RNA–Protein interactions for RNA: ENST00000606570.1

SNX5-218, Transcript of sorting nexin 5, humanhuman

Gene SNX5, Length 3,931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-218ENST00000606570 TRRAPQ9Y4A5 3859 aa4.2□□□□□ -1.74
SNX5-218ENST00000606570 WWC2-AS2Q96NR7 200 aa4.19□□□□□ -1.74
SNX5-218ENST00000606570 KRTAP29-1A8MX34 341 aaPredicted RBP4.18□□□□□ -1.74
SNX5-218ENST00000606570 TENM1Q9UKZ4 2725 aa4.18□□□□□ -1.74
SNX5-218ENST00000606570 ACYP2P14621 99 aa4.17□□□□□ -1.74
SNX5-218ENST00000606570 A0A087WTM6 91 aa4.17□□□□□ -1.74
SNX5-218ENST00000606570 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
SNX5-218ENST00000606570 COL6A5A8TX70 2615 aa4.16□□□□□ -1.74
SNX5-218ENST00000606570 H3BNG1 76 aa4.16□□□□□ -1.74
SNX5-218ENST00000606570 UBE2DNLQ8IWF7 75 aa4.16□□□□□ -1.74
SNX5-218ENST00000606570 STAB1Q9NY15 2570 aa4.15□□□□□ -1.74
SNX5-218ENST00000606570 KRTAP1-1Q07627 177 aa4.15□□□□□ -1.75
SNX5-218ENST00000606570 LINC00304Q8N9R0 145 aa4.15□□□□□ -1.75
SNX5-218ENST00000606570 A0A1B0GVX0 72 aa4.14□□□□□ -1.75
SNX5-218ENST00000606570 SPRR1AP35321 89 aa4.14□□□□□ -1.75
SNX5-218ENST00000606570 ANK2Q01484 3957 aa4.13□□□□□ -1.75
SNX5-218ENST00000606570 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
SNX5-218ENST00000606570 NBEAL1Q6ZS30 2694 aa4.12□□□□□ -1.75
SNX5-218ENST00000606570 MGAM2Q2M2H8 2515 aa4.12□□□□□ -1.75
SNX5-218ENST00000606570 SPINK6Q6UWN8 80 aa4.12□□□□□ -1.75
SNX5-218ENST00000606570 Q96NJ1 140 aa4.12□□□□□ -1.75
SNX5-218ENST00000606570 DNAH3Q8TD57 4116 aa4.11□□□□□ -1.75
SNX5-218ENST00000606570 IGLV7-43P04211 117 aa4.11□□□□□ -1.75
SNX5-218ENST00000606570 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
SNX5-218ENST00000606570 NSD1Q96L73 2696 aaPredicted RBP4.1□□□□□ -1.75
SNX5-218ENST00000606570 PKD1L1Q8TDX9 2849 aa4.09□□□□□ -1.75
SNX5-218ENST00000606570 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.76
SNX5-218ENST00000606570 NBDYA0A0U1RRE5 68 aa4.08□□□□□ -1.76
SNX5-218ENST00000606570 LCE2CQ5TA81 110 aa4.08□□□□□ -1.76
SNX5-218ENST00000606570 KRTAP7-1Q8IUC3 87 aa4.08□□□□□ -1.76
SNX5-218ENST00000606570 TENM3Q9P273 2699 aa4.08□□□□□ -1.76
SNX5-218ENST00000606570 KRTAP11-1Q8IUC1 163 aa4.07□□□□□ -1.76
SNX5-218ENST00000606570 MMP24-AS1A0A0U1RRL7 71 aa4.07□□□□□ -1.76
SNX5-218ENST00000606570 PANO1I0J062 215 aa4.06□□□□□ -1.76
SNX5-218ENST00000606570 KRTAP10-11P60412 298 aa4.06□□□□□ -1.76
SNX5-218ENST00000606570 C14orf177Q52M58 125 aa4.06□□□□□ -1.76
SNX5-218ENST00000606570 FBN1P35555 2871 aaKnown RBP4.05□□□□□ -1.76
SNX5-218ENST00000606570 CMYA5Q8N3K9 4069 aa4.05□□□□□ -1.76
SNX5-218ENST00000606570 MRPL34Q9BQ48 92 aaKnown RBP4.04□□□□□ -1.76
SNX5-218ENST00000606570 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
SNX5-218ENST00000606570 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
SNX5-218ENST00000606570 ANAPC11Q9NYG5 84 aa4.01□□□□□ -1.77
SNX5-218ENST00000606570 LCE2BO14633 110 aa4□□□□□ -1.77
SNX5-218ENST00000606570 STAB2Q8WWQ8 2551 aa4□□□□□ -1.77
SNX5-218ENST00000606570 SRRM2Q9UQ35 2752 aaKnown RBP4□□□□□ -1.77
SNX5-218ENST00000606570 K7EIL1 84 aa3.99□□□□□ -1.77
SNX5-218ENST00000606570 KRTAP24-1Q3LI83 254 aa3.99□□□□□ -1.77
SNX5-218ENST00000606570 SPRR1BP22528 89 aa3.98□□□□□ -1.77
SNX5-218ENST00000606570 LYSTQ99698 3801 aa3.98□□□□□ -1.77
SNX5-218ENST00000606570 CSMD3Q7Z407 3707 aa3.97□□□□□ -1.77
SNX5-218ENST00000606570 SPINK1P00995 79 aa3.97□□□□□ -1.77
SNX5-218ENST00000606570 KRTAP1-5Q9BYS1 174 aa3.97□□□□□ -1.77
SNX5-218ENST00000606570 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
SNX5-218ENST00000606570 IGKV2-30P06310 120 aa3.95□□□□□ -1.78
SNX5-218ENST00000606570 LY6G6CO95867 125 aa3.95□□□□□ -1.78
SNX5-218ENST00000606570 H0YAA0 97 aa3.95□□□□□ -1.78
SNX5-218ENST00000606570 TPRXLQ17RH7 258 aa3.94□□□□□ -1.78
SNX5-218ENST00000606570 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
SNX5-218ENST00000606570 COL7A1Q02388 2944 aa3.91□□□□□ -1.78
SNX5-218ENST00000606570 FBN3Q75N90 2809 aa3.9□□□□□ -1.79
SNX5-218ENST00000606570 Q6ZSA8 131 aa3.9□□□□□ -1.79
SNX5-218ENST00000606570 A0A1B0GU33 70 aa3.89□□□□□ -1.79
SNX5-218ENST00000606570 TENM2Q9NT68 2774 aa3.87□□□□□ -1.79
SNX5-218ENST00000606570 DNAH7Q8WXX0 4024 aa3.87□□□□□ -1.79
SNX5-218ENST00000606570 SPACA4Q8TDM5 124 aa3.86□□□□□ -1.79
SNX5-218ENST00000606570 KRTAP13-1Q8IUC0 172 aa3.85□□□□□ -1.79
SNX5-218ENST00000606570 APLNQ9ULZ1 77 aa3.85□□□□□ -1.79
SNX5-218ENST00000606570 DMBT1Q9UGM3 2413 aaPredicted RBP3.85□□□□□ -1.79
SNX5-218ENST00000606570 DNAH10Q8IVF4 4471 aa3.84□□□□□ -1.79
SNX5-218ENST00000606570 DYNC2H1Q8NCM8 4307 aaKnown RBP3.83□□□□□ -1.8
SNX5-218ENST00000606570 Q8N1X5 172 aa3.83□□□□□ -1.8
SNX5-218ENST00000606570 HUWE1Q7Z6Z7 4374 aaKnown RBP3.83□□□□□ -1.8
SNX5-218ENST00000606570 DNAH9Q9NYC9 4486 aa3.82□□□□□ -1.8
SNX5-218ENST00000606570 H1FX-AS1Q4G0G2 97 aa3.8□□□□□ -1.8
SNX5-218ENST00000606570 TGP01266 2768 aa3.79□□□□□ -1.8
SNX5-218ENST00000606570 DNAH1Q9P2D7 4330 aa3.79□□□□□ -1.8
SNX5-218ENST00000606570 ALMS1Q8TCU4 4167 aa3.79□□□□□ -1.8
SNX5-218ENST00000606570 DNHD1Q96M86 4753 aa3.78□□□□□ -1.81
SNX5-218ENST00000606570 R4GN34 69 aa3.77□□□□□ -1.81
SNX5-218ENST00000606570 PRKDCP78527 4128 aaKnown RBP3.77□□□□□ -1.81
SNX5-218ENST00000606570 DNAH6Q9C0G6 4158 aa3.76□□□□□ -1.81
SNX5-218ENST00000606570 KRTAP13-3Q3SY46 172 aa3.75□□□□□ -1.81
SNX5-218ENST00000606570 RPL37P61927 97 aaKnown RBP3.75□□□□□ -1.81
SNX5-218ENST00000606570 Q6ZRN7 208 aaPredicted RBP3.75□□□□□ -1.81
SNX5-218ENST00000606570 PRO2289Q9P1D8 64 aa3.75□□□□□ -1.81
SNX5-218ENST00000606570 LORP23490 312 aaPredicted RBP3.74□□□□□ -1.81
SNX5-218ENST00000606570 PLECQ15149 4684 aaKnown RBP3.74□□□□□ -1.81
SNX5-218ENST00000606570 TYMSOSQ8TAI1 123 aa3.74□□□□□ -1.81
SNX5-218ENST00000606570 STARD9Q9P2P6 4700 aa3.73□□□□□ -1.81
SNX5-218ENST00000606570 PLAC4Q8WY50 150 aa3.72□□□□□ -1.81
SNX5-218ENST00000606570 KMT2AQ03164 3969 aa3.71□□□□□ -1.82
SNX5-218ENST00000606570 MEGF8Q7Z7M0 2845 aa3.7□□□□□ -1.82
SNX5-218ENST00000606570 A0A0D9SG42 100 aa3.69□□□□□ -1.82
SNX5-218ENST00000606570 C9orf92A6NGG3 77 aa3.69□□□□□ -1.82
SNX5-218ENST00000606570 KRTAP13-2Q52LG2 175 aa3.67□□□□□ -1.82
SNX5-218ENST00000606570 KRTAP3-1Q9BYR8 98 aa3.67□□□□□ -1.82
SNX5-218ENST00000606570 COX6B2Q6YFQ2 88 aa3.66□□□□□ -1.82
SNX5-218ENST00000606570 FRAS1Q86XX4 4008 aa3.65□□□□□ -1.83
SNX5-218ENST00000606570 DNAH2Q9P225 4427 aa3.64□□□□□ -1.83
SNX5-218ENST00000606570 HECTD4Q9Y4D8 3996 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms