RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 NDUFB1O75438 58 aa3.99□□□□□ -1.77
LINC00458-204ENST00000606055 CXCL6P80162 114 aa3.99□□□□□ -1.77
LINC00458-204ENST00000606055 ATP5EP2Q5VTU8 51 aa3.99□□□□□ -1.77
LINC00458-204ENST00000606055 Q6ZVQ6 151 aa3.99□□□□□ -1.77
LINC00458-204ENST00000606055 CDIP1Q9H305 208 aa3.99□□□□□ -1.77
LINC00458-204ENST00000606055 LINC00846Q9NV44 126 aa3.99□□□□□ -1.77
LINC00458-204ENST00000606055 C8orf87E5RJ46 101 aa3.98□□□□□ -1.77
LINC00458-204ENST00000606055 IGKV4-1P06312 121 aa3.98□□□□□ -1.77
LINC00458-204ENST00000606055 SIGMAR1Q99720 223 aa3.98□□□□□ -1.77
LINC00458-204ENST00000606055 A0A1B0GVX0 72 aa3.97□□□□□ -1.77
LINC00458-204ENST00000606055 K7ERU9 68 aa3.97□□□□□ -1.77
LINC00458-204ENST00000606055 BPY2O14599 106 aa3.97□□□□□ -1.77
LINC00458-204ENST00000606055 XP32Q5T750 250 aa3.96□□□□□ -1.78
LINC00458-204ENST00000606055 PRR15Q8IV56 129 aa3.96□□□□□ -1.78
LINC00458-204ENST00000606055 LINC00643Q86TS7 51 aa3.95□□□□□ -1.78
LINC00458-204ENST00000606055 DSCR10P59022 87 aa3.94□□□□□ -1.78
LINC00458-204ENST00000606055 LINC00313P59037 77 aa3.94□□□□□ -1.78
LINC00458-204ENST00000606055 IGKV3D-7A0A0C4DH55 119 aa3.93□□□□□ -1.78
LINC00458-204ENST00000606055 Q75L30 129 aa3.93□□□□□ -1.78
LINC00458-204ENST00000606055 C20orf166-AS1Q96NR2 134 aa3.93□□□□□ -1.78
LINC00458-204ENST00000606055 A8MUU9 505 aa3.91□□□□□ -1.78
LINC00458-204ENST00000606055 KRTAP16-1A8MUX0 517 aa3.91□□□□□ -1.78
LINC00458-204ENST00000606055 Q8N9P0 234 aaPredicted RBP3.91□□□□□ -1.78
LINC00458-204ENST00000606055 C8orf17Q9NRJ1 99 aa3.91□□□□□ -1.78
LINC00458-204ENST00000606055 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
LINC00458-204ENST00000606055 IGHV6-1A0A0B4J1U7 121 aa3.9□□□□□ -1.79
LINC00458-204ENST00000606055 SEC61BP60468 96 aaKnown RBP3.9□□□□□ -1.79
LINC00458-204ENST00000606055 DEFB116Q30KQ4 102 aa3.9□□□□□ -1.79
LINC00458-204ENST00000606055 IMUPQ9GZP8 106 aa3.9□□□□□ -1.79
LINC00458-204ENST00000606055 MMP24-AS1A0A0U1RRL7 71 aa3.89□□□□□ -1.79
LINC00458-204ENST00000606055 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
LINC00458-204ENST00000606055 K7EQZ3 153 aa3.89□□□□□ -1.79
LINC00458-204ENST00000606055 PCP4P48539 62 aa3.89□□□□□ -1.79
LINC00458-204ENST00000606055 RPL37P61927 97 aaKnown RBP3.89□□□□□ -1.79
LINC00458-204ENST00000606055 TMEM254Q8TBM7 123 aa3.89□□□□□ -1.79
LINC00458-204ENST00000606055 FSIP2Q5CZC0 6907 aa3.89□□□□□ -1.79
LINC00458-204ENST00000606055 A0A0U1RQV1 116 aa3.88□□□□□ -1.79
LINC00458-204ENST00000606055 hDV103S1A0JD37 113 aa3.88□□□□□ -1.79
LINC00458-204ENST00000606055 HCG22E2RYF7 251 aa3.87□□□□□ -1.79
LINC00458-204ENST00000606055 NOTCH2NLQ7Z3S9 236 aa3.86□□□□□ -1.79
LINC00458-204ENST00000606055 MRPL34Q9BQ48 92 aaKnown RBP3.86□□□□□ -1.79
LINC00458-204ENST00000606055 CASC2Q6XLA1 102 aa3.85□□□□□ -1.79
LINC00458-204ENST00000606055 ATP11AUNQ6ZP68 121 aa3.85□□□□□ -1.79
LINC00458-204ENST00000606055 TP53AIP1Q9HCN2 124 aa3.85□□□□□ -1.79
LINC00458-204ENST00000606055 Q8N9L7 120 aa3.83□□□□□ -1.8
LINC00458-204ENST00000606055 HIST1H4AP62805 103 aaKnown RBP3.81□□□□□ -1.8
LINC00458-204ENST00000606055 PCOTHQ58A44 107 aa3.81□□□□□ -1.8
LINC00458-204ENST00000606055 LCE2AQ5TA79 106 aaPredicted RBP3.81□□□□□ -1.8
LINC00458-204ENST00000606055 ZCCHC13Q8WW36 166 aaKnown RBP3.81□□□□□ -1.8
LINC00458-204ENST00000606055 CRCT1Q9UGL9 99 aa3.8□□□□□ -1.8
LINC00458-204ENST00000606055 WFDC13Q8IUB5 93 aa3.79□□□□□ -1.8
LINC00458-204ENST00000606055 SMIM20Q8N5G0 67 aa3.78□□□□□ -1.8
LINC00458-204ENST00000606055 UQCRQO14949 82 aa3.77□□□□□ -1.81
LINC00458-204ENST00000606055 MT-ATP8P03928 68 aa3.77□□□□□ -1.81
LINC00458-204ENST00000606055 A0A087WVE0 104 aa3.76□□□□□ -1.81
LINC00458-204ENST00000606055 ATOX1O00244 68 aa3.76□□□□□ -1.81
LINC00458-204ENST00000606055 KRTAP4-1Q9BYQ7 146 aa3.76□□□□□ -1.81
LINC00458-204ENST00000606055 NDUFS5O43920 106 aa3.75□□□□□ -1.81
LINC00458-204ENST00000606055 OCR1Q9BZK8 76 aa3.75□□□□□ -1.81
LINC00458-204ENST00000606055 TRAV22A0A0B4J277 110 aa3.74□□□□□ -1.81
LINC00458-204ENST00000606055 H3BPC8 53 aa3.74□□□□□ -1.81
LINC00458-204ENST00000606055 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
LINC00458-204ENST00000606055 C5orf47Q569G3 176 aa3.73□□□□□ -1.81
LINC00458-204ENST00000606055 Q5W150 140 aa3.73□□□□□ -1.81
LINC00458-204ENST00000606055 C7orf65Q6ZTY9 151 aa3.73□□□□□ -1.81
LINC00458-204ENST00000606055 LOC101927531A0A1B0GV80 90 aa3.72□□□□□ -1.81
LINC00458-204ENST00000606055 SCGB1A1P11684 91 aa3.72□□□□□ -1.81
LINC00458-204ENST00000606055 SPINK7P58062 85 aa3.72□□□□□ -1.81
LINC00458-204ENST00000606055 MPLKIPQ8TAP9 179 aa3.72□□□□□ -1.81
LINC00458-204ENST00000606055 IGKV2-30P06310 120 aa3.71□□□□□ -1.82
LINC00458-204ENST00000606055 TRAV7A0A075B6U4 112 aa3.7□□□□□ -1.82
LINC00458-204ENST00000606055 FAM236AA0A1B0GUQ0 79 aa3.7□□□□□ -1.82
LINC00458-204ENST00000606055 FAM236BA0A1B0GV22 79 aa3.7□□□□□ -1.82
LINC00458-204ENST00000606055 MP68P56378 58 aa3.7□□□□□ -1.82
LINC00458-204ENST00000606055 COX6B2Q6YFQ2 88 aa3.69□□□□□ -1.82
LINC00458-204ENST00000606055 HRES1P13985 223 aa3.68□□□□□ -1.82
LINC00458-204ENST00000606055 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
LINC00458-204ENST00000606055 H0Y9P7 68 aa3.67□□□□□ -1.82
LINC00458-204ENST00000606055 CYP4F30PQ9H0H9 118 aa3.67□□□□□ -1.82
LINC00458-204ENST00000606055 KRTAP19-2Q3LHN2 52 aa3.66□□□□□ -1.82
LINC00458-204ENST00000606055 SERP2Q8N6R1 65 aa3.66□□□□□ -1.82
LINC00458-204ENST00000606055 C1orf64Q8NEQ6 169 aa3.65□□□□□ -1.83
LINC00458-204ENST00000606055 IGKV2D-30A0A075B6S6 120 aa3.64□□□□□ -1.83
LINC00458-204ENST00000606055 LCE2CQ5TA81 110 aa3.64□□□□□ -1.83
LINC00458-204ENST00000606055 FLGP20930 4061 aaPredicted RBP3.64□□□□□ -1.83
LINC00458-204ENST00000606055 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
LINC00458-204ENST00000606055 A8MUN3 132 aa3.62□□□□□ -1.83
LINC00458-204ENST00000606055 M0R2T5 61 aa3.62□□□□□ -1.83
LINC00458-204ENST00000606055 LINC00208Q96KT6 92 aa3.62□□□□□ -1.83
LINC00458-204ENST00000606055 FAM236DA0A1B0GTK5 79 aa3.61□□□□□ -1.83
LINC00458-204ENST00000606055 FAM236CP0DP71 79 aa3.61□□□□□ -1.83
LINC00458-204ENST00000606055 MT1HP80294 61 aa3.61□□□□□ -1.83
LINC00458-204ENST00000606055 KLKP1Q107X0 134 aa3.61□□□□□ -1.83
LINC00458-204ENST00000606055 COX7CP15954 63 aa3.6□□□□□ -1.83
LINC00458-204ENST00000606055 NDUFC1O43677 76 aa3.59□□□□□ -1.83
LINC00458-204ENST00000606055 H1FX-AS1Q4G0G2 97 aa3.59□□□□□ -1.83
LINC00458-204ENST00000606055 SPANXA2-OT1Q8N9U9 137 aa3.57□□□□□ -1.84
LINC00458-204ENST00000606055 ANAPC13Q9BS18 74 aa3.57□□□□□ -1.84
LINC00458-204ENST00000606055 C4orf26Q17RF5 130 aa3.56□□□□□ -1.84
LINC00458-204ENST00000606055 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms