RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 ZCCHC13Q8WW36 166 aaKnown RBP9.48□□□□□ -0.89
SEMA3B-212ENST00000616701 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
SEMA3B-212ENST00000616701 IGLV9-49A0A0B4J1Y8 123 aa9.48□□□□□ -0.89
SEMA3B-212ENST00000616701 Q75L30 129 aa9.47□□□□□ -0.89
SEMA3B-212ENST00000616701 LCE6AA0A183 80 aa9.47□□□□□ -0.89
SEMA3B-212ENST00000616701 SPRR1BP22528 89 aa9.46□□□□□ -0.89
SEMA3B-212ENST00000616701 IGLV8-61A0A075B6I0 122 aa9.45□□□□□ -0.9
SEMA3B-212ENST00000616701 FAT2Q9NYQ8 4349 aa9.44□□□□□ -0.9
SEMA3B-212ENST00000616701 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
SEMA3B-212ENST00000616701 PKD1P98161 4303 aa9.42□□□□□ -0.9
SEMA3B-212ENST00000616701 A0A1B0GW54 56 aa9.42□□□□□ -0.9
SEMA3B-212ENST00000616701 DSCR10P59022 87 aa9.42□□□□□ -0.9
SEMA3B-212ENST00000616701 LOC101927531A0A1B0GV80 90 aa9.41□□□□□ -0.9
SEMA3B-212ENST00000616701 K7EQZ3 153 aa9.41□□□□□ -0.9
SEMA3B-212ENST00000616701 SPINK7P58062 85 aa9.41□□□□□ -0.9
SEMA3B-212ENST00000616701 SPAG11AQ6PDA7 123 aa9.41□□□□□ -0.9
SEMA3B-212ENST00000616701 KRTAP10-1P60331 282 aa9.4□□□□□ -0.9
SEMA3B-212ENST00000616701 ZNF706Q9Y5V0 76 aaPredicted RBP9.4□□□□□ -0.9
SEMA3B-212ENST00000616701 ZNF861PO60384 105 aa9.39□□□□□ -0.91
SEMA3B-212ENST00000616701 RPL37AP61513 92 aaKnown RBP9.39□□□□□ -0.91
SEMA3B-212ENST00000616701 NDUFB1O75438 58 aa9.37□□□□□ -0.91
SEMA3B-212ENST00000616701 MP68P56378 58 aa9.37□□□□□ -0.91
SEMA3B-212ENST00000616701 SACSQ9NZJ4 4579 aa9.36□□□□□ -0.91
SEMA3B-212ENST00000616701 A0A0A0MQY5 61 aa9.35□□□□□ -0.91
SEMA3B-212ENST00000616701 IGLV7-43P04211 117 aa9.35□□□□□ -0.91
SEMA3B-212ENST00000616701 WFDC13Q8IUB5 93 aa9.34□□□□□ -0.91
SEMA3B-212ENST00000616701 LRP1BQ9NZR2 4599 aa9.34□□□□□ -0.91
SEMA3B-212ENST00000616701 CASC2Q6XLA1 102 aa9.34□□□□□ -0.91
SEMA3B-212ENST00000616701 LINC00483Q53H64 154 aa9.33□□□□□ -0.92
SEMA3B-212ENST00000616701 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
SEMA3B-212ENST00000616701 COA5Q86WW8 74 aa9.32□□□□□ -0.92
SEMA3B-212ENST00000616701 PKHD1P08F94 4074 aa9.28□□□□□ -0.92
SEMA3B-212ENST00000616701 LINC00472Q9H8W2 130 aa9.27□□□□□ -0.93
SEMA3B-212ENST00000616701 Q6ZSA8 131 aa9.27□□□□□ -0.93
SEMA3B-212ENST00000616701 VPS13BQ7Z7G8 4022 aa9.23□□□□□ -0.93
SEMA3B-212ENST00000616701 H0Y9P7 68 aa9.21□□□□□ -0.93
SEMA3B-212ENST00000616701 A8MWP4 228 aa9.2□□□□□ -0.94
SEMA3B-212ENST00000616701 CSAG1Q6PB30 78 aa9.2□□□□□ -0.94
SEMA3B-212ENST00000616701 Q96NJ1 140 aa9.2□□□□□ -0.94
SEMA3B-212ENST00000616701 PCOTHQ58A44 107 aa9.18□□□□□ -0.94
SEMA3B-212ENST00000616701 PLA2G1BP04054 148 aaKnown RBP9.18□□□□□ -0.94
SEMA3B-212ENST00000616701 A0A087X002 238 aa9.18□□□□□ -0.94
SEMA3B-212ENST00000616701 SPANXA2-OT1Q8N9U9 137 aa9.17□□□□□ -0.94
SEMA3B-212ENST00000616701 LINC01558Q9Y6Z2 57 aa9.17□□□□□ -0.94
SEMA3B-212ENST00000616701 SPINK6Q6UWN8 80 aa9.15□□□□□ -0.94
SEMA3B-212ENST00000616701 DYNC1H1Q14204 4646 aaKnown RBP9.14□□□□□ -0.95
SEMA3B-212ENST00000616701 SMR3BP02814 79 aaPredicted RBP9.13□□□□□ -0.95
SEMA3B-212ENST00000616701 KRTAP29-1A8MX34 341 aaPredicted RBP9.13□□□□□ -0.95
SEMA3B-212ENST00000616701 KRTAP13-2Q52LG2 175 aa9.12□□□□□ -0.95
SEMA3B-212ENST00000616701 KMT2CQ8NEZ4 4911 aaKnown RBP9.12□□□□□ -0.95
SEMA3B-212ENST00000616701 IGHV6-1A0A0B4J1U7 121 aa9.12□□□□□ -0.95
SEMA3B-212ENST00000616701 MMP24-AS1A0A0U1RRL7 71 aa9.1□□□□□ -0.95
SEMA3B-212ENST00000616701 RYR2Q92736 4967 aa9.08□□□□□ -0.96
SEMA3B-212ENST00000616701 CDK2AP2O75956 126 aa9.07□□□□□ -0.96
SEMA3B-212ENST00000616701 NOTCH2NLQ7Z3S9 236 aa9.07□□□□□ -0.96
SEMA3B-212ENST00000616701 KRTAP1-4P0C5Y4 121 aa9.06□□□□□ -0.96
SEMA3B-212ENST00000616701 SSBP3-AS1Q7Z2R9 100 aa9.06□□□□□ -0.96
SEMA3B-212ENST00000616701 H3BPC8 53 aa9.06□□□□□ -0.96
SEMA3B-212ENST00000616701 C8orf17Q9NRJ1 99 aa9.05□□□□□ -0.96
SEMA3B-212ENST00000616701 A0A1B0GVX0 72 aa9.04□□□□□ -0.96
SEMA3B-212ENST00000616701 FAT1Q14517 4588 aa9.04□□□□□ -0.96
SEMA3B-212ENST00000616701 A0A1B0GVY2 172 aa9.04□□□□□ -0.96
SEMA3B-212ENST00000616701 IGLV7-46A0A075B6I9 117 aa9.02□□□□□ -0.97
SEMA3B-212ENST00000616701 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
SEMA3B-212ENST00000616701 HRES1P13985 223 aa8.96□□□□□ -0.97
SEMA3B-212ENST00000616701 TYMSOSQ8TAI1 123 aa8.96□□□□□ -0.98
SEMA3B-212ENST00000616701 ASB16-AS1Q495Z4 193 aa8.94□□□□□ -0.98
SEMA3B-212ENST00000616701 MRPL34Q9BQ48 92 aaKnown RBP8.93□□□□□ -0.98
SEMA3B-212ENST00000616701 ROMO1P60602 79 aa8.91□□□□□ -0.98
SEMA3B-212ENST00000616701 RYR3Q15413 4870 aa8.87□□□□□ -0.99
SEMA3B-212ENST00000616701 MIR22HGQ0VDD5 57 aa8.85□□□□□ -0.99
SEMA3B-212ENST00000616701 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
SEMA3B-212ENST00000616701 TP53AIP1Q9HCN2 124 aa8.85□□□□□ -0.99
SEMA3B-212ENST00000616701 FLG2Q5D862 2391 aaPredicted RBP8.84□□□□□ -0.99
SEMA3B-212ENST00000616701 Q5W150 140 aa8.82□□□□□ -1
SEMA3B-212ENST00000616701 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
SEMA3B-212ENST00000616701 SPINK1P00995 79 aa8.79□□□□□ -1
SEMA3B-212ENST00000616701 A0A1B0GU69 56 aa8.79□□□□□ -1
SEMA3B-212ENST00000616701 SPATA8Q6RVD6 105 aa8.76□□□□□ -1.01
SEMA3B-212ENST00000616701 J3QL48 77 aa8.76□□□□□ -1.01
SEMA3B-212ENST00000616701 P0C880 135 aa8.75□□□□□ -1.01
SEMA3B-212ENST00000616701 HSPG2P98160 4391 aa8.73□□□□□ -1.01
SEMA3B-212ENST00000616701 KRTAP16-1A8MUX0 517 aa8.72□□□□□ -1.01
SEMA3B-212ENST00000616701 PKHD1L1Q86WI1 4243 aa8.71□□□□□ -1.01
SEMA3B-212ENST00000616701 LRP1Q07954 4544 aaKnown RBP8.71□□□□□ -1.02
SEMA3B-212ENST00000616701 KRTAP13-3Q3SY46 172 aa8.7□□□□□ -1.02
SEMA3B-212ENST00000616701 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
SEMA3B-212ENST00000616701 UQCR11O14957 56 aa8.7□□□□□ -1.02
SEMA3B-212ENST00000616701 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
SEMA3B-212ENST00000616701 Q5VSD8 79 aa8.67□□□□□ -1.02
SEMA3B-212ENST00000616701 C9orf92A6NGG3 77 aa8.65□□□□□ -1.02
SEMA3B-212ENST00000616701 KRTAP17-1Q9BYP8 105 aa8.65□□□□□ -1.02
SEMA3B-212ENST00000616701 KRTAP25-1Q3LHN0 102 aa8.65□□□□□ -1.02
SEMA3B-212ENST00000616701 RYR1P21817 5038 aa8.62□□□□□ -1.03
SEMA3B-212ENST00000616701 RPS29P62273 56 aaKnown RBP8.61□□□□□ -1.03
SEMA3B-212ENST00000616701 KIAA1109Q2LD37 5005 aa8.61□□□□□ -1.03
SEMA3B-212ENST00000616701 IGKV2D-30A0A075B6S6 120 aa8.59□□□□□ -1.03
SEMA3B-212ENST00000616701 IGKV2-30P06310 120 aa8.59□□□□□ -1.03
SEMA3B-212ENST00000616701 Q8N1X5 172 aa8.59□□□□□ -1.03
SEMA3B-212ENST00000616701 A8MUU9 505 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms