76□□□□□ -1.33
CAPN3-221ENST00000638141 Q6ZRN7 208 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-221ENST00000638141 CIRBP-AS1Q8TBR5 109 aa6.74□□□□□ -1.33
CAPN3-221ENST00000638141 ANAPC11Q9NYG5 84 aa6.74□□□□□ -1.33
CAPN3-221ENST00000638141 NBDYA0A0U1RRE5 68 aa6.74□□□□□ -1.33
CAPN3-221ENST00000638141 VPS13DQ5THJ4 4388 aa6.73□□□□□ -1.33
CAPN3-221ENST00000638141 KMT2AQ03164 3969 aa6.73□□□□□ -1.33
CAPN3-221ENST00000638141 A0A1B0GU33 70 aa6.72□□□□□ -1.33
CAPN3-221ENST00000638141 SACSQ9NZJ4 4579 aa6.72□□□□□ -1.33
CAPN3-221ENST00000638141 K7ERS5 55 aa6.71□□□□□ -1.34
CAPN3-221ENST00000638141 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.34
CAPN3-221ENST00000638141 HYDINQ4G0P3 5121 aa6.7□□□□□ -1.34
CAPN3-221ENST00000638141 DNAH8Q96JB1 4490 aa6.68□□□□□ -1.34
CAPN3-221ENST00000638141 SPINK1P00995 79 aa6.68□□□□□ -1.34
CAPN3-221ENST00000638141 A0A087WTM6 91 aa6.65□□□□□ -1.35
CAPN3-221ENST00000638141 TYMSOSQ8TAI1 123 aa6.64□□□□□ -1.35
CAPN3-221ENST00000638141 DNAH2Q9P225 4427 aa6.63□□□□□ -1.35
CAPN3-221ENST00000638141 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
CAPN3-221ENST00000638141 DNAH6Q9C0G6 4158 aa6.61□□□□□ -1.35
CAPN3-221ENST00000638141 RYR2Q92736 4967 aa6.61□□□□□ -1.35
CAPN3-221ENST00000638141 Q8N1X5 172 aa6.6□□□□□ -1.35
CAPN3-221ENST00000638141 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
CAPN3-221ENST00000638141 FRAS1Q86XX4 4008 aa6.58□□□□□ -1.36
CAPN3-221ENST00000638141 SPINT4Q6UDR6 99 aa6.58□□□□□ -1.36
CAPN3-221ENST00000638141 EPPK1P58107 5090 aaKnown RBP6.57□□□□□ -1.36
CAPN3-221ENST00000638141 CRIPTQ9P021 101 aa6.57□□□□□ -1.36
CAPN3-221ENST00000638141 NDUFAF8A1L188 74 aa6.53□□□□□ -1.36
CAPN3-221ENST00000638141 KRTAP13-2Q52LG2 175 aa6.53□□□□□ -1.36
CAPN3-221ENST00000638141 FLG2Q5D862 2391 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-221ENST00000638141 FAT2Q9NYQ8 4349 aa6.52□□□□□ -1.37
CAPN3-221ENST00000638141 DNAH17Q9UFH2 4485 aa6.51□□□□□ -1.37
CAPN3-221ENST00000638141 TPRXLQ17RH7 258 aa6.51□□□□□ -1.37
CAPN3-221ENST00000638141 COX6B2Q6YFQ2 88 aa6.51□□□□□ -1.37
CAPN3-221ENST00000638141 RPL37P61927 97 aaKnown RBP6.47□□□□□ -1.37
CAPN3-221ENST00000638141 PKD1P98161 4303 aa6.46□□□□□ -1.37
CAPN3-221ENST00000638141 BIRC6Q9NR09 4857 aa6.46□□□□□ -1.38
CAPN3-221ENST00000638141 KRTAP3-1Q9BYR8 98 aa6.45□□□□□ -1.38
CAPN3-221ENST00000638141 DNAH11Q96DT5 4516 aa6.45□□□□□ -1.38
CAPN3-221ENST00000638141 PKHD1P08F94 4074 aa6.44□□□□□ -1.38
CAPN3-221ENST00000638141 RPS29P62273 56 aaKnown RBP6.44□□□□□ -1.38
CAPN3-221ENST00000638141 HECTD4Q9Y4D8 3996 aa6.43□□□□□ -1.38
CAPN3-221ENST00000638141 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
CAPN3-221ENST00000638141 DNAH5Q8TE73 4624 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms