RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	NPC2	P61916	151 aa		4.07	□□□□□ -1.76
CACNA1A-222	ENST00000636022	TIMM17B	O60830	172 aa		4.06	□□□□□ -1.76
CACNA1A-222	ENST00000636022	LCE4A	Q5TA78	99 aa		4.06	□□□□□ -1.76
CACNA1A-222	ENST00000636022	LINC00308	Q8TCZ7	52 aa		4.06	□□□□□ -1.76
CACNA1A-222	ENST00000636022	SPRR1B	P22528	89 aa		4.05	□□□□□ -1.76
CACNA1A-222	ENST00000636022	SEC61B	P60468	96 aa	Known RBP	4.05	□□□□□ -1.76
CACNA1A-222	ENST00000636022	PRR15	Q8IV56	129 aa		4.05	□□□□□ -1.76
CACNA1A-222	ENST00000636022	LAMTOR3	Q9UHA4	124 aa		4.04	□□□□□ -1.76
CACNA1A-222	ENST00000636022	FLG	P20930	4061 aa	Predicted RBP	4.04	□□□□□ -1.76
CACNA1A-222	ENST00000636022	COPS9	Q8WXC6	57 aa		4.03	□□□□□ -1.76
CACNA1A-222	ENST00000636022	DHRS4-AS1	Q9P1J3	65 aa		4.03	□□□□□ -1.76
CACNA1A-222	ENST00000636022	TRBV7-6	A0A0J9YX20	115 aa		4.02	□□□□□ -1.77
CACNA1A-222	ENST00000636022	ZNF815P	A8K554	130 aa		4.02	□□□□□ -1.77
CACNA1A-222	ENST00000636022	ELOF1	P60002	83 aa	Known RBP	4.02	□□□□□ -1.77
CACNA1A-222	ENST00000636022		Q6JHZ5	121 aa		4.02	□□□□□ -1.77
CACNA1A-222	ENST00000636022		H7BZZ5	65 aa		4.01	□□□□□ -1.77
CACNA1A-222	ENST00000636022	COX7B	P24311	80 aa		4.01	□□□□□ -1.77
CACNA1A-222	ENST00000636022	C6orf99	Q4VX62	202 aa		4.01	□□□□□ -1.77
CACNA1A-222	ENST00000636022	LST1	O00453	97 aa		4	□□□□□ -1.77
CACNA1A-222	ENST00000636022	LINC01547	P58512	204 aa	Predicted RBP	4	□□□□□ -1.77
CACNA1A-222	ENST00000636022	KRTAP4-11	Q9BYQ6	195 aa		4	□□□□□ -1.77
CACNA1A-222	ENST00000636022	KRTAP19-2	Q3LHN2	52 aa		3.99	□□□□□ -1.77
CACNA1A-222	ENST00000636022	SMIM29	Q86T20	159 aa		3.99	□□□□□ -1.77
CACNA1A-222	ENST00000636022	BRK1	Q8WUW1	75 aa		3.99	□□□□□ -1.77
CACNA1A-222	ENST00000636022	LIMD2	Q9BT23	127 aa		3.99	□□□□□ -1.77
CACNA1A-222	ENST00000636022	KRTAP9-7	A8MTY7	169 aa		3.98	□□□□□ -1.77
CACNA1A-222	ENST00000636022	TRIAP1	O43715	76 aa		3.98	□□□□□ -1.77
CACNA1A-222	ENST00000636022	CCK	P06307	115 aa		3.98	□□□□□ -1.77
CACNA1A-222	ENST00000636022	ATP5E	P56381	51 aa	Predicted RBP	3.98	□□□□□ -1.77
CACNA1A-222	ENST00000636022		Q1RN00	199 aa		3.98	□□□□□ -1.77
CACNA1A-222	ENST00000636022	LCE5A	Q5TCM9	118 aa		3.98	□□□□□ -1.77
CACNA1A-222	ENST00000636022	DEFB105A	Q8NG35	78 aa		3.98	□□□□□ -1.77
CACNA1A-222	ENST00000636022	IGLV5-48	A0A075B6I7	105 aa		3.97	□□□□□ -1.77
CACNA1A-222	ENST00000636022	KLKP1	Q107X0	134 aa		3.97	□□□□□ -1.77
CACNA1A-222	ENST00000636022	SCGB1D4	Q6XE38	83 aa		3.97	□□□□□ -1.77
CACNA1A-222	ENST00000636022	C9orf92	A6NGG3	77 aa		3.96	□□□□□ -1.78
CACNA1A-222	ENST00000636022	PCOTH	Q58A44	107 aa		3.96	□□□□□ -1.78
CACNA1A-222	ENST00000636022	MUSTN1	Q8IVN3	82 aa		3.96	□□□□□ -1.78
CACNA1A-222	ENST00000636022		A0A0G2JQZ4	141 aa		3.95	□□□□□ -1.78
CACNA1A-222	ENST00000636022		H7C2G1	150 aa		3.95	□□□□□ -1.78
CACNA1A-222	ENST00000636022	IGLV8-61	A0A075B6I0	122 aa		3.94	□□□□□ -1.78
CACNA1A-222	ENST00000636022	COX6C	P09669	75 aa		3.94	□□□□□ -1.78
CACNA1A-222	ENST00000636022	OBSCN-AS1	Q96MR7	158 aa		3.94	□□□□□ -1.78
CACNA1A-222	ENST00000636022	RBM12B-AS1	Q9P1G2	102 aa		3.94	□□□□□ -1.78
CACNA1A-222	ENST00000636022	TRAV7	A0A075B6U4	112 aa		3.93	□□□□□ -1.78
CACNA1A-222	ENST00000636022	TRAV13-2	A0A0B4J235	113 aa		3.93	□□□□□ -1.78
CACNA1A-222	ENST00000636022	NDUFC1	O43677	76 aa		3.93	□□□□□ -1.78
CACNA1A-222	ENST00000636022	MT1H	P80294	61 aa		3.93	□□□□□ -1.78
CACNA1A-222	ENST00000636022	SMIM11B	Q8TCY0	68 aa		3.93	□□□□□ -1.78
CACNA1A-222	ENST00000636022	ATP5EP2	Q5VTU8	51 aa		3.91	□□□□□ -1.78
CACNA1A-222	ENST00000636022	CLEC2B	Q92478	149 aa		3.91	□□□□□ -1.78
CACNA1A-222	ENST00000636022	RPL37	P61927	97 aa	Known RBP	3.9	□□□□□ -1.79
CACNA1A-222	ENST00000636022		Q1T7F1	81 aa		3.9	□□□□□ -1.79
CACNA1A-222	ENST00000636022	LINC00575	Q6W349	94 aa		3.9	□□□□□ -1.79
CACNA1A-222	ENST00000636022	KTN1-AS1	Q86SY8	53 aa		3.9	□□□□□ -1.79
CACNA1A-222	ENST00000636022	C20orf197	Q8N268	126 aa		3.9	□□□□□ -1.79
CACNA1A-222	ENST00000636022		A0A087WVE0	104 aa		3.89	□□□□□ -1.79
CACNA1A-222	ENST00000636022	IGKV3D-7	A0A0C4DH55	119 aa		3.89	□□□□□ -1.79
CACNA1A-222	ENST00000636022	KRTAP9-3	Q9BYQ3	159 aa		3.89	□□□□□ -1.79
CACNA1A-222	ENST00000636022	C8orf87	E5RJ46	101 aa		3.88	□□□□□ -1.79
CACNA1A-222	ENST00000636022	BAALC-AS2	P0C853	105 aa		3.88	□□□□□ -1.79
CACNA1A-222	ENST00000636022		Q6ZQY7	126 aa		3.88	□□□□□ -1.79
CACNA1A-222	ENST00000636022	LINC00846	Q9NV44	126 aa		3.88	□□□□□ -1.79
CACNA1A-222	ENST00000636022	CRCT1	Q9UGL9	99 aa		3.88	□□□□□ -1.79
CACNA1A-222	ENST00000636022	USH2A	O75445	5202 aa		3.88	□□□□□ -1.79
CACNA1A-222	ENST00000636022		F8WEM9	126 aa		3.87	□□□□□ -1.79
CACNA1A-222	ENST00000636022	NDUFS5	O43920	106 aa		3.87	□□□□□ -1.79
CACNA1A-222	ENST00000636022	KRTAP10-6	P60371	365 aa	Predicted RBP	3.87	□□□□□ -1.79
CACNA1A-222	ENST00000636022	RBM3	P98179	157 aa	Known RBP	3.87	□□□□□ -1.79
CACNA1A-222	ENST00000636022	IGFL1	Q6UW32	110 aa		3.86	□□□□□ -1.79
CACNA1A-222	ENST00000636022	SSPO	A2VEC9	5147 aa		3.85	□□□□□ -1.79
CACNA1A-222	ENST00000636022	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.85	□□□□□ -1.79
CACNA1A-222	ENST00000636022	TRBV7-4	A0A0J9YYF1	115 aa		3.83	□□□□□ -1.8
CACNA1A-222	ENST00000636022		Q6ZVQ6	151 aa		3.83	□□□□□ -1.8
CACNA1A-222	ENST00000636022	hDV103S1	A0JD37	113 aa		3.82	□□□□□ -1.8
CACNA1A-222	ENST00000636022		M0R2T5	61 aa		3.82	□□□□□ -1.8
CACNA1A-222	ENST00000636022	COX6B2	Q6YFQ2	88 aa		3.82	□□□□□ -1.8
CACNA1A-222	ENST00000636022		Q75L30	129 aa		3.82	□□□□□ -1.8
CACNA1A-222	ENST00000636022		A6NN06	94 aa		3.81	□□□□□ -1.8
CACNA1A-222	ENST00000636022	DNAL4	O96015	105 aa		3.81	□□□□□ -1.8
CACNA1A-222	ENST00000636022	LCA10	Q71F78	164 aa		3.81	□□□□□ -1.8
CACNA1A-222	ENST00000636022	MPLKIP	Q8TAP9	179 aa		3.81	□□□□□ -1.8
CACNA1A-222	ENST00000636022	FAM218A	Q96MZ4	157 aa		3.81	□□□□□ -1.8
CACNA1A-222	ENST00000636022	ATP11AUN	Q6ZP68	121 aa		3.8	□□□□□ -1.8
CACNA1A-222	ENST00000636022	SNURF	Q9Y675	71 aa		3.79	□□□□□ -1.8
CACNA1A-222	ENST00000636022		H0YGX0	51 aa		3.78	□□□□□ -1.8
CACNA1A-222	ENST00000636022	TMEM256-PLSCR3	K7ERE1	68 aa		3.78	□□□□□ -1.8
CACNA1A-222	ENST00000636022		Q96NJ1	140 aa		3.78	□□□□□ -1.8
CACNA1A-222	ENST00000636022	C20orf166-AS1	Q96NR2	134 aa		3.78	□□□□□ -1.8
CACNA1A-222	ENST00000636022		A8MUU9	505 aa		3.77	□□□□□ -1.81
CACNA1A-222	ENST00000636022	C14orf132	Q9NPU4	83 aa		3.77	□□□□□ -1.81
CACNA1A-222	ENST00000636022	TRAV22	A0A0B4J277	110 aa		3.76	□□□□□ -1.81
CACNA1A-222	ENST00000636022		A8MUN3	132 aa		3.76	□□□□□ -1.81
CACNA1A-222	ENST00000636022	C7orf65	Q6ZTY9	151 aa		3.76	□□□□□ -1.81
CACNA1A-222	ENST00000636022		A0A087WSZ3	146 aa		3.75	□□□□□ -1.81
CACNA1A-222	ENST00000636022		Q5VV11	94 aa		3.75	□□□□□ -1.81
CACNA1A-222	ENST00000636022	TMEM254	Q8TBM7	123 aa		3.75	□□□□□ -1.81
CACNA1A-222	ENST00000636022	CYP4F30P	Q9H0H9	118 aa		3.75	□□□□□ -1.81
CACNA1A-222	ENST00000636022	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.74	□□□□□ -1.81
CACNA1A-222	ENST00000636022		A0A1W2PNM2	257 aa		3.74	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms