RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 COL27A1Q8IZC6 1860 aaPredicted RBP1.98□□□□□ -2.09
LPP-221ENST00000618621 C9orf163Q8N9P6 203 aa1.98□□□□□ -2.09
LPP-221ENST00000618621 DNAH5Q8TE73 4624 aa1.97□□□□□ -2.09
LPP-221ENST00000618621 PKD1L1Q8TDX9 2849 aa1.97□□□□□ -2.09
LPP-221ENST00000618621 Q96NJ1 140 aa1.97□□□□□ -2.09
LPP-221ENST00000618621 Q6ZR54 194 aa1.97□□□□□ -2.09
LPP-221ENST00000618621 APOBP04114 4563 aaKnown RBP1.97□□□□□ -2.09
LPP-221ENST00000618621 VPS13BQ7Z7G8 4022 aa1.97□□□□□ -2.09
LPP-221ENST00000618621 LINC00304Q8N9R0 145 aa1.97□□□□□ -2.09
LPP-221ENST00000618621 KRTAP1-1Q07627 177 aa1.96□□□□□ -2.1
LPP-221ENST00000618621 HECTD4Q9Y4D8 3996 aa1.96□□□□□ -2.1
LPP-221ENST00000618621 SPRR4Q96PI1 79 aa1.96□□□□□ -2.1
LPP-221ENST00000618621 C9orf92A6NGG3 77 aa1.96□□□□□ -2.1
LPP-221ENST00000618621 ANAPC11Q9NYG5 84 aa1.95□□□□□ -2.1
LPP-221ENST00000618621 A0A0G2JQZ4 141 aa1.95□□□□□ -2.1
LPP-221ENST00000618621 DNAH9Q9NYC9 4486 aa1.94□□□□□ -2.1
LPP-221ENST00000618621 LINC01558Q9Y6Z2 57 aa1.94□□□□□ -2.1
LPP-221ENST00000618621 Q8NDZ9 215 aa1.94□□□□□ -2.1
LPP-221ENST00000618621 K7EIL1 84 aa1.94□□□□□ -2.1
LPP-221ENST00000618621 DNAH8Q96JB1 4490 aa1.94□□□□□ -2.1
LPP-221ENST00000618621 DSCR10P59022 87 aa1.94□□□□□ -2.1
LPP-221ENST00000618621 CELSR1Q9NYQ6 3014 aa1.93□□□□□ -2.1
LPP-221ENST00000618621 A0A087WTM6 91 aa1.93□□□□□ -2.1
LPP-221ENST00000618621 VWFP04275 2813 aa1.93□□□□□ -2.1
LPP-221ENST00000618621 WWC2-AS2Q96NR7 200 aa1.93□□□□□ -2.1
LPP-221ENST00000618621 TGP01266 2768 aa1.93□□□□□ -2.1
LPP-221ENST00000618621 KMT2AQ03164 3969 aa1.92□□□□□ -2.1
LPP-221ENST00000618621 TENM2Q9NT68 2774 aa1.92□□□□□ -2.1
LPP-221ENST00000618621 CASC10Q5T4H9 136 aa1.92□□□□□ -2.1
LPP-221ENST00000618621 ADM2Q7Z4H4 148 aa1.92□□□□□ -2.1
LPP-221ENST00000618621 SPRR1AP35321 89 aa1.92□□□□□ -2.1
LPP-221ENST00000618621 Q5VV11 94 aa1.92□□□□□ -2.1
LPP-221ENST00000618621 C20orf166-AS1Q96NR2 134 aa1.92□□□□□ -2.1
LPP-221ENST00000618621 DYNC1H1Q14204 4646 aaKnown RBP1.91□□□□□ -2.1
LPP-221ENST00000618621 VPS13CQ709C8 3753 aa1.91□□□□□ -2.1
LPP-221ENST00000618621 SPATA8Q6RVD6 105 aa1.91□□□□□ -2.1
LPP-221ENST00000618621 LINC00472Q9H8W2 130 aa1.91□□□□□ -2.1
LPP-221ENST00000618621 FAM229BQ4G0N7 80 aa1.91□□□□□ -2.1
LPP-221ENST00000618621 Q8N9P0 234 aaPredicted RBP1.91□□□□□ -2.1
LPP-221ENST00000618621 CSAG1Q6PB30 78 aa1.91□□□□□ -2.1
LPP-221ENST00000618621 A0A1B0GU33 70 aa1.91□□□□□ -2.1
LPP-221ENST00000618621 A6NN06 94 aa1.91□□□□□ -2.1
LPP-221ENST00000618621 ALMS1Q8TCU4 4167 aa1.9□□□□□ -2.11
LPP-221ENST00000618621 DYNC2H1Q8NCM8 4307 aaKnown RBP1.9□□□□□ -2.11
LPP-221ENST00000618621 Q6ZSA8 131 aa1.9□□□□□ -2.11
LPP-221ENST00000618621 R4GN34 69 aa1.9□□□□□ -2.11
LPP-221ENST00000618621 DMDP11532 3685 aa1.9□□□□□ -2.11
LPP-221ENST00000618621 SACSQ9NZJ4 4579 aa1.9□□□□□ -2.11
LPP-221ENST00000618621 WDFY3Q8IZQ1 3526 aa1.9□□□□□ -2.11
LPP-221ENST00000618621 FAT3Q8TDW7 4589 aa1.9□□□□□ -2.11
LPP-221ENST00000618621 ZCCHC13Q8WW36 166 aaKnown RBP1.89□□□□□ -2.11
LPP-221ENST00000618621 SPRR1BP22528 89 aa1.89□□□□□ -2.11
LPP-221ENST00000618621 KRTAP26-1Q6PEX3 210 aa1.89□□□□□ -2.11
LPP-221ENST00000618621 SMR3BP02814 79 aaPredicted RBP1.88□□□□□ -2.11
LPP-221ENST00000618621 BIRC6Q9NR09 4857 aa1.88□□□□□ -2.11
LPP-221ENST00000618621 CSMD3Q7Z407 3707 aa1.88□□□□□ -2.11
LPP-221ENST00000618621 Q8N1X5 172 aa1.88□□□□□ -2.11
LPP-221ENST00000618621 NOTCH2NLQ7Z3S9 236 aa1.88□□□□□ -2.11
LPP-221ENST00000618621 LAMA5O15230 3695 aa1.88□□□□□ -2.11
LPP-221ENST00000618621 KRTAP19-4Q3LI73 84 aa1.88□□□□□ -2.11
LPP-221ENST00000618621 HRNRQ86YZ3 2850 aaPredicted RBP1.87□□□□□ -2.11
LPP-221ENST00000618621 ZFHX4Q86UP3 3567 aa1.87□□□□□ -2.11
LPP-221ENST00000618621 ZNF469Q96JG9 3925 aaPredicted RBP1.87□□□□□ -2.11
LPP-221ENST00000618621 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.87□□□□□ -2.11
LPP-221ENST00000618621 KRTAP29-1A8MX34 341 aaPredicted RBP1.86□□□□□ -2.11
LPP-221ENST00000618621 LRP1BQ9NZR2 4599 aa1.86□□□□□ -2.11
LPP-221ENST00000618621 PKHD1L1Q86WI1 4243 aa1.86□□□□□ -2.11
LPP-221ENST00000618621 FAT1Q14517 4588 aa1.86□□□□□ -2.11
LPP-221ENST00000618621 PLAC8Q9NZF1 115 aa1.86□□□□□ -2.11
LPP-221ENST00000618621 SMG1Q96Q15 3661 aaKnown RBP1.86□□□□□ -2.11
LPP-221ENST00000618621 Q5VSD8 79 aa1.86□□□□□ -2.11
LPP-221ENST00000618621 Q5W150 140 aa1.86□□□□□ -2.11
LPP-221ENST00000618621 LCE6AA0A183 80 aa1.85□□□□□ -2.11
LPP-221ENST00000618621 KRTAP4-16G5E9R7 235 aaPredicted RBP1.85□□□□□ -2.11
LPP-221ENST00000618621 OTOGQ6ZRI0 2925 aa1.85□□□□□ -2.11
LPP-221ENST00000618621 MMP24-AS1A0A0U1RRL7 71 aa1.85□□□□□ -2.11
LPP-221ENST00000618621 FBN1P35555 2871 aaKnown RBP1.84□□□□□ -2.11
LPP-221ENST00000618621 SPENQ96T58 3664 aaKnown RBP1.84□□□□□ -2.12
LPP-221ENST00000618621 LYSTQ99698 3801 aa1.83□□□□□ -2.12
LPP-221ENST00000618621 DNHD1Q96M86 4753 aa1.83□□□□□ -2.12
LPP-221ENST00000618621 MYCBP2O75592 4640 aa1.83□□□□□ -2.12
LPP-221ENST00000618621 FAT2Q9NYQ8 4349 aa1.82□□□□□ -2.12
LPP-221ENST00000618621 FBN3Q75N90 2809 aa1.82□□□□□ -2.12
LPP-221ENST00000618621 KRTAP23-1A1A580 65 aa1.82□□□□□ -2.12
LPP-221ENST00000618621 S4R3F8 94 aa1.82□□□□□ -2.12
LPP-221ENST00000618621 A8MU10 97 aa1.82□□□□□ -2.12
LPP-221ENST00000618621 ASPMQ8IZT6 3477 aa1.81□□□□□ -2.12
LPP-221ENST00000618621 FLGP20930 4061 aaPredicted RBP1.81□□□□□ -2.12
LPP-221ENST00000618621 RYR3Q15413 4870 aa1.81□□□□□ -2.12
LPP-221ENST00000618621 KRTAP7-1Q8IUC3 87 aa1.8□□□□□ -2.12
LPP-221ENST00000618621 COL7A1Q02388 2944 aa1.8□□□□□ -2.12
LPP-221ENST00000618621 RPL37P61927 97 aaKnown RBP1.8□□□□□ -2.12
LPP-221ENST00000618621 RYR1P21817 5038 aa1.79□□□□□ -2.12
LPP-221ENST00000618621 CUBNO60494 3623 aa1.79□□□□□ -2.12
LPP-221ENST00000618621 SVEP1Q4LDE5 3571 aa1.78□□□□□ -2.12
LPP-221ENST00000618621 PKHD1P08F94 4074 aa1.78□□□□□ -2.12
LPP-221ENST00000618621 KRTAP1-5Q9BYS1 174 aa1.78□□□□□ -2.12
LPP-221ENST00000618621 KRTAP10-1P60331 282 aa1.78□□□□□ -2.12
LPP-221ENST00000618621 C10orf95Q9H7T3 257 aa1.78□□□□□ -2.12
LPP-221ENST00000618621 M0QZ58 72 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms