RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 TRAV7A0A075B6U4 112 aa8.27□□□□□ -1.09
NEAT1-203ENST00000601801 IGFL1Q6UW32 110 aa8.25□□□□□ -1.09
NEAT1-203ENST00000601801 IGLV7-46A0A075B6I9 117 aa8.22□□□□□ -1.09
NEAT1-203ENST00000601801 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
NEAT1-203ENST00000601801 IGKV4-1P06312 121 aa8.21□□□□□ -1.1
NEAT1-203ENST00000601801 SPAG11AQ6PDA7 123 aa8.21□□□□□ -1.1
NEAT1-203ENST00000601801 LINC00483Q53H64 154 aa8.19□□□□□ -1.1
NEAT1-203ENST00000601801 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
NEAT1-203ENST00000601801 A0A087WSZ3 146 aa8.16□□□□□ -1.1
NEAT1-203ENST00000601801 TMEM258P61165 79 aa8.16□□□□□ -1.1
NEAT1-203ENST00000601801 J3KT08 172 aa8.15□□□□□ -1.1
NEAT1-203ENST00000601801 SS18L2Q9UHA2 77 aa8.15□□□□□ -1.1
NEAT1-203ENST00000601801 NDUFC1O43677 76 aa8.14□□□□□ -1.11
NEAT1-203ENST00000601801 FP248Q71RG6 208 aaPredicted RBP8.13□□□□□ -1.11
NEAT1-203ENST00000601801 DSCR10P59022 87 aa8.12□□□□□ -1.11
NEAT1-203ENST00000601801 Q8N9L7 120 aa8.12□□□□□ -1.11
NEAT1-203ENST00000601801 FSIP2Q5CZC0 6907 aa8.12□□□□□ -1.11
NEAT1-203ENST00000601801 SPINK1P00995 79 aa8.11□□□□□ -1.11
NEAT1-203ENST00000601801 KLKP1Q107X0 134 aa8.11□□□□□ -1.11
NEAT1-203ENST00000601801 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
NEAT1-203ENST00000601801 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
NEAT1-203ENST00000601801 HCG22E2RYF7 251 aa8.09□□□□□ -1.11
NEAT1-203ENST00000601801 NDUFB1O75438 58 aa8.08□□□□□ -1.12
NEAT1-203ENST00000601801 OCR1Q9BZK8 76 aa8.08□□□□□ -1.12
NEAT1-203ENST00000601801 CRCT1Q9UGL9 99 aa8.08□□□□□ -1.12
NEAT1-203ENST00000601801 IGLV9-49A0A0B4J1Y8 123 aa8.07□□□□□ -1.12
NEAT1-203ENST00000601801 K7EQZ3 153 aa8.07□□□□□ -1.12
NEAT1-203ENST00000601801 MOBPQ13875 183 aa8.07□□□□□ -1.12
NEAT1-203ENST00000601801 A8MWP4 228 aa8.06□□□□□ -1.12
NEAT1-203ENST00000601801 SSBP3-AS1Q7Z2R9 100 aa8.06□□□□□ -1.12
NEAT1-203ENST00000601801 LINC00472Q9H8W2 130 aa8.06□□□□□ -1.12
NEAT1-203ENST00000601801 KRTAP13-3Q3SY46 172 aa8.05□□□□□ -1.12
NEAT1-203ENST00000601801 A0A0G2JQZ4 141 aa8.04□□□□□ -1.12
NEAT1-203ENST00000601801 ATP5EP56381 51 aaPredicted RBP8.04□□□□□ -1.12
NEAT1-203ENST00000601801 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
NEAT1-203ENST00000601801 RPS28P62857 69 aaKnown RBP8.04□□□□□ -1.12
NEAT1-203ENST00000601801 PRR15Q8IV56 129 aa8.04□□□□□ -1.12
NEAT1-203ENST00000601801 TMEM254Q8TBM7 123 aa8.04□□□□□ -1.12
NEAT1-203ENST00000601801 CD164Q04900 197 aa8.03□□□□□ -1.12
NEAT1-203ENST00000601801 C5orf47Q569G3 176 aa8.03□□□□□ -1.12
NEAT1-203ENST00000601801 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
NEAT1-203ENST00000601801 FAM236DA0A1B0GTK5 79 aa7.98□□□□□ -1.13
NEAT1-203ENST00000601801 H7BZZ5 65 aa7.98□□□□□ -1.13
NEAT1-203ENST00000601801 FAM236CP0DP71 79 aa7.98□□□□□ -1.13
NEAT1-203ENST00000601801 SEC61BP60468 96 aaKnown RBP7.98□□□□□ -1.13
NEAT1-203ENST00000601801 DEFB116Q30KQ4 102 aa7.98□□□□□ -1.13
NEAT1-203ENST00000601801 CASC2Q6XLA1 102 aa7.98□□□□□ -1.13
NEAT1-203ENST00000601801 H3BPC8 53 aa7.96□□□□□ -1.14
NEAT1-203ENST00000601801 MP68P56378 58 aa7.96□□□□□ -1.14
NEAT1-203ENST00000601801 CYSTM1Q9H1C7 97 aa7.96□□□□□ -1.14
NEAT1-203ENST00000601801 SNURFQ9Y675 71 aa7.96□□□□□ -1.14
NEAT1-203ENST00000601801 WFDC13Q8IUB5 93 aa7.94□□□□□ -1.14
NEAT1-203ENST00000601801 TP53AIP1Q9HCN2 124 aa7.92□□□□□ -1.14
NEAT1-203ENST00000601801 HRCT1Q6UXD1 115 aa7.91□□□□□ -1.14
NEAT1-203ENST00000601801 Q96NJ1 140 aa7.91□□□□□ -1.14
NEAT1-203ENST00000601801 SERP1Q9Y6X1 66 aa7.91□□□□□ -1.14
NEAT1-203ENST00000601801 hDV103S1A0JD37 113 aa7.9□□□□□ -1.14
NEAT1-203ENST00000601801 XP32Q5T750 250 aa7.9□□□□□ -1.14
NEAT1-203ENST00000601801 A0A1B0GVX0 72 aa7.89□□□□□ -1.15
NEAT1-203ENST00000601801 LIMD2Q9BT23 127 aa7.89□□□□□ -1.15
NEAT1-203ENST00000601801 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
NEAT1-203ENST00000601801 MMP24-AS1A0A0U1RRL7 71 aa7.88□□□□□ -1.15
NEAT1-203ENST00000601801 Q5XG85 94 aa7.88□□□□□ -1.15
NEAT1-203ENST00000601801 C8orf17Q9NRJ1 99 aa7.88□□□□□ -1.15
NEAT1-203ENST00000601801 ZCCHC13Q8WW36 166 aaKnown RBP7.86□□□□□ -1.15
NEAT1-203ENST00000601801 C8orf87E5RJ46 101 aa7.85□□□□□ -1.15
NEAT1-203ENST00000601801 IGHV6-1A0A0B4J1U7 121 aa7.83□□□□□ -1.16
NEAT1-203ENST00000601801 H0Y9P7 68 aa7.83□□□□□ -1.16
NEAT1-203ENST00000601801 TRAV22A0A0B4J277 110 aa7.81□□□□□ -1.16
NEAT1-203ENST00000601801 MRPL34Q9BQ48 92 aaKnown RBP7.81□□□□□ -1.16
NEAT1-203ENST00000601801 C9orf92A6NGG3 77 aa7.79□□□□□ -1.16
NEAT1-203ENST00000601801 LINC00208Q96KT6 92 aa7.79□□□□□ -1.16
NEAT1-203ENST00000601801 PCOTHQ58A44 107 aa7.77□□□□□ -1.17
NEAT1-203ENST00000601801 LCE2CQ5TA81 110 aa7.77□□□□□ -1.17
NEAT1-203ENST00000601801 SPANXA2-OT1Q8N9U9 137 aa7.77□□□□□ -1.17
NEAT1-203ENST00000601801 C1orf64Q8NEQ6 169 aa7.76□□□□□ -1.17
NEAT1-203ENST00000601801 SMIM26A0A096LP01 95 aa7.75□□□□□ -1.17
NEAT1-203ENST00000601801 NDUFS5O43920 106 aa7.75□□□□□ -1.17
NEAT1-203ENST00000601801 CYP4F30PQ9H0H9 118 aa7.74□□□□□ -1.17
NEAT1-203ENST00000601801 LINC00313P59037 77 aa7.71□□□□□ -1.18
NEAT1-203ENST00000601801 C1orf195Q5TG92 126 aa7.71□□□□□ -1.18
NEAT1-203ENST00000601801 MT1HP80294 61 aa7.7□□□□□ -1.18
NEAT1-203ENST00000601801 KRTAP19-2Q3LHN2 52 aa7.7□□□□□ -1.18
NEAT1-203ENST00000601801 LOC101927531A0A1B0GV80 90 aa7.68□□□□□ -1.18
NEAT1-203ENST00000601801 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
NEAT1-203ENST00000601801 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
NEAT1-203ENST00000601801 NOTCH2NLQ7Z3S9 236 aa7.63□□□□□ -1.19
NEAT1-203ENST00000601801 Q8N9P0 234 aaPredicted RBP7.63□□□□□ -1.19
NEAT1-203ENST00000601801 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
NEAT1-203ENST00000601801 KRTAP9-7A8MTY7 169 aa7.6□□□□□ -1.19
NEAT1-203ENST00000601801 V9GYY9 64 aa7.58□□□□□ -1.2
NEAT1-203ENST00000601801 COX6B2Q6YFQ2 88 aa7.56□□□□□ -1.2
NEAT1-203ENST00000601801 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.55□□□□□ -1.2
NEAT1-203ENST00000601801 FLGP20930 4061 aaPredicted RBP7.55□□□□□ -1.2
NEAT1-203ENST00000601801 M0R2T5 61 aa7.54□□□□□ -1.2
NEAT1-203ENST00000601801 KRTAP16-1A8MUX0 517 aa7.52□□□□□ -1.21
NEAT1-203ENST00000601801 Q5W150 140 aa7.51□□□□□ -1.21
NEAT1-203ENST00000601801 C4orf26Q17RF5 130 aa7.5□□□□□ -1.21
NEAT1-203ENST00000601801 Q1T7F1 81 aa7.5□□□□□ -1.21
NEAT1-203ENST00000601801 ATP11AUNQ6ZP68 121 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms