RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 UNQ6190/PRO20217Q6UXQ8 127 aa2.9□□□□□ -1.94
LINC01109-201ENST00000603837 KRTAP9-8Q9BYQ0 159 aa2.9□□□□□ -1.95
LINC01109-201ENST00000603837 C15orf56Q8N910 161 aa2.89□□□□□ -1.95
LINC01109-201ENST00000603837 KRTAP25-1Q3LHN0 102 aa2.89□□□□□ -1.95
LINC01109-201ENST00000603837 ZNF861PO60384 105 aa2.88□□□□□ -1.95
LINC01109-201ENST00000603837 CAMK2N1Q7Z7J9 78 aa2.88□□□□□ -1.95
LINC01109-201ENST00000603837 IGLV10-54A0A075B6I4 117 aa2.88□□□□□ -1.95
LINC01109-201ENST00000603837 A0A1B0GU69 56 aa2.87□□□□□ -1.95
LINC01109-201ENST00000603837 GIG44P09565 113 aaPredicted RBP2.87□□□□□ -1.95
LINC01109-201ENST00000603837 RPL37AP61513 92 aaKnown RBP2.87□□□□□ -1.95
LINC01109-201ENST00000603837 UQCR11O14957 56 aa2.87□□□□□ -1.95
LINC01109-201ENST00000603837 KRTAP26-1Q6PEX3 210 aa2.87□□□□□ -1.95
LINC01109-201ENST00000603837 NOP10Q9NPE3 64 aaKnown RBP2.87□□□□□ -1.95
LINC01109-201ENST00000603837 DEFB131BA0A096LNP1 70 aa2.87□□□□□ -1.95
LINC01109-201ENST00000603837 A0A1B0GUV1 79 aa2.87□□□□□ -1.95
LINC01109-201ENST00000603837 SPINT4Q6UDR6 99 aa2.87□□□□□ -1.95
LINC01109-201ENST00000603837 TENM3Q9P273 2699 aa2.86□□□□□ -1.95
LINC01109-201ENST00000603837 PANO1I0J062 215 aa2.85□□□□□ -1.95
LINC01109-201ENST00000603837 C16orf74Q96GX8 76 aa2.85□□□□□ -1.95
LINC01109-201ENST00000603837 STAB2Q8WWQ8 2551 aa2.85□□□□□ -1.95
LINC01109-201ENST00000603837 GVQW2A0A096LPI5 108 aaPredicted RBP2.84□□□□□ -1.95
LINC01109-201ENST00000603837 PRR34Q9NV39 138 aa2.84□□□□□ -1.95
LINC01109-201ENST00000603837 C6orf48Q9UBA6 75 aa2.84□□□□□ -1.95
LINC01109-201ENST00000603837 ANGP03950 147 aaKnown RBP2.84□□□□□ -1.95
LINC01109-201ENST00000603837 A0A087WSZ3 146 aa2.84□□□□□ -1.96
LINC01109-201ENST00000603837 IGKV2-24A0A0C4DH68 120 aa2.83□□□□□ -1.96
LINC01109-201ENST00000603837 TENM2Q9NT68 2774 aa2.83□□□□□ -1.96
LINC01109-201ENST00000603837 ANK2Q01484 3957 aa2.83□□□□□ -1.96
LINC01109-201ENST00000603837 TGP01266 2768 aa2.83□□□□□ -1.96
LINC01109-201ENST00000603837 IGKV2-30P06310 120 aa2.82□□□□□ -1.96
LINC01109-201ENST00000603837 KRTAP10-3P60369 221 aa2.82□□□□□ -1.96
LINC01109-201ENST00000603837 TP53AIP1Q9HCN2 124 aa2.82□□□□□ -1.96
LINC01109-201ENST00000603837 A0A0G2JQZ4 141 aa2.82□□□□□ -1.96
LINC01109-201ENST00000603837 A0A1W2PNN7 141 aa2.82□□□□□ -1.96
LINC01109-201ENST00000603837 A0A096LPF7 62 aa2.81□□□□□ -1.96
LINC01109-201ENST00000603837 ACYP2P14621 99 aa2.81□□□□□ -1.96
LINC01109-201ENST00000603837 IGFL1Q6UW32 110 aa2.81□□□□□ -1.96
LINC01109-201ENST00000603837 MMP24-AS1A0A0U1RRL7 71 aa2.81□□□□□ -1.96
LINC01109-201ENST00000603837 Q6ZRX8 168 aa2.81□□□□□ -1.96
LINC01109-201ENST00000603837 C4orf3Q8WVX3 66 aa2.8□□□□□ -1.96
LINC01109-201ENST00000603837 TYMSOSQ8TAI1 123 aa2.8□□□□□ -1.96
LINC01109-201ENST00000603837 NUPR2A6NF83 97 aa2.79□□□□□ -1.96
LINC01109-201ENST00000603837 KRTAP24-1Q3LI83 254 aa2.79□□□□□ -1.96
LINC01109-201ENST00000603837 LINC00472Q9H8W2 130 aa2.79□□□□□ -1.96
LINC01109-201ENST00000603837 FAM168BA1KXE4 195 aa2.79□□□□□ -1.96
LINC01109-201ENST00000603837 DEFB130BP0DP73 79 aa2.77□□□□□ -1.97
LINC01109-201ENST00000603837 DEFB130AP0DP74 79 aa2.77□□□□□ -1.97
LINC01109-201ENST00000603837 LINC00304Q8N9R0 145 aa2.77□□□□□ -1.97
LINC01109-201ENST00000603837 DMAC1Q96GE9 116 aa2.77□□□□□ -1.97
LINC01109-201ENST00000603837 Q5W150 140 aa2.77□□□□□ -1.97
LINC01109-201ENST00000603837 CRIPTQ9P021 101 aa2.77□□□□□ -1.97
LINC01109-201ENST00000603837 COL7A1Q02388 2944 aa2.77□□□□□ -1.97
LINC01109-201ENST00000603837 DEFB4AO15263 64 aa2.76□□□□□ -1.97
LINC01109-201ENST00000603837 IGLV7-43P04211 117 aa2.76□□□□□ -1.97
LINC01109-201ENST00000603837 FLG2Q5D862 2391 aaPredicted RBP2.76□□□□□ -1.97
LINC01109-201ENST00000603837 A0A087WTM6 91 aa2.75□□□□□ -1.97
LINC01109-201ENST00000603837 PRO0255Q9UI72 69 aa2.75□□□□□ -1.97
LINC01109-201ENST00000603837 KRTAP10-11P60412 298 aa2.75□□□□□ -1.97
LINC01109-201ENST00000603837 DNHD1Q96M86 4753 aa2.75□□□□□ -1.97
LINC01109-201ENST00000603837 ALMS1Q8TCU4 4167 aa2.74□□□□□ -1.97
LINC01109-201ENST00000603837 CMYA5Q8N3K9 4069 aa2.74□□□□□ -1.97
LINC01109-201ENST00000603837 SPRR1AP35321 89 aa2.74□□□□□ -1.97
LINC01109-201ENST00000603837 SSBP3-AS1Q7Z2R9 100 aa2.74□□□□□ -1.97
LINC01109-201ENST00000603837 DEFB135Q30KP9 77 aa2.73□□□□□ -1.97
LINC01109-201ENST00000603837 MEGF8Q7Z7M0 2845 aa2.73□□□□□ -1.97
LINC01109-201ENST00000603837 CSMD3Q7Z407 3707 aa2.73□□□□□ -1.97
LINC01109-201ENST00000603837 NBDYA0A0U1RRE5 68 aa2.72□□□□□ -1.97
LINC01109-201ENST00000603837 MRPL34Q9BQ48 92 aaKnown RBP2.72□□□□□ -1.97
LINC01109-201ENST00000603837 Q96NJ1 140 aa2.71□□□□□ -1.98
LINC01109-201ENST00000603837 K7EIL1 84 aa2.7□□□□□ -1.98
LINC01109-201ENST00000603837 HTN3P15516 51 aa2.7□□□□□ -1.98
LINC01109-201ENST00000603837 IGKV2D-30A0A075B6S6 120 aa2.7□□□□□ -1.98
LINC01109-201ENST00000603837 A0A1B0GU33 70 aa2.7□□□□□ -1.98
LINC01109-201ENST00000603837 LELP1Q5T871 98 aa2.7□□□□□ -1.98
LINC01109-201ENST00000603837 FBN3Q75N90 2809 aa2.7□□□□□ -1.98
LINC01109-201ENST00000603837 DNAH1Q9P2D7 4330 aa2.69□□□□□ -1.98
LINC01109-201ENST00000603837 KRTAP11-1Q8IUC1 163 aa2.69□□□□□ -1.98
LINC01109-201ENST00000603837 LYSTQ99698 3801 aa2.69□□□□□ -1.98
LINC01109-201ENST00000603837 R4GN34 69 aa2.69□□□□□ -1.98
LINC01109-201ENST00000603837 PRKDCP78527 4128 aaKnown RBP2.68□□□□□ -1.98
LINC01109-201ENST00000603837 PSORS1C2Q9UIG4 136 aa2.67□□□□□ -1.98
LINC01109-201ENST00000603837 DNAH3Q8TD57 4116 aa2.67□□□□□ -1.98
LINC01109-201ENST00000603837 H0YAA0 97 aa2.67□□□□□ -1.98
LINC01109-201ENST00000603837 LY6G6CO95867 125 aa2.67□□□□□ -1.98
LINC01109-201ENST00000603837 PRLHP81277 87 aa2.67□□□□□ -1.98
LINC01109-201ENST00000603837 LCE1AQ5T7P2 110 aa2.67□□□□□ -1.98
LINC01109-201ENST00000603837 A0A096LNI7 61 aa2.66□□□□□ -1.98
LINC01109-201ENST00000603837 KRTAP13-3Q3SY46 172 aa2.66□□□□□ -1.98
LINC01109-201ENST00000603837 KRTAP7-1Q8IUC3 87 aa2.65□□□□□ -1.99
LINC01109-201ENST00000603837 Q6ZSA8 131 aa2.64□□□□□ -1.99
LINC01109-201ENST00000603837 SPACA4Q8TDM5 124 aa2.64□□□□□ -1.99
LINC01109-201ENST00000603837 SPRR1BP22528 89 aa2.63□□□□□ -1.99
LINC01109-201ENST00000603837 HUWE1Q7Z6Z7 4374 aaKnown RBP2.63□□□□□ -1.99
LINC01109-201ENST00000603837 SPART-AS1P0CW21 52 aa2.62□□□□□ -1.99
LINC01109-201ENST00000603837 TPRXLQ17RH7 258 aa2.62□□□□□ -1.99
LINC01109-201ENST00000603837 DNAH7Q8WXX0 4024 aa2.62□□□□□ -1.99
LINC01109-201ENST00000603837 SPINK1P00995 79 aa2.62□□□□□ -1.99
LINC01109-201ENST00000603837 DNAH9Q9NYC9 4486 aa2.6□□□□□ -1.99
LINC01109-201ENST00000603837 DYNC2H1Q8NCM8 4307 aaKnown RBP2.59□□□□□ -2
LINC01109-201ENST00000603837 H3BNG1 76 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms