RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ANKHD1Q8IWZ3 2542 aaKnown RBP2.91□□□□□ -1.94
SPTBN1-206ENST00000602898 UNQ6190/PRO20217Q6UXQ8 127 aa2.91□□□□□ -1.94
SPTBN1-206ENST00000602898 IGKV2-24A0A0C4DH68 120 aa2.91□□□□□ -1.94
SPTBN1-206ENST00000602898 CSMD2Q7Z408 3487 aa2.9□□□□□ -1.94
SPTBN1-206ENST00000602898 GVQW2A0A096LPI5 108 aaPredicted RBP2.9□□□□□ -1.94
SPTBN1-206ENST00000602898 ACYP2P14621 99 aa2.9□□□□□ -1.94
SPTBN1-206ENST00000602898 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.9□□□□□ -1.94
SPTBN1-206ENST00000602898 A0A0G2JQZ4 141 aa2.89□□□□□ -1.95
SPTBN1-206ENST00000602898 LINC00304Q8N9R0 145 aa2.89□□□□□ -1.95
SPTBN1-206ENST00000602898 HRNRQ86YZ3 2850 aaPredicted RBP2.89□□□□□ -1.95
SPTBN1-206ENST00000602898 ALMS1Q8TCU4 4167 aa2.89□□□□□ -1.95
SPTBN1-206ENST00000602898 A0A087WTM6 91 aa2.89□□□□□ -1.95
SPTBN1-206ENST00000602898 DEFB105AQ8NG35 78 aa2.88□□□□□ -1.95
SPTBN1-206ENST00000602898 NIPBLQ6KC79 2804 aaeCLIP2.88□□□□□ -1.95
SPTBN1-206ENST00000602898 IGKV2D-30A0A075B6S6 120 aa2.88□□□□□ -1.95
SPTBN1-206ENST00000602898 DEFB136Q30KP8 78 aa2.88□□□□□ -1.95
SPTBN1-206ENST00000602898 SMR3AQ99954 134 aa2.88□□□□□ -1.95
SPTBN1-206ENST00000602898 ANGP03950 147 aaKnown RBP2.87□□□□□ -1.95
SPTBN1-206ENST00000602898 ACANP16112 2415 aa2.87□□□□□ -1.95
SPTBN1-206ENST00000602898 CCL19Q99731 98 aa2.87□□□□□ -1.95
SPTBN1-206ENST00000602898 C6orf48Q9UBA6 75 aa2.87□□□□□ -1.95
SPTBN1-206ENST00000602898 MAP1AP78559 2803 aaPredicted RBP2.87□□□□□ -1.95
SPTBN1-206ENST00000602898 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
SPTBN1-206ENST00000602898 MMP24-AS1A0A0U1RRL7 71 aa2.86□□□□□ -1.95
SPTBN1-206ENST00000602898 DNAH1Q9P2D7 4330 aa2.86□□□□□ -1.95
SPTBN1-206ENST00000602898 NOTCH3Q9UM47 2321 aa2.86□□□□□ -1.95
SPTBN1-206ENST00000602898 NBDYA0A0U1RRE5 68 aa2.86□□□□□ -1.95
SPTBN1-206ENST00000602898 A0A096LPF7 62 aa2.85□□□□□ -1.95
SPTBN1-206ENST00000602898 JMJD1CQ15652 2540 aa2.85□□□□□ -1.95
SPTBN1-206ENST00000602898 CSPG4Q6UVK1 2322 aa2.85□□□□□ -1.95
SPTBN1-206ENST00000602898 RPL37AP61513 92 aaKnown RBP2.85□□□□□ -1.95
SPTBN1-206ENST00000602898 NSD1Q96L73 2696 aaPredicted RBP2.84□□□□□ -1.95
SPTBN1-206ENST00000602898 SPACA4Q8TDM5 124 aa2.84□□□□□ -1.95
SPTBN1-206ENST00000602898 CUBNO60494 3623 aa2.84□□□□□ -1.95
SPTBN1-206ENST00000602898 FLNAP21333 2647 aaKnown RBP2.83□□□□□ -1.96
SPTBN1-206ENST00000602898 VPS13CQ709C8 3753 aa2.83□□□□□ -1.96
SPTBN1-206ENST00000602898 DEFB130BP0DP73 79 aa2.83□□□□□ -1.96
SPTBN1-206ENST00000602898 DEFB130AP0DP74 79 aa2.83□□□□□ -1.96
SPTBN1-206ENST00000602898 Q6ZRX8 168 aa2.83□□□□□ -1.96
SPTBN1-206ENST00000602898 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
SPTBN1-206ENST00000602898 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
SPTBN1-206ENST00000602898 IGFL1Q6UW32 110 aa2.82□□□□□ -1.96
SPTBN1-206ENST00000602898 Q96NJ1 140 aa2.82□□□□□ -1.96
SPTBN1-206ENST00000602898 RYR3Q15413 4870 aa2.82□□□□□ -1.96
SPTBN1-206ENST00000602898 COL6A5A8TX70 2615 aa2.82□□□□□ -1.96
SPTBN1-206ENST00000602898 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
SPTBN1-206ENST00000602898 PRO0255Q9UI72 69 aa2.82□□□□□ -1.96
SPTBN1-206ENST00000602898 NBEAL1Q6ZS30 2694 aa2.81□□□□□ -1.96
SPTBN1-206ENST00000602898 STAB1Q9NY15 2570 aa2.81□□□□□ -1.96
SPTBN1-206ENST00000602898 C4orf3Q8WVX3 66 aa2.81□□□□□ -1.96
SPTBN1-206ENST00000602898 HIVEP2P31629 2446 aa2.81□□□□□ -1.96
SPTBN1-206ENST00000602898 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
SPTBN1-206ENST00000602898 KRTAP7-1Q8IUC3 87 aa2.81□□□□□ -1.96
SPTBN1-206ENST00000602898 ZNF469Q96JG9 3925 aaPredicted RBP2.81□□□□□ -1.96
SPTBN1-206ENST00000602898 ANK3Q12955 4377 aaKnown RBP2.8□□□□□ -1.96
SPTBN1-206ENST00000602898 SSBP3-AS1Q7Z2R9 100 aa2.8□□□□□ -1.96
SPTBN1-206ENST00000602898 ATRQ13535 2644 aa2.8□□□□□ -1.96
SPTBN1-206ENST00000602898 A0A1W2PNN7 141 aa2.79□□□□□ -1.96
SPTBN1-206ENST00000602898 HERC2O95714 4834 aa2.79□□□□□ -1.96
SPTBN1-206ENST00000602898 SPRR1AP35321 89 aa2.79□□□□□ -1.96
SPTBN1-206ENST00000602898 TLN2Q9Y4G6 2542 aa2.79□□□□□ -1.96
SPTBN1-206ENST00000602898 LY6G6CO95867 125 aa2.79□□□□□ -1.96
SPTBN1-206ENST00000602898 ANAPC11Q9NYG5 84 aa2.78□□□□□ -1.96
SPTBN1-206ENST00000602898 FLG2Q5D862 2391 aaPredicted RBP2.78□□□□□ -1.97
SPTBN1-206ENST00000602898 MAPK1IP1LQ8NDC0 245 aa2.77□□□□□ -1.97
SPTBN1-206ENST00000602898 LELP1Q5T871 98 aa2.76□□□□□ -1.97
SPTBN1-206ENST00000602898 SONP18583 2426 aaKnown RBP2.76□□□□□ -1.97
SPTBN1-206ENST00000602898 H0YAA0 97 aa2.76□□□□□ -1.97
SPTBN1-206ENST00000602898 KRTAP10-8P60410 259 aa2.76□□□□□ -1.97
SPTBN1-206ENST00000602898 PSORS1C2Q9UIG4 136 aa2.76□□□□□ -1.97
SPTBN1-206ENST00000602898 MXRA5Q9NR99 2828 aa2.76□□□□□ -1.97
SPTBN1-206ENST00000602898 MRPL34Q9BQ48 92 aaKnown RBP2.75□□□□□ -1.97
SPTBN1-206ENST00000602898 KRTAP13-3Q3SY46 172 aa2.75□□□□□ -1.97
SPTBN1-206ENST00000602898 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
SPTBN1-206ENST00000602898 ZANQ9Y493 2812 aa2.73□□□□□ -1.97
SPTBN1-206ENST00000602898 MEGF8Q7Z7M0 2845 aa2.73□□□□□ -1.97
SPTBN1-206ENST00000602898 DEFB4AO15263 64 aa2.72□□□□□ -1.97
SPTBN1-206ENST00000602898 NBEAL2Q6ZNJ1 2754 aa2.72□□□□□ -1.97
SPTBN1-206ENST00000602898 LCE1AQ5T7P2 110 aa2.72□□□□□ -1.97
SPTBN1-206ENST00000602898 Q6ZSA8 131 aa2.72□□□□□ -1.97
SPTBN1-206ENST00000602898 HTN3P15516 51 aa2.7□□□□□ -1.98
SPTBN1-206ENST00000602898 RYR2Q92736 4967 aa2.7□□□□□ -1.98
SPTBN1-206ENST00000602898 DNAH6Q9C0G6 4158 aa2.7□□□□□ -1.98
SPTBN1-206ENST00000602898 SPRR1BP22528 89 aa2.69□□□□□ -1.98
SPTBN1-206ENST00000602898 KRTAP10-11P60412 298 aa2.69□□□□□ -1.98
SPTBN1-206ENST00000602898 K7EIL1 84 aa2.68□□□□□ -1.98
SPTBN1-206ENST00000602898 PRLHP81277 87 aa2.68□□□□□ -1.98
SPTBN1-206ENST00000602898 CMYA5Q8N3K9 4069 aa2.67□□□□□ -1.98
SPTBN1-206ENST00000602898 DEFB135Q30KP9 77 aa2.67□□□□□ -1.98
SPTBN1-206ENST00000602898 PCLOQ9Y6V0 5065 aa2.67□□□□□ -1.98
SPTBN1-206ENST00000602898 MGAM2Q2M2H8 2515 aa2.67□□□□□ -1.98
SPTBN1-206ENST00000602898 TGP01266 2768 aa2.66□□□□□ -1.98
SPTBN1-206ENST00000602898 TENM2Q9NT68 2774 aa2.66□□□□□ -1.98
SPTBN1-206ENST00000602898 H1FX-AS1Q4G0G2 97 aa2.66□□□□□ -1.98
SPTBN1-206ENST00000602898 SPART-AS1P0CW21 52 aa2.65□□□□□ -1.98
SPTBN1-206ENST00000602898 A0A096LNI7 61 aa2.64□□□□□ -1.99
SPTBN1-206ENST00000602898 PRKDCP78527 4128 aaKnown RBP2.64□□□□□ -1.99
SPTBN1-206ENST00000602898 TENM1Q9UKZ4 2725 aa2.63□□□□□ -1.99
SPTBN1-206ENST00000602898 CSMD3Q7Z407 3707 aa2.63□□□□□ -1.99
SPTBN1-206ENST00000602898 LINC01556Q5JQF7 62 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms