RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 LINC00313P59037 77 aa6.66□□□□□ -1.34
FAM3A-221ENST00000612856 C8orf87E5RJ46 101 aa6.66□□□□□ -1.34
FAM3A-221ENST00000612856 SPRR4Q96PI1 79 aa6.66□□□□□ -1.34
FAM3A-221ENST00000612856 SPANXA2-OT1Q8N9U9 137 aa6.65□□□□□ -1.35
FAM3A-221ENST00000612856 H3BPC8 53 aa6.64□□□□□ -1.35
FAM3A-221ENST00000612856 A8MWP4 228 aa6.64□□□□□ -1.35
FAM3A-221ENST00000612856 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
FAM3A-221ENST00000612856 Q5VSD8 79 aa6.63□□□□□ -1.35
FAM3A-221ENST00000612856 Q6ZR54 194 aa6.62□□□□□ -1.35
FAM3A-221ENST00000612856 A6NN06 94 aa6.62□□□□□ -1.35
FAM3A-221ENST00000612856 A0A1B0GU69 56 aa6.61□□□□□ -1.35
FAM3A-221ENST00000612856 HUWE1Q7Z6Z7 4374 aaKnown RBP6.61□□□□□ -1.35
FAM3A-221ENST00000612856 IGLV7-46A0A075B6I9 117 aa6.59□□□□□ -1.36
FAM3A-221ENST00000612856 LINC01554Q52M75 96 aa6.59□□□□□ -1.36
FAM3A-221ENST00000612856 LYSTQ99698 3801 aa6.59□□□□□ -1.36
FAM3A-221ENST00000612856 KRTAP7-1Q8IUC3 87 aa6.58□□□□□ -1.36
FAM3A-221ENST00000612856 MEGF8Q7Z7M0 2845 aa6.58□□□□□ -1.36
FAM3A-221ENST00000612856 CMYA5Q8N3K9 4069 aa6.57□□□□□ -1.36
FAM3A-221ENST00000612856 KRTAP21-3Q3LHN1 58 aa6.56□□□□□ -1.36
FAM3A-221ENST00000612856 KRTAP11-1Q8IUC1 163 aa6.56□□□□□ -1.36
FAM3A-221ENST00000612856 LINC01558Q9Y6Z2 57 aa6.56□□□□□ -1.36
FAM3A-221ENST00000612856 PLAC8Q9NZF1 115 aa6.55□□□□□ -1.36
FAM3A-221ENST00000612856 HRES1P13985 223 aa6.55□□□□□ -1.36
FAM3A-221ENST00000612856 COX6B2Q6YFQ2 88 aa6.55□□□□□ -1.36
FAM3A-221ENST00000612856 PLA2G2DQ9UNK4 145 aa6.55□□□□□ -1.36
FAM3A-221ENST00000612856 DNAH10Q8IVF4 4471 aa6.55□□□□□ -1.36
FAM3A-221ENST00000612856 SSBP3-AS1Q7Z2R9 100 aa6.55□□□□□ -1.36
FAM3A-221ENST00000612856 TP53AIP1Q9HCN2 124 aa6.54□□□□□ -1.36
FAM3A-221ENST00000612856 Q6ZRN7 208 aaPredicted RBP6.53□□□□□ -1.36
FAM3A-221ENST00000612856 ACYP2P14621 99 aa6.52□□□□□ -1.37
FAM3A-221ENST00000612856 C8orf17Q9NRJ1 99 aa6.51□□□□□ -1.37
FAM3A-221ENST00000612856 DNHD1Q96M86 4753 aa6.51□□□□□ -1.37
FAM3A-221ENST00000612856 KRTAP29-1A8MX34 341 aaPredicted RBP6.51□□□□□ -1.37
FAM3A-221ENST00000612856 MMP24-AS1A0A0U1RRL7 71 aa6.5□□□□□ -1.37
FAM3A-221ENST00000612856 MIR22HGQ0VDD5 57 aa6.5□□□□□ -1.37
FAM3A-221ENST00000612856 CSAG1Q6PB30 78 aa6.5□□□□□ -1.37
FAM3A-221ENST00000612856 SPRR1AP35321 89 aa6.49□□□□□ -1.37
FAM3A-221ENST00000612856 MRPL34Q9BQ48 92 aaKnown RBP6.48□□□□□ -1.37
FAM3A-221ENST00000612856 KRTAP4-16G5E9R7 235 aaPredicted RBP6.48□□□□□ -1.37
FAM3A-221ENST00000612856 A0A087X002 238 aa6.48□□□□□ -1.37
FAM3A-221ENST00000612856 IGLV5-37A0A075B6J1 123 aa6.47□□□□□ -1.37
FAM3A-221ENST00000612856 DNAH9Q9NYC9 4486 aa6.47□□□□□ -1.37
FAM3A-221ENST00000612856 UQCR11O14957 56 aa6.46□□□□□ -1.38
FAM3A-221ENST00000612856 LINC00472Q9H8W2 130 aa6.46□□□□□ -1.38
FAM3A-221ENST00000612856 PLECQ15149 4684 aaKnown RBP6.46□□□□□ -1.38
FAM3A-221ENST00000612856 A0A1B0GVX0 72 aa6.42□□□□□ -1.38
FAM3A-221ENST00000612856 PRKDCP78527 4128 aaKnown RBP6.42□□□□□ -1.38
FAM3A-221ENST00000612856 Q8N1X5 172 aa6.4□□□□□ -1.39
FAM3A-221ENST00000612856 CRIPTQ9P021 101 aa6.39□□□□□ -1.39
FAM3A-221ENST00000612856 DNAH7Q8WXX0 4024 aa6.39□□□□□ -1.39
FAM3A-221ENST00000612856 DNAH3Q8TD57 4116 aa6.39□□□□□ -1.39
FAM3A-221ENST00000612856 NOTCH2NLQ7Z3S9 236 aa6.38□□□□□ -1.39
FAM3A-221ENST00000612856 STARD9Q9P2P6 4700 aa6.37□□□□□ -1.39
FAM3A-221ENST00000612856 Q6ZSA8 131 aa6.33□□□□□ -1.4
FAM3A-221ENST00000612856 Q5W150 140 aa6.32□□□□□ -1.4
FAM3A-221ENST00000612856 M0R2T5 61 aa6.32□□□□□ -1.4
FAM3A-221ENST00000612856 KMT2AQ03164 3969 aa6.31□□□□□ -1.4
FAM3A-221ENST00000612856 K7ERS5 55 aa6.28□□□□□ -1.4
FAM3A-221ENST00000612856 SPINT4Q6UDR6 99 aa6.25□□□□□ -1.41
FAM3A-221ENST00000612856 DNAH1Q9P2D7 4330 aa6.24□□□□□ -1.41
FAM3A-221ENST00000612856 KRTAP13-2Q52LG2 175 aa6.23□□□□□ -1.41
FAM3A-221ENST00000612856 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
FAM3A-221ENST00000612856 SPRR1BP22528 89 aa6.22□□□□□ -1.41
FAM3A-221ENST00000612856 KRTAP13-1Q8IUC0 172 aa6.18□□□□□ -1.42
FAM3A-221ENST00000612856 DMAC1Q96GE9 116 aa6.17□□□□□ -1.42
FAM3A-221ENST00000612856 DNAH11Q96DT5 4516 aa6.17□□□□□ -1.42
FAM3A-221ENST00000612856 VPS13DQ5THJ4 4388 aa6.15□□□□□ -1.43
FAM3A-221ENST00000612856 FRAS1Q86XX4 4008 aa6.12□□□□□ -1.43
FAM3A-221ENST00000612856 DNAH2Q9P225 4427 aa6.12□□□□□ -1.43
FAM3A-221ENST00000612856 A0A0D9SG42 100 aa6.12□□□□□ -1.43
FAM3A-221ENST00000612856 LINC00483Q53H64 154 aa6.11□□□□□ -1.43
FAM3A-221ENST00000612856 ROMO1P60602 79 aa6.09□□□□□ -1.43
FAM3A-221ENST00000612856 ASB16-AS1Q495Z4 193 aa6.08□□□□□ -1.44
FAM3A-221ENST00000612856 DNAH6Q9C0G6 4158 aa6.08□□□□□ -1.44
FAM3A-221ENST00000612856 A0A1B0GU33 70 aa6.08□□□□□ -1.44
FAM3A-221ENST00000612856 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
FAM3A-221ENST00000612856 HYDINQ4G0P3 5121 aa6.06□□□□□ -1.44
FAM3A-221ENST00000612856 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
FAM3A-221ENST00000612856 HECTD4Q9Y4D8 3996 aa6.04□□□□□ -1.44
FAM3A-221ENST00000612856 DNAH17Q9UFH2 4485 aa6.04□□□□□ -1.44
FAM3A-221ENST00000612856 KRTAP1-4P0C5Y4 121 aa6.03□□□□□ -1.44
FAM3A-221ENST00000612856 DYNC2H1Q8NCM8 4307 aaKnown RBP6.01□□□□□ -1.45
FAM3A-221ENST00000612856 DNAH8Q96JB1 4490 aa6.01□□□□□ -1.45
FAM3A-221ENST00000612856 A8MUU9 505 aa6□□□□□ -1.45
FAM3A-221ENST00000612856 LRP1BQ9NZR2 4599 aa6□□□□□ -1.45
FAM3A-221ENST00000612856 A0A1B0GVY2 172 aa5.97□□□□□ -1.45
FAM3A-221ENST00000612856 NDUFAF8A1L188 74 aa5.97□□□□□ -1.45
FAM3A-221ENST00000612856 DNAH5Q8TE73 4624 aa5.96□□□□□ -1.46
FAM3A-221ENST00000612856 FAT1Q14517 4588 aa5.95□□□□□ -1.46
FAM3A-221ENST00000612856 H0YAA0 97 aa5.92□□□□□ -1.46
FAM3A-221ENST00000612856 PKHD1P08F94 4074 aa5.92□□□□□ -1.46
FAM3A-221ENST00000612856 KRTAP13-3Q3SY46 172 aa5.89□□□□□ -1.47
FAM3A-221ENST00000612856 H1FX-AS1Q4G0G2 97 aa5.89□□□□□ -1.47
FAM3A-221ENST00000612856 KRTAP4-5Q9BYR2 181 aa5.89□□□□□ -1.47
FAM3A-221ENST00000612856 S4R3F8 94 aa5.87□□□□□ -1.47
FAM3A-221ENST00000612856 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
FAM3A-221ENST00000612856 DYNC1H1Q14204 4646 aaKnown RBP5.85□□□□□ -1.47
FAM3A-221ENST00000612856 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
FAM3A-221ENST00000612856 SACSQ9NZJ4 4579 aa5.85□□□□□ -1.47
FAM3A-221ENST00000612856 KMT2CQ8NEZ4 4911 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms