RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 VPS13DQ5THJ4 4388 aa1.77□□□□□ -2.13
SMC5-204ENST00000618375 HRNRQ86YZ3 2850 aaPredicted RBP1.77□□□□□ -2.13
SMC5-204ENST00000618375 NCOR2Q9Y618 2525 aa1.77□□□□□ -2.13
SMC5-204ENST00000618375 FRAS1Q86XX4 4008 aa1.77□□□□□ -2.13
SMC5-204ENST00000618375 BSNQ9UPA5 3926 aa1.77□□□□□ -2.13
SMC5-204ENST00000618375 KRTAP5-9P26371 169 aa1.77□□□□□ -2.13
SMC5-204ENST00000618375 UBE2DNLQ8IWF7 75 aa1.77□□□□□ -2.13
SMC5-204ENST00000618375 CREBBPQ92793 2442 aa1.77□□□□□ -2.13
SMC5-204ENST00000618375 ADGRG4Q8IZF6 3080 aa1.77□□□□□ -2.13
SMC5-204ENST00000618375 FLG2Q5D862 2391 aaPredicted RBP1.76□□□□□ -2.13
SMC5-204ENST00000618375 LRBAP50851 2863 aa1.76□□□□□ -2.13
SMC5-204ENST00000618375 PRRC2CQ9Y520 2896 aaKnown RBP1.76□□□□□ -2.13
SMC5-204ENST00000618375 KRTAP12-2P59991 146 aa1.76□□□□□ -2.13
SMC5-204ENST00000618375 R4GN34 69 aa1.76□□□□□ -2.13
SMC5-204ENST00000618375 TRRAPQ9Y4A5 3859 aa1.75□□□□□ -2.13
SMC5-204ENST00000618375 KRTAP13-4Q3LI77 160 aa1.75□□□□□ -2.13
SMC5-204ENST00000618375 PP632Q6XCG6 107 aa1.75□□□□□ -2.13
SMC5-204ENST00000618375 SPG11Q96JI7 2443 aa1.74□□□□□ -2.13
SMC5-204ENST00000618375 KRTAP12-1P59990 96 aa1.74□□□□□ -2.13
SMC5-204ENST00000618375 APLNQ9ULZ1 77 aa1.74□□□□□ -2.13
SMC5-204ENST00000618375 MYO15AQ9UKN7 3530 aa1.74□□□□□ -2.13
SMC5-204ENST00000618375 LAMA5O15230 3695 aa1.73□□□□□ -2.13
SMC5-204ENST00000618375 A0A0D9SG42 100 aa1.73□□□□□ -2.13
SMC5-204ENST00000618375 SPRR5A0A1B0GTR4 108 aa1.73□□□□□ -2.13
SMC5-204ENST00000618375 GVINP1Q7Z2Y8 2422 aa1.73□□□□□ -2.13
SMC5-204ENST00000618375 ZFHX2Q9C0A1 2572 aaPredicted RBP1.73□□□□□ -2.13
SMC5-204ENST00000618375 SPTAN1Q13813 2472 aaKnown RBP1.72□□□□□ -2.13
SMC5-204ENST00000618375 FN1P02751 2386 aaKnown RBP1.71□□□□□ -2.14
SMC5-204ENST00000618375 NF1P21359 2839 aa1.71□□□□□ -2.14
SMC5-204ENST00000618375 CRYBG3Q68DQ2 2970 aa1.71□□□□□ -2.14
SMC5-204ENST00000618375 CSPG4Q6UVK1 2322 aa1.71□□□□□ -2.14
SMC5-204ENST00000618375 HIVEP2P31629 2446 aa1.7□□□□□ -2.14
SMC5-204ENST00000618375 SETXQ7Z333 2677 aaKnown RBP1.7□□□□□ -2.14
SMC5-204ENST00000618375 M0QZ58 72 aa1.7□□□□□ -2.14
SMC5-204ENST00000618375 RPS29P62273 56 aaKnown RBP1.7□□□□□ -2.14
SMC5-204ENST00000618375 ANK3Q12955 4377 aaKnown RBP1.7□□□□□ -2.14
SMC5-204ENST00000618375 ANK2Q01484 3957 aa1.69□□□□□ -2.14
SMC5-204ENST00000618375 APCP25054 2843 aa1.69□□□□□ -2.14
SMC5-204ENST00000618375 TLN1Q9Y490 2541 aaKnown RBP1.69□□□□□ -2.14
SMC5-204ENST00000618375 VPS13CQ709C8 3753 aa1.69□□□□□ -2.14
SMC5-204ENST00000618375 RELNP78509 3460 aa1.68□□□□□ -2.14
SMC5-204ENST00000618375 HIVEP3Q5T1R4 2406 aa1.68□□□□□ -2.14
SMC5-204ENST00000618375 ATRXP46100 2492 aa1.68□□□□□ -2.14
SMC5-204ENST00000618375 UBR5O95071 2799 aaPredicted RBP1.68□□□□□ -2.14
SMC5-204ENST00000618375 TLN2Q9Y4G6 2542 aa1.68□□□□□ -2.14
SMC5-204ENST00000618375 FBN1P35555 2871 aaKnown RBP1.68□□□□□ -2.14
SMC5-204ENST00000618375 DNAH7Q8WXX0 4024 aa1.68□□□□□ -2.14
SMC5-204ENST00000618375 PRKDCP78527 4128 aaKnown RBP1.68□□□□□ -2.14
SMC5-204ENST00000618375 F8P00451 2351 aa1.67□□□□□ -2.14
SMC5-204ENST00000618375 CEP290O15078 2479 aa1.67□□□□□ -2.14
SMC5-204ENST00000618375 ASPMQ8IZT6 3477 aa1.67□□□□□ -2.14
SMC5-204ENST00000618375 OTOGLQ3ZCN5 2332 aa1.67□□□□□ -2.14
SMC5-204ENST00000618375 OBSCNQ5VST9 7968 aa1.67□□□□□ -2.14
SMC5-204ENST00000618375 DNAH3Q8TD57 4116 aa1.67□□□□□ -2.14
SMC5-204ENST00000618375 RIF1Q5UIP0 2472 aaKnown RBP1.66□□□□□ -2.14
SMC5-204ENST00000618375 VWFP04275 2813 aa1.66□□□□□ -2.14
SMC5-204ENST00000618375 NAV2Q8IVL1 2488 aa1.66□□□□□ -2.14
SMC5-204ENST00000618375 UTP20O75691 2785 aaKnown RBP1.66□□□□□ -2.14
SMC5-204ENST00000618375 CMYA5Q8N3K9 4069 aa1.66□□□□□ -2.14
SMC5-204ENST00000618375 DNAH8Q96JB1 4490 aa1.65□□□□□ -2.14
SMC5-204ENST00000618375 DYNC2H1Q8NCM8 4307 aaKnown RBP1.65□□□□□ -2.15
SMC5-204ENST00000618375 EYSQ5T1H1 3165 aa1.65□□□□□ -2.15
SMC5-204ENST00000618375 KRTAP10-8P60410 259 aa1.65□□□□□ -2.15
SMC5-204ENST00000618375 KRTAP13-2Q52LG2 175 aa1.65□□□□□ -2.15
SMC5-204ENST00000618375 LCE3EQ5T5B0 92 aa1.65□□□□□ -2.15
SMC5-204ENST00000618375 LCE3AQ5TA76 89 aa1.65□□□□□ -2.15
SMC5-204ENST00000618375 TEX15Q9BXT5 2789 aa1.65□□□□□ -2.15
SMC5-204ENST00000618375 MEGF8Q7Z7M0 2845 aa1.65□□□□□ -2.15
SMC5-204ENST00000618375 JMJD1CQ15652 2540 aa1.65□□□□□ -2.15
SMC5-204ENST00000618375 ZNF462Q96JM2 2506 aa1.65□□□□□ -2.15
SMC5-204ENST00000618375 DNAH6Q9C0G6 4158 aa1.64□□□□□ -2.15
SMC5-204ENST00000618375 DNAH17Q9UFH2 4485 aa1.64□□□□□ -2.15
SMC5-204ENST00000618375 MUC6Q6W4X9 2439 aa1.64□□□□□ -2.15
SMC5-204ENST00000618375 Q5VSD8 79 aa1.64□□□□□ -2.15
SMC5-204ENST00000618375 KRTAP4-3Q9BYR4 195 aa1.64□□□□□ -2.15
SMC5-204ENST00000618375 DNAH11Q96DT5 4516 aa1.64□□□□□ -2.15
SMC5-204ENST00000618375 SVEP1Q4LDE5 3571 aa1.63□□□□□ -2.15
SMC5-204ENST00000618375 LYSTQ99698 3801 aa1.63□□□□□ -2.15
SMC5-204ENST00000618375 PTPN13Q12923 2485 aa1.63□□□□□ -2.15
SMC5-204ENST00000618375 CCDC168Q8NDH2 2452 aa1.62□□□□□ -2.15
SMC5-204ENST00000618375 NIPBLQ6KC79 2804 aaeCLIP1.62□□□□□ -2.15
SMC5-204ENST00000618375 USP9XQ93008 2570 aaPredicted RBP1.62□□□□□ -2.15
SMC5-204ENST00000618375 TENM4Q6N022 2769 aa1.61□□□□□ -2.15
SMC5-204ENST00000618375 ANKRD11Q6UB99 2663 aaPredicted RBP1.61□□□□□ -2.15
SMC5-204ENST00000618375 GCN1Q92616 2671 aaKnown RBP1.61□□□□□ -2.15
SMC5-204ENST00000618375 HUWE1Q7Z6Z7 4374 aaKnown RBP1.61□□□□□ -2.15
SMC5-204ENST00000618375 SONP18583 2426 aaKnown RBP1.6□□□□□ -2.15
SMC5-204ENST00000618375 SRRM2Q9UQ35 2752 aaKnown RBP1.6□□□□□ -2.15
SMC5-204ENST00000618375 MYCBP2O75592 4640 aa1.6□□□□□ -2.15
SMC5-204ENST00000618375 NBEAL2Q6ZNJ1 2754 aa1.6□□□□□ -2.15
SMC5-204ENST00000618375 CSMD3Q7Z407 3707 aa1.6□□□□□ -2.15
SMC5-204ENST00000618375 ZFYVE26Q68DK2 2539 aa1.6□□□□□ -2.15
SMC5-204ENST00000618375 DNAH2Q9P225 4427 aa1.59□□□□□ -2.15
SMC5-204ENST00000618375 CUBNO60494 3623 aa1.59□□□□□ -2.15
SMC5-204ENST00000618375 HECTD4Q9Y4D8 3996 aa1.59□□□□□ -2.15
SMC5-204ENST00000618375 KRTAP1-4P0C5Y4 121 aa1.59□□□□□ -2.15
SMC5-204ENST00000618375 COL6A5A8TX70 2615 aa1.59□□□□□ -2.16
SMC5-204ENST00000618375 FAM208BQ5VWN6 2430 aa1.59□□□□□ -2.16
SMC5-204ENST00000618375 DOPEY1Q5JWR5 2465 aa1.58□□□□□ -2.16
SMC5-204ENST00000618375 CENPEQ02224 2701 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms