RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 DSCR10P59022 87 aa6.03□□□□□ -1.44
CTCFL-222ENST00000609232 C7orf65Q6ZTY9 151 aa6.03□□□□□ -1.44
CTCFL-222ENST00000609232 SPAG11AQ6PDA7 123 aa6.02□□□□□ -1.45
CTCFL-222ENST00000609232 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
CTCFL-222ENST00000609232 FRAS1Q86XX4 4008 aa6.02□□□□□ -1.45
CTCFL-222ENST00000609232 A0A1B0GW54 56 aa6.01□□□□□ -1.45
CTCFL-222ENST00000609232 LINC01554Q52M75 96 aa6.01□□□□□ -1.45
CTCFL-222ENST00000609232 ZCCHC13Q8WW36 166 aaKnown RBP6.01□□□□□ -1.45
CTCFL-222ENST00000609232 ATP11AUNQ6ZP68 121 aa6.01□□□□□ -1.45
CTCFL-222ENST00000609232 H0Y9P7 68 aa6□□□□□ -1.45
CTCFL-222ENST00000609232 LIMD2Q9BT23 127 aa6□□□□□ -1.45
CTCFL-222ENST00000609232 KRTAP10-1P60331 282 aa6□□□□□ -1.45
CTCFL-222ENST00000609232 LCE6AA0A183 80 aa5.99□□□□□ -1.45
CTCFL-222ENST00000609232 PLA2G1BP04054 148 aaKnown RBP5.99□□□□□ -1.45
CTCFL-222ENST00000609232 FAT1Q14517 4588 aa5.98□□□□□ -1.45
CTCFL-222ENST00000609232 DNAH8Q96JB1 4490 aa5.97□□□□□ -1.45
CTCFL-222ENST00000609232 DNAH6Q9C0G6 4158 aa5.97□□□□□ -1.45
CTCFL-222ENST00000609232 CASC2Q6XLA1 102 aa5.96□□□□□ -1.46
CTCFL-222ENST00000609232 PLAC8Q9NZF1 115 aa5.96□□□□□ -1.46
CTCFL-222ENST00000609232 Q8N9P0 234 aaPredicted RBP5.96□□□□□ -1.46
CTCFL-222ENST00000609232 SPRR4Q96PI1 79 aa5.96□□□□□ -1.46
CTCFL-222ENST00000609232 A6NN06 94 aa5.95□□□□□ -1.46
CTCFL-222ENST00000609232 DNAH2Q9P225 4427 aa5.94□□□□□ -1.46
CTCFL-222ENST00000609232 C9orf92A6NGG3 77 aa5.94□□□□□ -1.46
CTCFL-222ENST00000609232 HYDINQ4G0P3 5121 aa5.94□□□□□ -1.46
CTCFL-222ENST00000609232 MYCBP2O75592 4640 aa5.92□□□□□ -1.46
CTCFL-222ENST00000609232 COA5Q86WW8 74 aa5.92□□□□□ -1.46
CTCFL-222ENST00000609232 SPINK7P58062 85 aa5.91□□□□□ -1.46
CTCFL-222ENST00000609232 A0A087X002 238 aa5.91□□□□□ -1.46
CTCFL-222ENST00000609232 ZNF861PO60384 105 aa5.91□□□□□ -1.46
CTCFL-222ENST00000609232 NOTCH2NLQ7Z3S9 236 aa5.91□□□□□ -1.46
CTCFL-222ENST00000609232 SPINK1P00995 79 aa5.9□□□□□ -1.46
CTCFL-222ENST00000609232 SPANXA2-OT1Q8N9U9 137 aa5.9□□□□□ -1.46
CTCFL-222ENST00000609232 KMT2CQ8NEZ4 4911 aaKnown RBP5.9□□□□□ -1.47
CTCFL-222ENST00000609232 PKHD1P08F94 4074 aa5.9□□□□□ -1.47
CTCFL-222ENST00000609232 IGKV2D-30A0A075B6S6 120 aa5.89□□□□□ -1.47
CTCFL-222ENST00000609232 H3BPC8 53 aa5.89□□□□□ -1.47
CTCFL-222ENST00000609232 IGKV2-30P06310 120 aa5.89□□□□□ -1.47
CTCFL-222ENST00000609232 IGLV7-43P04211 117 aa5.88□□□□□ -1.47
CTCFL-222ENST00000609232 DNAH17Q9UFH2 4485 aa5.88□□□□□ -1.47
CTCFL-222ENST00000609232 LOC101927531A0A1B0GV80 90 aa5.87□□□□□ -1.47
CTCFL-222ENST00000609232 KRTAP13-1Q8IUC0 172 aa5.87□□□□□ -1.47
CTCFL-222ENST00000609232 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
CTCFL-222ENST00000609232 TYMSOSQ8TAI1 123 aa5.86□□□□□ -1.47
CTCFL-222ENST00000609232 FAT3Q8TDW7 4589 aa5.86□□□□□ -1.47
CTCFL-222ENST00000609232 SPRR1BP22528 89 aa5.85□□□□□ -1.47
CTCFL-222ENST00000609232 LRP1BQ9NZR2 4599 aa5.85□□□□□ -1.47
CTCFL-222ENST00000609232 ALMS1Q8TCU4 4167 aa5.84□□□□□ -1.48
CTCFL-222ENST00000609232 A8MWP4 228 aa5.84□□□□□ -1.48
CTCFL-222ENST00000609232 IGLV8-61A0A075B6I0 122 aa5.83□□□□□ -1.48
CTCFL-222ENST00000609232 KRTAP29-1A8MX34 341 aaPredicted RBP5.83□□□□□ -1.48
CTCFL-222ENST00000609232 CSAG1Q6PB30 78 aa5.81□□□□□ -1.48
CTCFL-222ENST00000609232 Q6ZSA8 131 aa5.81□□□□□ -1.48
CTCFL-222ENST00000609232 DNAH5Q8TE73 4624 aa5.81□□□□□ -1.48
CTCFL-222ENST00000609232 HECTD4Q9Y4D8 3996 aa5.81□□□□□ -1.48
CTCFL-222ENST00000609232 IGLV7-46A0A075B6I9 117 aa5.8□□□□□ -1.48
CTCFL-222ENST00000609232 Q96NJ1 140 aa5.8□□□□□ -1.48
CTCFL-222ENST00000609232 SACSQ9NZJ4 4579 aa5.79□□□□□ -1.48
CTCFL-222ENST00000609232 LINC00483Q53H64 154 aa5.78□□□□□ -1.48
CTCFL-222ENST00000609232 LINC01558Q9Y6Z2 57 aa5.77□□□□□ -1.49
CTCFL-222ENST00000609232 VPS13BQ7Z7G8 4022 aa5.76□□□□□ -1.49
CTCFL-222ENST00000609232 KIAA1109Q2LD37 5005 aa5.76□□□□□ -1.49
CTCFL-222ENST00000609232 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
CTCFL-222ENST00000609232 MMP24-AS1A0A0U1RRL7 71 aa5.75□□□□□ -1.49
CTCFL-222ENST00000609232 LINC00472Q9H8W2 130 aa5.75□□□□□ -1.49
CTCFL-222ENST00000609232 TP53AIP1Q9HCN2 124 aa5.74□□□□□ -1.49
CTCFL-222ENST00000609232 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
CTCFL-222ENST00000609232 FAT2Q9NYQ8 4349 aa5.73□□□□□ -1.49
CTCFL-222ENST00000609232 C8orf17Q9NRJ1 99 aa5.72□□□□□ -1.49
CTCFL-222ENST00000609232 HRES1P13985 223 aa5.72□□□□□ -1.49
CTCFL-222ENST00000609232 Q8N1X5 172 aa5.72□□□□□ -1.49
CTCFL-222ENST00000609232 A0A1B0GVY2 172 aa5.71□□□□□ -1.5
CTCFL-222ENST00000609232 SSBP3-AS1Q7Z2R9 100 aa5.71□□□□□ -1.5
CTCFL-222ENST00000609232 CRIPTQ9P021 101 aa5.7□□□□□ -1.5
CTCFL-222ENST00000609232 KRTAP13-2Q52LG2 175 aa5.7□□□□□ -1.5
CTCFL-222ENST00000609232 A0A1B0GVX0 72 aa5.68□□□□□ -1.5
CTCFL-222ENST00000609232 PKD1P98161 4303 aa5.68□□□□□ -1.5
CTCFL-222ENST00000609232 DYNC1H1Q14204 4646 aaKnown RBP5.67□□□□□ -1.5
CTCFL-222ENST00000609232 LINC00304Q8N9R0 145 aa5.67□□□□□ -1.5
CTCFL-222ENST00000609232 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
CTCFL-222ENST00000609232 Q5W150 140 aa5.67□□□□□ -1.5
CTCFL-222ENST00000609232 KRTAP16-1A8MUX0 517 aa5.66□□□□□ -1.5
CTCFL-222ENST00000609232 MRPL34Q9BQ48 92 aaKnown RBP5.66□□□□□ -1.5
CTCFL-222ENST00000609232 RYR2Q92736 4967 aa5.65□□□□□ -1.5
CTCFL-222ENST00000609232 KRTAP1-4P0C5Y4 121 aa5.64□□□□□ -1.51
CTCFL-222ENST00000609232 A0A1B0GU69 56 aa5.63□□□□□ -1.51
CTCFL-222ENST00000609232 ACYP2P14621 99 aa5.63□□□□□ -1.51
CTCFL-222ENST00000609232 RYR3Q15413 4870 aa5.63□□□□□ -1.51
CTCFL-222ENST00000609232 RYR1P21817 5038 aa5.63□□□□□ -1.51
CTCFL-222ENST00000609232 Q5VSD8 79 aa5.61□□□□□ -1.51
CTCFL-222ENST00000609232 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
CTCFL-222ENST00000609232 APOBP04114 4563 aaKnown RBP5.59□□□□□ -1.51
CTCFL-222ENST00000609232 ROMO1P60602 79 aa5.57□□□□□ -1.52
CTCFL-222ENST00000609232 EPPK1P58107 5090 aaKnown RBP5.57□□□□□ -1.52
CTCFL-222ENST00000609232 UQCR11O14957 56 aa5.54□□□□□ -1.52
CTCFL-222ENST00000609232 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
CTCFL-222ENST00000609232 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
CTCFL-222ENST00000609232 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
CTCFL-222ENST00000609232 SPATA8Q6RVD6 105 aa5.48□□□□□ -1.53
CTCFL-222ENST00000609232 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms