RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 LINC00472Q9H8W2 130 aa8.22□□□□□ -1.09
UBXN1-218ENST00000616865 CRCT1Q9UGL9 99 aa8.22□□□□□ -1.09
UBXN1-218ENST00000616865 LCE2DQ5TA82 110 aaPredicted RBP8.2□□□□□ -1.1
UBXN1-218ENST00000616865 KRTAP4-1Q9BYQ7 146 aa8.2□□□□□ -1.1
UBXN1-218ENST00000616865 LINC00846Q9NV44 126 aa8.19□□□□□ -1.1
UBXN1-218ENST00000616865 ACYP1P07311 99 aa8.18□□□□□ -1.1
UBXN1-218ENST00000616865 SEC61BP60468 96 aaKnown RBP8.18□□□□□ -1.1
UBXN1-218ENST00000616865 Q6ZVQ6 151 aa8.18□□□□□ -1.1
UBXN1-218ENST00000616865 C9orf92A6NGG3 77 aa8.17□□□□□ -1.1
UBXN1-218ENST00000616865 J3QR89 54 aa8.17□□□□□ -1.1
UBXN1-218ENST00000616865 NDUFB1O75438 58 aa8.17□□□□□ -1.1
UBXN1-218ENST00000616865 BPY2O14599 106 aa8.16□□□□□ -1.1
UBXN1-218ENST00000616865 FAM240AA0A1B0GVK7 77 aa8.14□□□□□ -1.11
UBXN1-218ENST00000616865 FSIP2Q5CZC0 6907 aa8.13□□□□□ -1.11
UBXN1-218ENST00000616865 IGHV6-1A0A0B4J1U7 121 aa8.13□□□□□ -1.11
UBXN1-218ENST00000616865 A0A1B0GVX0 72 aa8.11□□□□□ -1.11
UBXN1-218ENST00000616865 A8MWP4 228 aa8.11□□□□□ -1.11
UBXN1-218ENST00000616865 DSCR10P59022 87 aa8.09□□□□□ -1.11
UBXN1-218ENST00000616865 LINC00313P59037 77 aa8.09□□□□□ -1.11
UBXN1-218ENST00000616865 XP32Q5T750 250 aa8.09□□□□□ -1.11
UBXN1-218ENST00000616865 C8orf87E5RJ46 101 aa8.08□□□□□ -1.12
UBXN1-218ENST00000616865 IGKV3D-7A0A0C4DH55 119 aa8.06□□□□□ -1.12
UBXN1-218ENST00000616865 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
UBXN1-218ENST00000616865 K7ERU9 68 aa8.05□□□□□ -1.12
UBXN1-218ENST00000616865 PRR15Q8IV56 129 aa8.05□□□□□ -1.12
UBXN1-218ENST00000616865 K7EQZ3 153 aa8.03□□□□□ -1.12
UBXN1-218ENST00000616865 CXCL6P80162 114 aa8.03□□□□□ -1.12
UBXN1-218ENST00000616865 Q8N9L7 120 aa8.02□□□□□ -1.13
UBXN1-218ENST00000616865 C8orf17Q9NRJ1 99 aa8.02□□□□□ -1.13
UBXN1-218ENST00000616865 KRTAP19-2Q3LHN2 52 aa8.01□□□□□ -1.13
UBXN1-218ENST00000616865 ATP5EP2Q5VTU8 51 aa8.01□□□□□ -1.13
UBXN1-218ENST00000616865 NOTCH2NLQ7Z3S9 236 aa8.01□□□□□ -1.13
UBXN1-218ENST00000616865 LINC00643Q86TS7 51 aa8□□□□□ -1.13
UBXN1-218ENST00000616865 MT1HP80294 61 aa7.99□□□□□ -1.13
UBXN1-218ENST00000616865 MMP24-AS1A0A0U1RRL7 71 aa7.96□□□□□ -1.14
UBXN1-218ENST00000616865 RPL37P61927 97 aaKnown RBP7.96□□□□□ -1.14
UBXN1-218ENST00000616865 hDV103S1A0JD37 113 aa7.95□□□□□ -1.14
UBXN1-218ENST00000616865 Q75L30 129 aa7.95□□□□□ -1.14
UBXN1-218ENST00000616865 KRTAP16-1A8MUX0 517 aa7.94□□□□□ -1.14
UBXN1-218ENST00000616865 HIST1H4AP62805 103 aaKnown RBP7.94□□□□□ -1.14
UBXN1-218ENST00000616865 PCOTHQ58A44 107 aa7.94□□□□□ -1.14
UBXN1-218ENST00000616865 CASC2Q6XLA1 102 aa7.94□□□□□ -1.14
UBXN1-218ENST00000616865 WFDC13Q8IUB5 93 aa7.94□□□□□ -1.14
UBXN1-218ENST00000616865 C20orf166-AS1Q96NR2 134 aa7.94□□□□□ -1.14
UBXN1-218ENST00000616865 ATP11AUNQ6ZP68 121 aa7.93□□□□□ -1.14
UBXN1-218ENST00000616865 TMEM254Q8TBM7 123 aa7.93□□□□□ -1.14
UBXN1-218ENST00000616865 A8MUU9 505 aa7.92□□□□□ -1.14
UBXN1-218ENST00000616865 MRPL34Q9BQ48 92 aaKnown RBP7.92□□□□□ -1.14
UBXN1-218ENST00000616865 HCG22E2RYF7 251 aa7.91□□□□□ -1.14
UBXN1-218ENST00000616865 NDUFS5O43920 106 aa7.91□□□□□ -1.14
UBXN1-218ENST00000616865 LORP23490 312 aaPredicted RBP7.9□□□□□ -1.14
UBXN1-218ENST00000616865 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
UBXN1-218ENST00000616865 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
UBXN1-218ENST00000616865 A0A087WVE0 104 aa7.81□□□□□ -1.16
UBXN1-218ENST00000616865 KRTAP9-7A8MTY7 169 aa7.81□□□□□ -1.16
UBXN1-218ENST00000616865 ZCCHC13Q8WW36 166 aaKnown RBP7.81□□□□□ -1.16
UBXN1-218ENST00000616865 FLGP20930 4061 aaPredicted RBP7.81□□□□□ -1.16
UBXN1-218ENST00000616865 M0R2T5 61 aa7.79□□□□□ -1.16
UBXN1-218ENST00000616865 MT-ATP8P03928 68 aa7.79□□□□□ -1.16
UBXN1-218ENST00000616865 IMUPQ9GZP8 106 aa7.77□□□□□ -1.17
UBXN1-218ENST00000616865 COX6B2Q6YFQ2 88 aa7.76□□□□□ -1.17
UBXN1-218ENST00000616865 TP53AIP1Q9HCN2 124 aa7.75□□□□□ -1.17
UBXN1-218ENST00000616865 SCGB1A1P11684 91 aa7.72□□□□□ -1.17
UBXN1-218ENST00000616865 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.69□□□□□ -1.18
UBXN1-218ENST00000616865 Q5W150 140 aa7.67□□□□□ -1.18
UBXN1-218ENST00000616865 UQCRQO14949 82 aa7.66□□□□□ -1.18
UBXN1-218ENST00000616865 IGKV2D-30A0A075B6S6 120 aa7.64□□□□□ -1.19
UBXN1-218ENST00000616865 FAM236AA0A1B0GUQ0 79 aa7.64□□□□□ -1.19
UBXN1-218ENST00000616865 FAM236BA0A1B0GV22 79 aa7.64□□□□□ -1.19
UBXN1-218ENST00000616865 IGKV2-30P06310 120 aa7.64□□□□□ -1.19
UBXN1-218ENST00000616865 SPINK7P58062 85 aa7.64□□□□□ -1.19
UBXN1-218ENST00000616865 TRAV22A0A0B4J277 110 aa7.63□□□□□ -1.19
UBXN1-218ENST00000616865 C7orf65Q6ZTY9 151 aa7.61□□□□□ -1.19
UBXN1-218ENST00000616865 H0Y9P7 68 aa7.6□□□□□ -1.19
UBXN1-218ENST00000616865 OCR1Q9BZK8 76 aa7.59□□□□□ -1.19
UBXN1-218ENST00000616865 ATOX1O00244 68 aa7.58□□□□□ -1.2
UBXN1-218ENST00000616865 SMIM20Q8N5G0 67 aa7.58□□□□□ -1.2
UBXN1-218ENST00000616865 USH2AO75445 5202 aa7.58□□□□□ -1.2
UBXN1-218ENST00000616865 SSPOA2VEC9 5147 aa7.58□□□□□ -1.2
UBXN1-218ENST00000616865 MP68P56378 58 aa7.57□□□□□ -1.2
UBXN1-218ENST00000616865 RBM12B-AS1Q9P1G2 102 aa7.57□□□□□ -1.2
UBXN1-218ENST00000616865 FAM236DA0A1B0GTK5 79 aa7.55□□□□□ -1.2
UBXN1-218ENST00000616865 FAM236CP0DP71 79 aa7.55□□□□□ -1.2
UBXN1-218ENST00000616865 LOC101927531A0A1B0GV80 90 aa7.54□□□□□ -1.2
UBXN1-218ENST00000616865 C5orf47Q569G3 176 aa7.54□□□□□ -1.2
UBXN1-218ENST00000616865 TRAV7A0A075B6U4 112 aa7.53□□□□□ -1.2
UBXN1-218ENST00000616865 HRES1P13985 223 aa7.53□□□□□ -1.2
UBXN1-218ENST00000616865 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
UBXN1-218ENST00000616865 C1orf64Q8NEQ6 169 aa7.51□□□□□ -1.21
UBXN1-218ENST00000616865 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
UBXN1-218ENST00000616865 H3BPC8 53 aa7.48□□□□□ -1.21
UBXN1-218ENST00000616865 CYP4F30PQ9H0H9 118 aa7.48□□□□□ -1.21
UBXN1-218ENST00000616865 MPLKIPQ8TAP9 179 aa7.45□□□□□ -1.22
UBXN1-218ENST00000616865 C4orf26Q17RF5 130 aa7.43□□□□□ -1.22
UBXN1-218ENST00000616865 SERP2Q8N6R1 65 aa7.43□□□□□ -1.22
UBXN1-218ENST00000616865 FCGBPQ9Y6R7 5405 aaPredicted RBP7.4□□□□□ -1.22
UBXN1-218ENST00000616865 MT2AP02795 61 aa7.36□□□□□ -1.23
UBXN1-218ENST00000616865 KLKP1Q107X0 134 aa7.36□□□□□ -1.23
UBXN1-218ENST00000616865 C20orf197Q8N268 126 aa7.35□□□□□ -1.23
UBXN1-218ENST00000616865 ANAPC13Q9BS18 74 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms