RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 C20orf166-AS1Q96NR2 134 aa8.2□□□□□ -1.1
IRF3-226ENST00000600453 M0R2T5 61 aa8.19□□□□□ -1.1
IRF3-226ENST00000600453 A8MUU9 505 aa8.18□□□□□ -1.1
IRF3-226ENST00000600453 ACYP1P07311 99 aa8.18□□□□□ -1.1
IRF3-226ENST00000600453 SIGMAR1Q99720 223 aa8.18□□□□□ -1.1
IRF3-226ENST00000600453 FAM240AA0A1B0GVK7 77 aa8.17□□□□□ -1.1
IRF3-226ENST00000600453 LINC00313P59037 77 aa8.17□□□□□ -1.1
IRF3-226ENST00000600453 RBM3P98179 157 aaKnown RBP8.17□□□□□ -1.1
IRF3-226ENST00000600453 KRTAP9-6A0A140TA67 174 aa8.16□□□□□ -1.1
IRF3-226ENST00000600453 CCKP06307 115 aa8.16□□□□□ -1.1
IRF3-226ENST00000600453 IGKV4-1P06312 121 aa8.16□□□□□ -1.1
IRF3-226ENST00000600453 A0A1B0GV72 72 aa8.14□□□□□ -1.11
IRF3-226ENST00000600453 DSCR8Q96T75 97 aa8.14□□□□□ -1.11
IRF3-226ENST00000600453 LOC110117498A0A087WWA1 95 aa8.13□□□□□ -1.11
IRF3-226ENST00000600453 DSCR10P59022 87 aa8.13□□□□□ -1.11
IRF3-226ENST00000600453 A0A1B0GW54 56 aa8.12□□□□□ -1.11
IRF3-226ENST00000600453 KRTAP10-6P60371 365 aaPredicted RBP8.11□□□□□ -1.11
IRF3-226ENST00000600453 LINC00472Q9H8W2 130 aa8.11□□□□□ -1.11
IRF3-226ENST00000600453 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
IRF3-226ENST00000600453 VPS25Q9BRG1 176 aa8.09□□□□□ -1.11
IRF3-226ENST00000600453 C14orf132Q9NPU4 83 aa8.08□□□□□ -1.12
IRF3-226ENST00000600453 DEFB116Q30KQ4 102 aa8.06□□□□□ -1.12
IRF3-226ENST00000600453 Q6ZQT0 140 aa8.06□□□□□ -1.12
IRF3-226ENST00000600453 IGHV6-1A0A0B4J1U7 121 aa8.05□□□□□ -1.12
IRF3-226ENST00000600453 C8orf87E5RJ46 101 aa8.04□□□□□ -1.12
IRF3-226ENST00000600453 J3KT08 172 aa8.04□□□□□ -1.12
IRF3-226ENST00000600453 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
IRF3-226ENST00000600453 FLGP20930 4061 aaPredicted RBP8.01□□□□□ -1.13
IRF3-226ENST00000600453 A0A1B0GVX0 72 aa8□□□□□ -1.13
IRF3-226ENST00000600453 NOTCH2NLQ7Z3S9 236 aa8□□□□□ -1.13
IRF3-226ENST00000600453 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
IRF3-226ENST00000600453 NDUFB1O75438 58 aa7.99□□□□□ -1.13
IRF3-226ENST00000600453 LINC00643Q86TS7 51 aa7.98□□□□□ -1.13
IRF3-226ENST00000600453 UBL5Q9BZL1 73 aa7.98□□□□□ -1.13
IRF3-226ENST00000600453 RBM12B-AS1Q9P1G2 102 aa7.96□□□□□ -1.14
IRF3-226ENST00000600453 FAM236DA0A1B0GTK5 79 aa7.94□□□□□ -1.14
IRF3-226ENST00000600453 FAM236CP0DP71 79 aa7.94□□□□□ -1.14
IRF3-226ENST00000600453 ATP5EP2Q5VTU8 51 aa7.94□□□□□ -1.14
IRF3-226ENST00000600453 LINC00846Q9NV44 126 aa7.93□□□□□ -1.14
IRF3-226ENST00000600453 IMUPQ9GZP8 106 aa7.92□□□□□ -1.14
IRF3-226ENST00000600453 FSIP2Q5CZC0 6907 aa7.9□□□□□ -1.15
IRF3-226ENST00000600453 A8MWP4 228 aa7.88□□□□□ -1.15
IRF3-226ENST00000600453 NREPQ16612 68 aa7.88□□□□□ -1.15
IRF3-226ENST00000600453 ZCCHC13Q8WW36 166 aaKnown RBP7.88□□□□□ -1.15
IRF3-226ENST00000600453 HRES1P13985 223 aa7.87□□□□□ -1.15
IRF3-226ENST00000600453 MPLKIPQ8TAP9 179 aa7.87□□□□□ -1.15
IRF3-226ENST00000600453 CXCL6P80162 114 aa7.86□□□□□ -1.15
IRF3-226ENST00000600453 Q6ZVQ6 151 aa7.86□□□□□ -1.15
IRF3-226ENST00000600453 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
IRF3-226ENST00000600453 C8orf17Q9NRJ1 99 aa7.85□□□□□ -1.15
IRF3-226ENST00000600453 SCGB1A1P11684 91 aa7.83□□□□□ -1.16
IRF3-226ENST00000600453 MT-ATP8P03928 68 aa7.82□□□□□ -1.16
IRF3-226ENST00000600453 SPINK7P58062 85 aa7.82□□□□□ -1.16
IRF3-226ENST00000600453 IGKV3D-7A0A0C4DH55 119 aa7.81□□□□□ -1.16
IRF3-226ENST00000600453 PRR15Q8IV56 129 aa7.81□□□□□ -1.16
IRF3-226ENST00000600453 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
IRF3-226ENST00000600453 BPY2O14599 106 aa7.79□□□□□ -1.16
IRF3-226ENST00000600453 TMEM254Q8TBM7 123 aa7.75□□□□□ -1.17
IRF3-226ENST00000600453 MRPL34Q9BQ48 92 aaKnown RBP7.74□□□□□ -1.17
IRF3-226ENST00000600453 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
IRF3-226ENST00000600453 HIST1H4AP62805 103 aaKnown RBP7.7□□□□□ -1.18
IRF3-226ENST00000600453 MMP24-AS1A0A0U1RRL7 71 aa7.69□□□□□ -1.18
IRF3-226ENST00000600453 NDUFS5O43920 106 aa7.68□□□□□ -1.18
IRF3-226ENST00000600453 MT2AP02795 61 aa7.68□□□□□ -1.18
IRF3-226ENST00000600453 WFDC13Q8IUB5 93 aa7.68□□□□□ -1.18
IRF3-226ENST00000600453 K7EQZ3 153 aa7.67□□□□□ -1.18
IRF3-226ENST00000600453 KRTAP10-10P60014 251 aa7.65□□□□□ -1.18
IRF3-226ENST00000600453 SMIM20Q8N5G0 67 aa7.64□□□□□ -1.19
IRF3-226ENST00000600453 ATOX1O00244 68 aa7.63□□□□□ -1.19
IRF3-226ENST00000600453 FAM236AA0A1B0GUQ0 79 aa7.62□□□□□ -1.19
IRF3-226ENST00000600453 FAM236BA0A1B0GV22 79 aa7.62□□□□□ -1.19
IRF3-226ENST00000600453 MT1FP04733 61 aa7.61□□□□□ -1.19
IRF3-226ENST00000600453 A0A087WVE0 104 aa7.58□□□□□ -1.2
IRF3-226ENST00000600453 CASC2Q6XLA1 102 aa7.58□□□□□ -1.2
IRF3-226ENST00000600453 HCG22E2RYF7 251 aa7.57□□□□□ -1.2
IRF3-226ENST00000600453 KRTAP9-3Q9BYQ3 159 aa7.57□□□□□ -1.2
IRF3-226ENST00000600453 H1FX-AS1Q4G0G2 97 aa7.56□□□□□ -1.2
IRF3-226ENST00000600453 C7orf65Q6ZTY9 151 aa7.55□□□□□ -1.2
IRF3-226ENST00000600453 Q8N9L7 120 aa7.55□□□□□ -1.2
IRF3-226ENST00000600453 ANAPC13Q9BS18 74 aa7.55□□□□□ -1.2
IRF3-226ENST00000600453 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
IRF3-226ENST00000600453 IGKV2-30P06310 120 aa7.54□□□□□ -1.2
IRF3-226ENST00000600453 PCP4P48539 62 aa7.52□□□□□ -1.21
IRF3-226ENST00000600453 Q5W150 140 aa7.52□□□□□ -1.21
IRF3-226ENST00000600453 TRAV7A0A075B6U4 112 aa7.51□□□□□ -1.21
IRF3-226ENST00000600453 LCE2BO14633 110 aa7.51□□□□□ -1.21
IRF3-226ENST00000600453 SERP2Q8N6R1 65 aa7.51□□□□□ -1.21
IRF3-226ENST00000600453 USH2AO75445 5202 aa7.48□□□□□ -1.21
IRF3-226ENST00000600453 UQCRQO14949 82 aa7.47□□□□□ -1.21
IRF3-226ENST00000600453 TP53AIP1Q9HCN2 124 aa7.47□□□□□ -1.21
IRF3-226ENST00000600453 COX7CP15954 63 aa7.46□□□□□ -1.22
IRF3-226ENST00000600453 OCR1Q9BZK8 76 aa7.44□□□□□ -1.22
IRF3-226ENST00000600453 C5orf47Q569G3 176 aa7.42□□□□□ -1.22
IRF3-226ENST00000600453 SSPOA2VEC9 5147 aa7.42□□□□□ -1.22
IRF3-226ENST00000600453 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.41□□□□□ -1.22
IRF3-226ENST00000600453 C4orf26Q17RF5 130 aa7.41□□□□□ -1.22
IRF3-226ENST00000600453 KRTAP19-1Q8IUB9 90 aa7.41□□□□□ -1.22
IRF3-226ENST00000600453 H3BPC8 53 aa7.39□□□□□ -1.23
IRF3-226ENST00000600453 MP68P56378 58 aa7.35□□□□□ -1.23
IRF3-226ENST00000600453 KRTAP9-7A8MTY7 169 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms