RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 IGKV4-1P06312 121 aa4.35□□□□□ -1.71
BRCA1-230ENST00000634433 A0A087WSZ3 146 aa4.34□□□□□ -1.72
BRCA1-230ENST00000634433 A8MU10 97 aa4.34□□□□□ -1.72
BRCA1-230ENST00000634433 PRR4Q16378 134 aa4.33□□□□□ -1.72
BRCA1-230ENST00000634433 FAM229BQ4G0N7 80 aa4.33□□□□□ -1.72
BRCA1-230ENST00000634433 FRAS1Q86XX4 4008 aa4.33□□□□□ -1.72
BRCA1-230ENST00000634433 IGLV7-43P04211 117 aa4.33□□□□□ -1.72
BRCA1-230ENST00000634433 KRTAP10-2P60368 255 aa4.33□□□□□ -1.72
BRCA1-230ENST00000634433 RETNLBQ9BQ08 111 aa4.33□□□□□ -1.72
BRCA1-230ENST00000634433 A8MWP4 228 aa4.32□□□□□ -1.72
BRCA1-230ENST00000634433 Q8N9L7 120 aa4.32□□□□□ -1.72
BRCA1-230ENST00000634433 DNAH8Q96JB1 4490 aa4.32□□□□□ -1.72
BRCA1-230ENST00000634433 A0A0G2JQZ4 141 aa4.32□□□□□ -1.72
BRCA1-230ENST00000634433 HYDINQ4G0P3 5121 aa4.32□□□□□ -1.72
BRCA1-230ENST00000634433 DNAH11Q96DT5 4516 aa4.31□□□□□ -1.72
BRCA1-230ENST00000634433 A0A087X002 238 aa4.31□□□□□ -1.72
BRCA1-230ENST00000634433 DSCR10P59022 87 aa4.31□□□□□ -1.72
BRCA1-230ENST00000634433 CIRBP-AS1Q8TBR5 109 aa4.31□□□□□ -1.72
BRCA1-230ENST00000634433 Q6ZSA8 131 aa4.31□□□□□ -1.72
BRCA1-230ENST00000634433 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
BRCA1-230ENST00000634433 SPTSSBQ8NFR3 76 aa4.3□□□□□ -1.72
BRCA1-230ENST00000634433 SRRM2Q9UQ35 2752 aaKnown RBP4.29□□□□□ -1.72
BRCA1-230ENST00000634433 K7EQZ3 153 aa4.29□□□□□ -1.72
BRCA1-230ENST00000634433 KRTAP10-1P60331 282 aa4.29□□□□□ -1.72
BRCA1-230ENST00000634433 C1orf64Q8NEQ6 169 aa4.29□□□□□ -1.72
BRCA1-230ENST00000634433 HCG22E2RYF7 251 aa4.28□□□□□ -1.72
BRCA1-230ENST00000634433 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
BRCA1-230ENST00000634433 LINC00472Q9H8W2 130 aa4.28□□□□□ -1.72
BRCA1-230ENST00000634433 PCLOQ9Y6V0 5065 aa4.28□□□□□ -1.72
BRCA1-230ENST00000634433 MOBPQ13875 183 aa4.28□□□□□ -1.72
BRCA1-230ENST00000634433 DYNC1H1Q14204 4646 aaKnown RBP4.28□□□□□ -1.72
BRCA1-230ENST00000634433 A0A1B0GVY2 172 aa4.27□□□□□ -1.73
BRCA1-230ENST00000634433 NDUFB1O75438 58 aa4.27□□□□□ -1.73
BRCA1-230ENST00000634433 SSBP3-AS1Q7Z2R9 100 aa4.27□□□□□ -1.73
BRCA1-230ENST00000634433 FAT2Q9NYQ8 4349 aa4.27□□□□□ -1.73
BRCA1-230ENST00000634433 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
BRCA1-230ENST00000634433 DEFB116Q30KQ4 102 aa4.27□□□□□ -1.73
BRCA1-230ENST00000634433 NDUFC1O43677 76 aa4.26□□□□□ -1.73
BRCA1-230ENST00000634433 PKD1P98161 4303 aa4.26□□□□□ -1.73
BRCA1-230ENST00000634433 ANAPC11Q9NYG5 84 aa4.25□□□□□ -1.73
BRCA1-230ENST00000634433 ATP11AUNQ6ZP68 121 aa4.25□□□□□ -1.73
BRCA1-230ENST00000634433 TMEM254Q8TBM7 123 aa4.24□□□□□ -1.73
BRCA1-230ENST00000634433 RYR1P21817 5038 aa4.23□□□□□ -1.73
BRCA1-230ENST00000634433 CASC2Q6XLA1 102 aa4.23□□□□□ -1.73
BRCA1-230ENST00000634433 WFDC13Q8IUB5 93 aa4.22□□□□□ -1.73
BRCA1-230ENST00000634433 SNURFQ9Y675 71 aa4.22□□□□□ -1.73
BRCA1-230ENST00000634433 Q96NJ1 140 aa4.22□□□□□ -1.73
BRCA1-230ENST00000634433 KRTAP29-1A8MX34 341 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-230ENST00000634433 H7BZZ5 65 aa4.21□□□□□ -1.74
BRCA1-230ENST00000634433 A0A1B0GVX0 72 aa4.2□□□□□ -1.74
BRCA1-230ENST00000634433 ATP5EP56381 51 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-230ENST00000634433 ASB16-AS1Q495Z4 193 aa4.2□□□□□ -1.74
BRCA1-230ENST00000634433 hDV103S1A0JD37 113 aa4.2□□□□□ -1.74
BRCA1-230ENST00000634433 ROMO1P60602 79 aa4.2□□□□□ -1.74
BRCA1-230ENST00000634433 LRP1BQ9NZR2 4599 aa4.19□□□□□ -1.74
BRCA1-230ENST00000634433 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
BRCA1-230ENST00000634433 H3BPC8 53 aa4.19□□□□□ -1.74
BRCA1-230ENST00000634433 Q8N1X5 172 aa4.19□□□□□ -1.74
BRCA1-230ENST00000634433 SPINK6Q6UWN8 80 aa4.18□□□□□ -1.74
BRCA1-230ENST00000634433 KIAA1109Q2LD37 5005 aa4.18□□□□□ -1.74
BRCA1-230ENST00000634433 TP53AIP1Q9HCN2 124 aa4.18□□□□□ -1.74
BRCA1-230ENST00000634433 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
BRCA1-230ENST00000634433 KRTAP13-2Q52LG2 175 aa4.17□□□□□ -1.74
BRCA1-230ENST00000634433 LIMD2Q9BT23 127 aa4.17□□□□□ -1.74
BRCA1-230ENST00000634433 A8MUU9 505 aa4.16□□□□□ -1.74
BRCA1-230ENST00000634433 KRTAP1-4P0C5Y4 121 aa4.16□□□□□ -1.74
BRCA1-230ENST00000634433 P0C880 135 aa4.16□□□□□ -1.74
BRCA1-230ENST00000634433 LORP23490 312 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-230ENST00000634433 ZCCHC13Q8WW36 166 aaKnown RBP4.15□□□□□ -1.74
BRCA1-230ENST00000634433 KRTAP4-5Q9BYR2 181 aa4.15□□□□□ -1.74
BRCA1-230ENST00000634433 H0Y9P7 68 aa4.15□□□□□ -1.75
BRCA1-230ENST00000634433 K7ERS5 55 aa4.15□□□□□ -1.75
BRCA1-230ENST00000634433 Q1T7F1 81 aa4.15□□□□□ -1.75
BRCA1-230ENST00000634433 TYMSOSQ8TAI1 123 aa4.15□□□□□ -1.75
BRCA1-230ENST00000634433 MRPL34Q9BQ48 92 aaKnown RBP4.14□□□□□ -1.75
BRCA1-230ENST00000634433 LINC00208Q96KT6 92 aa4.13□□□□□ -1.75
BRCA1-230ENST00000634433 ABCA13Q86UQ4 5058 aa4.13□□□□□ -1.75
BRCA1-230ENST00000634433 PKHD1P08F94 4074 aa4.13□□□□□ -1.75
BRCA1-230ENST00000634433 TRAV22A0A0B4J277 110 aa4.13□□□□□ -1.75
BRCA1-230ENST00000634433 SPINK1P00995 79 aa4.13□□□□□ -1.75
BRCA1-230ENST00000634433 SPAG11AQ6PDA7 123 aa4.12□□□□□ -1.75
BRCA1-230ENST00000634433 HSPG2P98160 4391 aa4.11□□□□□ -1.75
BRCA1-230ENST00000634433 SMR3BP02814 79 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-230ENST00000634433 RPS29P62273 56 aaKnown RBP4.11□□□□□ -1.75
BRCA1-230ENST00000634433 LINC00304Q8N9R0 145 aa4.09□□□□□ -1.75
BRCA1-230ENST00000634433 SPANXA2-OT1Q8N9U9 137 aa4.08□□□□□ -1.76
BRCA1-230ENST00000634433 APOBP04114 4563 aaKnown RBP4.08□□□□□ -1.76
BRCA1-230ENST00000634433 CYP4F30PQ9H0H9 118 aa4.07□□□□□ -1.76
BRCA1-230ENST00000634433 Q8N9P0 234 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-230ENST00000634433 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
BRCA1-230ENST00000634433 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
BRCA1-230ENST00000634433 MIR22HGQ0VDD5 57 aa4.06□□□□□ -1.76
BRCA1-230ENST00000634433 LOC101927531A0A1B0GV80 90 aa4.05□□□□□ -1.76
BRCA1-230ENST00000634433 KRTAP10-4P60372 401 aaPredicted RBP4.05□□□□□ -1.76
BRCA1-230ENST00000634433 Q5VV11 94 aa4.05□□□□□ -1.76
BRCA1-230ENST00000634433 KRTAP3-1Q9BYR8 98 aa4.05□□□□□ -1.76
BRCA1-230ENST00000634433 C20orf166-AS1Q96NR2 134 aa4.05□□□□□ -1.76
BRCA1-230ENST00000634433 CHKB-CPT1BH3BT56 60 aa4.04□□□□□ -1.76
BRCA1-230ENST00000634433 IGLV7-46A0A075B6I9 117 aa4.03□□□□□ -1.76
BRCA1-230ENST00000634433 FAT1Q14517 4588 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms