RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 Q75L30 129 aa7.55□□□□□ -1.2
SNRPA1-216ENST00000626000 LINC00472Q9H8W2 130 aa7.55□□□□□ -1.2
SNRPA1-216ENST00000626000 KRTAP9-6A0A140TA67 174 aa7.53□□□□□ -1.2
SNRPA1-216ENST00000626000 SPCS1Q9Y6A9 102 aa7.53□□□□□ -1.2
SNRPA1-216ENST00000626000 ATP11AUNQ6ZP68 121 aa7.52□□□□□ -1.21
SNRPA1-216ENST00000626000 C14orf132Q9NPU4 83 aa7.51□□□□□ -1.21
SNRPA1-216ENST00000626000 LINC00313P59037 77 aa7.5□□□□□ -1.21
SNRPA1-216ENST00000626000 C8orf87E5RJ46 101 aa7.49□□□□□ -1.21
SNRPA1-216ENST00000626000 C20orf166-AS1Q96NR2 134 aa7.49□□□□□ -1.21
SNRPA1-216ENST00000626000 NDUFB1O75438 58 aa7.48□□□□□ -1.21
SNRPA1-216ENST00000626000 A8MUU9 505 aa7.46□□□□□ -1.22
SNRPA1-216ENST00000626000 A0A1B0GVX0 72 aa7.45□□□□□ -1.22
SNRPA1-216ENST00000626000 GTF2H5Q6ZYL4 71 aa7.45□□□□□ -1.22
SNRPA1-216ENST00000626000 IGHV6-1A0A0B4J1U7 121 aa7.44□□□□□ -1.22
SNRPA1-216ENST00000626000 K7EP34 96 aa7.44□□□□□ -1.22
SNRPA1-216ENST00000626000 DSCR10P59022 87 aa7.44□□□□□ -1.22
SNRPA1-216ENST00000626000 DEFB116Q30KQ4 102 aa7.44□□□□□ -1.22
SNRPA1-216ENST00000626000 KRTAP4-1Q9BYQ7 146 aa7.44□□□□□ -1.22
SNRPA1-216ENST00000626000 PCP4L1A6NKN8 68 aa7.43□□□□□ -1.22
SNRPA1-216ENST00000626000 NREPQ16612 68 aa7.43□□□□□ -1.22
SNRPA1-216ENST00000626000 MTURNQ8N3F0 131 aa7.42□□□□□ -1.22
SNRPA1-216ENST00000626000 A8MWP4 228 aa7.41□□□□□ -1.22
SNRPA1-216ENST00000626000 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
SNRPA1-216ENST00000626000 KRTAP4-12Q9BQ66 201 aa7.38□□□□□ -1.23
SNRPA1-216ENST00000626000 FAT4Q6V0I7 4981 aa7.37□□□□□ -1.23
SNRPA1-216ENST00000626000 F8W1H4 67 aa7.36□□□□□ -1.23
SNRPA1-216ENST00000626000 PRO0461Q9UI25 63 aa7.35□□□□□ -1.23
SNRPA1-216ENST00000626000 NOTCH2NLQ7Z3S9 236 aa7.33□□□□□ -1.24
SNRPA1-216ENST00000626000 PRR15Q8IV56 129 aa7.33□□□□□ -1.24
SNRPA1-216ENST00000626000 IGKV3D-7A0A0C4DH55 119 aa7.32□□□□□ -1.24
SNRPA1-216ENST00000626000 BPY2O14599 106 aa7.32□□□□□ -1.24
SNRPA1-216ENST00000626000 COX6B2Q6YFQ2 88 aa7.32□□□□□ -1.24
SNRPA1-216ENST00000626000 C8orf17Q9NRJ1 99 aa7.32□□□□□ -1.24
SNRPA1-216ENST00000626000 LCE3BQ5TA77 95 aa7.31□□□□□ -1.24
SNRPA1-216ENST00000626000 Q8N9P0 234 aaPredicted RBP7.3□□□□□ -1.24
SNRPA1-216ENST00000626000 UBL5Q9BZL1 73 aa7.3□□□□□ -1.24
SNRPA1-216ENST00000626000 Q6ZVQ6 151 aa7.29□□□□□ -1.24
SNRPA1-216ENST00000626000 KRTAP19-1Q8IUB9 90 aa7.28□□□□□ -1.24
SNRPA1-216ENST00000626000 KRTAP19-2Q3LHN2 52 aa7.26□□□□□ -1.25
SNRPA1-216ENST00000626000 TMEM254Q8TBM7 123 aa7.26□□□□□ -1.25
SNRPA1-216ENST00000626000 ZCCHC13Q8WW36 166 aaKnown RBP7.26□□□□□ -1.25
SNRPA1-216ENST00000626000 MRPL34Q9BQ48 92 aaKnown RBP7.24□□□□□ -1.25
SNRPA1-216ENST00000626000 hDV103S1A0JD37 113 aa7.23□□□□□ -1.25
SNRPA1-216ENST00000626000 K7EQZ3 153 aa7.23□□□□□ -1.25
SNRPA1-216ENST00000626000 ETDBQ3ZM63 59 aa7.23□□□□□ -1.25
SNRPA1-216ENST00000626000 MMP24-AS1A0A0U1RRL7 71 aa7.22□□□□□ -1.25
SNRPA1-216ENST00000626000 LINC00846Q9NV44 126 aa7.22□□□□□ -1.25
SNRPA1-216ENST00000626000 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.26
SNRPA1-216ENST00000626000 MT1HP80294 61 aa7.2□□□□□ -1.26
SNRPA1-216ENST00000626000 KRTAP9-9Q9BYP9 154 aa7.19□□□□□ -1.26
SNRPA1-216ENST00000626000 KRTAP9-4Q9BYQ2 154 aa7.19□□□□□ -1.26
SNRPA1-216ENST00000626000 ACYP1P07311 99 aa7.18□□□□□ -1.26
SNRPA1-216ENST00000626000 M0R2T5 61 aa7.16□□□□□ -1.26
SNRPA1-216ENST00000626000 NDUFS5O43920 106 aa7.16□□□□□ -1.26
SNRPA1-216ENST00000626000 CXCL6P80162 114 aa7.16□□□□□ -1.26
SNRPA1-216ENST00000626000 CASC2Q6XLA1 102 aa7.16□□□□□ -1.26
SNRPA1-216ENST00000626000 FAM236DA0A1B0GTK5 79 aa7.15□□□□□ -1.26
SNRPA1-216ENST00000626000 FAM236CP0DP71 79 aa7.15□□□□□ -1.26
SNRPA1-216ENST00000626000 FAM240AA0A1B0GVK7 77 aa7.14□□□□□ -1.27
SNRPA1-216ENST00000626000 SPINK7P58062 85 aa7.14□□□□□ -1.27
SNRPA1-216ENST00000626000 HCG22E2RYF7 251 aa7.12□□□□□ -1.27
SNRPA1-216ENST00000626000 Q8N9L7 120 aa7.12□□□□□ -1.27
SNRPA1-216ENST00000626000 HRES1P13985 223 aa7.11□□□□□ -1.27
SNRPA1-216ENST00000626000 WFDC13Q8IUB5 93 aa7.11□□□□□ -1.27
SNRPA1-216ENST00000626000 MPLKIPQ8TAP9 179 aa7.11□□□□□ -1.27
SNRPA1-216ENST00000626000 ATP5EP2Q5VTU8 51 aa7.09□□□□□ -1.27
SNRPA1-216ENST00000626000 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
SNRPA1-216ENST00000626000 TP53AIP1Q9HCN2 124 aa7.05□□□□□ -1.28
SNRPA1-216ENST00000626000 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
SNRPA1-216ENST00000626000 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
SNRPA1-216ENST00000626000 FLGP20930 4061 aaPredicted RBP7.03□□□□□ -1.28
SNRPA1-216ENST00000626000 A0A1B0GV90 55 aa7.02□□□□□ -1.29
SNRPA1-216ENST00000626000 J3QR89 54 aa7□□□□□ -1.29
SNRPA1-216ENST00000626000 IGKV2D-30A0A075B6S6 120 aa6.98□□□□□ -1.29
SNRPA1-216ENST00000626000 IGKV2-30P06310 120 aa6.98□□□□□ -1.29
SNRPA1-216ENST00000626000 Q5W150 140 aa6.98□□□□□ -1.29
SNRPA1-216ENST00000626000 LINC00643Q86TS7 51 aa6.98□□□□□ -1.29
SNRPA1-216ENST00000626000 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
SNRPA1-216ENST00000626000 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
SNRPA1-216ENST00000626000 HIST1H4AP62805 103 aaKnown RBP6.93□□□□□ -1.3
SNRPA1-216ENST00000626000 H1FX-AS1Q4G0G2 97 aa6.89□□□□□ -1.31
SNRPA1-216ENST00000626000 TRAV22A0A0B4J277 110 aa6.87□□□□□ -1.31
SNRPA1-216ENST00000626000 ATOX1O00244 68 aa6.85□□□□□ -1.31
SNRPA1-216ENST00000626000 UQCRQO14949 82 aa6.85□□□□□ -1.31
SNRPA1-216ENST00000626000 LOC101927531A0A1B0GV80 90 aa6.84□□□□□ -1.31
SNRPA1-216ENST00000626000 LCE1DQ5T752 114 aa6.83□□□□□ -1.32
SNRPA1-216ENST00000626000 C4orf26Q17RF5 130 aa6.82□□□□□ -1.32
SNRPA1-216ENST00000626000 KRTAP9-8Q9BYQ0 159 aa6.82□□□□□ -1.32
SNRPA1-216ENST00000626000 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
SNRPA1-216ENST00000626000 CYP4F30PQ9H0H9 118 aa6.78□□□□□ -1.32
SNRPA1-216ENST00000626000 A0A087WVE0 104 aa6.77□□□□□ -1.33
SNRPA1-216ENST00000626000 K7ERU9 68 aa6.77□□□□□ -1.33
SNRPA1-216ENST00000626000 C1orf64Q8NEQ6 169 aa6.76□□□□□ -1.33
SNRPA1-216ENST00000626000 H0Y9P7 68 aa6.75□□□□□ -1.33
SNRPA1-216ENST00000626000 MT2AP02795 61 aa6.75□□□□□ -1.33
SNRPA1-216ENST00000626000 LCE4AQ5TA78 99 aa6.74□□□□□ -1.33
SNRPA1-216ENST00000626000 MP68P56378 58 aa6.73□□□□□ -1.33
SNRPA1-216ENST00000626000 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
SNRPA1-216ENST00000626000 IMUPQ9GZP8 106 aa6.73□□□□□ -1.33
SNRPA1-216ENST00000626000 C5orf47Q569G3 176 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms