RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 KRTAP1-5Q9BYS1 174 aa4.54□□□□□ -1.68
TRIM49B-202ENST00000622138 C8orf17Q9NRJ1 99 aa4.54□□□□□ -1.68
TRIM49B-202ENST00000622138 SPRR1BP22528 89 aa4.54□□□□□ -1.68
TRIM49B-202ENST00000622138 SRRM2Q9UQ35 2752 aaKnown RBP4.53□□□□□ -1.68
TRIM49B-202ENST00000622138 PRLHP81277 87 aa4.53□□□□□ -1.68
TRIM49B-202ENST00000622138 STAB2Q8WWQ8 2551 aa4.53□□□□□ -1.68
TRIM49B-202ENST00000622138 A0A096LNI7 61 aa4.53□□□□□ -1.68
TRIM49B-202ENST00000622138 DMAC1Q96GE9 116 aa4.53□□□□□ -1.68
TRIM49B-202ENST00000622138 KRTAP25-1Q3LHN0 102 aa4.52□□□□□ -1.69
TRIM49B-202ENST00000622138 KRTAP11-1Q8IUC1 163 aa4.52□□□□□ -1.69
TRIM49B-202ENST00000622138 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
TRIM49B-202ENST00000622138 COL7A1Q02388 2944 aa4.51□□□□□ -1.69
TRIM49B-202ENST00000622138 K7EIL1 84 aa4.51□□□□□ -1.69
TRIM49B-202ENST00000622138 MRPL34Q9BQ48 92 aaKnown RBP4.51□□□□□ -1.69
TRIM49B-202ENST00000622138 LCE2BO14633 110 aa4.5□□□□□ -1.69
TRIM49B-202ENST00000622138 MGAM2Q2M2H8 2515 aa4.49□□□□□ -1.69
TRIM49B-202ENST00000622138 CHTF8P0CG12 524 aa4.49□□□□□ -1.69
TRIM49B-202ENST00000622138 Q96NJ1 140 aa4.49□□□□□ -1.69
TRIM49B-202ENST00000622138 DYNC2H1Q8NCM8 4307 aaKnown RBP4.49□□□□□ -1.69
TRIM49B-202ENST00000622138 A0A1B0GVX0 72 aa4.48□□□□□ -1.69
TRIM49B-202ENST00000622138 PLECQ15149 4684 aaKnown RBP4.48□□□□□ -1.69
TRIM49B-202ENST00000622138 TENM2Q9NT68 2774 aa4.48□□□□□ -1.69
TRIM49B-202ENST00000622138 DNAH7Q8WXX0 4024 aa4.48□□□□□ -1.69
TRIM49B-202ENST00000622138 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
TRIM49B-202ENST00000622138 CSMD3Q7Z407 3707 aa4.47□□□□□ -1.69
TRIM49B-202ENST00000622138 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.7
TRIM49B-202ENST00000622138 KRTAP13-3Q3SY46 172 aa4.46□□□□□ -1.7
TRIM49B-202ENST00000622138 KRTAP9-6A0A140TA67 174 aa4.45□□□□□ -1.7
TRIM49B-202ENST00000622138 PANO1I0J062 215 aa4.44□□□□□ -1.7
TRIM49B-202ENST00000622138 IGLV7-43P04211 117 aa4.44□□□□□ -1.7
TRIM49B-202ENST00000622138 CDK2AP2O75956 126 aa4.43□□□□□ -1.7
TRIM49B-202ENST00000622138 IGLV5-52A0A0A0MRZ9 124 aa4.43□□□□□ -1.7
TRIM49B-202ENST00000622138 A8MUU9 505 aa4.43□□□□□ -1.7
TRIM49B-202ENST00000622138 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
TRIM49B-202ENST00000622138 APLNQ9ULZ1 77 aa4.42□□□□□ -1.7
TRIM49B-202ENST00000622138 P0C880 135 aa4.41□□□□□ -1.7
TRIM49B-202ENST00000622138 LCE2AQ5TA79 106 aaPredicted RBP4.41□□□□□ -1.7
TRIM49B-202ENST00000622138 UBE2DNLQ8IWF7 75 aa4.41□□□□□ -1.7
TRIM49B-202ENST00000622138 LINC00483Q53H64 154 aa4.41□□□□□ -1.7
TRIM49B-202ENST00000622138 STARD9Q9P2P6 4700 aa4.4□□□□□ -1.7
TRIM49B-202ENST00000622138 VPS13DQ5THJ4 4388 aa4.4□□□□□ -1.71
TRIM49B-202ENST00000622138 Q5W150 140 aa4.39□□□□□ -1.71
TRIM49B-202ENST00000622138 KRTAP13-1Q8IUC0 172 aa4.39□□□□□ -1.71
TRIM49B-202ENST00000622138 DNAH8Q96JB1 4490 aa4.39□□□□□ -1.71
TRIM49B-202ENST00000622138 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
TRIM49B-202ENST00000622138 C14orf177Q52M58 125 aa4.37□□□□□ -1.71
TRIM49B-202ENST00000622138 Q6ZRN7 208 aaPredicted RBP4.37□□□□□ -1.71
TRIM49B-202ENST00000622138 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.37□□□□□ -1.71
TRIM49B-202ENST00000622138 HECTD4Q9Y4D8 3996 aa4.37□□□□□ -1.71
TRIM49B-202ENST00000622138 DNAH17Q9UFH2 4485 aa4.37□□□□□ -1.71
TRIM49B-202ENST00000622138 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
TRIM49B-202ENST00000622138 LINC00304Q8N9R0 145 aa4.36□□□□□ -1.71
TRIM49B-202ENST00000622138 NBDYA0A0U1RRE5 68 aa4.36□□□□□ -1.71
TRIM49B-202ENST00000622138 LY6G6CO95867 125 aa4.36□□□□□ -1.71
TRIM49B-202ENST00000622138 IGLV9-49A0A0B4J1Y8 123 aa4.35□□□□□ -1.71
TRIM49B-202ENST00000622138 FRAS1Q86XX4 4008 aa4.35□□□□□ -1.71
TRIM49B-202ENST00000622138 DNAH2Q9P225 4427 aa4.34□□□□□ -1.71
TRIM49B-202ENST00000622138 FAM229AH3BQW9 127 aa4.34□□□□□ -1.71
TRIM49B-202ENST00000622138 IGKV2-30P06310 120 aa4.34□□□□□ -1.72
TRIM49B-202ENST00000622138 SPACA4Q8TDM5 124 aa4.34□□□□□ -1.72
TRIM49B-202ENST00000622138 DNHD1Q96M86 4753 aa4.34□□□□□ -1.72
TRIM49B-202ENST00000622138 PRKDCP78527 4128 aaKnown RBP4.33□□□□□ -1.72
TRIM49B-202ENST00000622138 ANAPC11Q9NYG5 84 aa4.32□□□□□ -1.72
TRIM49B-202ENST00000622138 FBN3Q75N90 2809 aa4.3□□□□□ -1.72
TRIM49B-202ENST00000622138 NUPR2A6NF83 97 aa4.3□□□□□ -1.72
TRIM49B-202ENST00000622138 H0YAA0 97 aa4.3□□□□□ -1.72
TRIM49B-202ENST00000622138 KMT2AQ03164 3969 aa4.3□□□□□ -1.72
TRIM49B-202ENST00000622138 WWC2-AS2Q96NR7 200 aa4.3□□□□□ -1.72
TRIM49B-202ENST00000622138 PSORS1C2Q9UIG4 136 aa4.29□□□□□ -1.72
TRIM49B-202ENST00000622138 A0A087WTM6 91 aa4.29□□□□□ -1.72
TRIM49B-202ENST00000622138 KRTAP16-1A8MUX0 517 aa4.29□□□□□ -1.72
TRIM49B-202ENST00000622138 C20orf166-AS1Q96NR2 134 aa4.29□□□□□ -1.72
TRIM49B-202ENST00000622138 IGKV2D-30A0A075B6S6 120 aa4.28□□□□□ -1.72
TRIM49B-202ENST00000622138 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
TRIM49B-202ENST00000622138 Q6ZSA8 131 aa4.26□□□□□ -1.73
TRIM49B-202ENST00000622138 DNAH11Q96DT5 4516 aa4.26□□□□□ -1.73
TRIM49B-202ENST00000622138 K7ERS5 55 aa4.26□□□□□ -1.73
TRIM49B-202ENST00000622138 DNAH5Q8TE73 4624 aa4.25□□□□□ -1.73
TRIM49B-202ENST00000622138 SPINT4Q6UDR6 99 aa4.25□□□□□ -1.73
TRIM49B-202ENST00000622138 MEGF8Q7Z7M0 2845 aa4.25□□□□□ -1.73
TRIM49B-202ENST00000622138 TGP01266 2768 aa4.24□□□□□ -1.73
TRIM49B-202ENST00000622138 DNAH6Q9C0G6 4158 aa4.24□□□□□ -1.73
TRIM49B-202ENST00000622138 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
TRIM49B-202ENST00000622138 SSBP3-AS1Q7Z2R9 100 aa4.23□□□□□ -1.73
TRIM49B-202ENST00000622138 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
TRIM49B-202ENST00000622138 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
TRIM49B-202ENST00000622138 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
TRIM49B-202ENST00000622138 SPINK6Q6UWN8 80 aa4.21□□□□□ -1.73
TRIM49B-202ENST00000622138 A0A1B0GU33 70 aa4.21□□□□□ -1.74
TRIM49B-202ENST00000622138 KRTAP17-1Q9BYP8 105 aa4.21□□□□□ -1.74
TRIM49B-202ENST00000622138 H1FX-AS1Q4G0G2 97 aa4.2□□□□□ -1.74
TRIM49B-202ENST00000622138 CIRBP-AS1Q8TBR5 109 aa4.19□□□□□ -1.74
TRIM49B-202ENST00000622138 LRP1BQ9NZR2 4599 aa4.18□□□□□ -1.74
TRIM49B-202ENST00000622138 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
TRIM49B-202ENST00000622138 SPINK1P00995 79 aa4.17□□□□□ -1.74
TRIM49B-202ENST00000622138 KRTAP21-3Q3LHN1 58 aa4.17□□□□□ -1.74
TRIM49B-202ENST00000622138 HYDINQ4G0P3 5121 aa4.15□□□□□ -1.74
TRIM49B-202ENST00000622138 J3QL48 77 aa4.15□□□□□ -1.75
TRIM49B-202ENST00000622138 KRTAP10-2P60368 255 aa4.15□□□□□ -1.75
TRIM49B-202ENST00000622138 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms