RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PLAC8Q9NZF1 115 aa6.93□□□□□ -1.3
ARHGEF1-220ENST00000600274 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
ARHGEF1-220ENST00000600274 DNAH17Q9UFH2 4485 aa6.92□□□□□ -1.3
ARHGEF1-220ENST00000600274 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
ARHGEF1-220ENST00000600274 IGLV7-43P04211 117 aa6.91□□□□□ -1.3
ARHGEF1-220ENST00000600274 FLG2Q5D862 2391 aaPredicted RBP6.91□□□□□ -1.3
ARHGEF1-220ENST00000600274 KTN1-AS1Q86SY8 53 aa6.91□□□□□ -1.3
ARHGEF1-220ENST00000600274 COA5Q86WW8 74 aa6.89□□□□□ -1.31
ARHGEF1-220ENST00000600274 DMBT1Q9UGM3 2413 aaPredicted RBP6.89□□□□□ -1.31
ARHGEF1-220ENST00000600274 Q1T7F1 81 aa6.89□□□□□ -1.31
ARHGEF1-220ENST00000600274 ZCCHC13Q8WW36 166 aaKnown RBP6.89□□□□□ -1.31
ARHGEF1-220ENST00000600274 KRTAP10-1P60331 282 aa6.88□□□□□ -1.31
ARHGEF1-220ENST00000600274 Q5VV11 94 aa6.88□□□□□ -1.31
ARHGEF1-220ENST00000600274 A0A087X002 238 aa6.87□□□□□ -1.31
ARHGEF1-220ENST00000600274 MMP24-AS1A0A0U1RRL7 71 aa6.87□□□□□ -1.31
ARHGEF1-220ENST00000600274 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
ARHGEF1-220ENST00000600274 KRTAP29-1A8MX34 341 aaPredicted RBP6.86□□□□□ -1.31
ARHGEF1-220ENST00000600274 HYDINQ4G0P3 5121 aa6.85□□□□□ -1.31
ARHGEF1-220ENST00000600274 C8orf17Q9NRJ1 99 aa6.85□□□□□ -1.31
ARHGEF1-220ENST00000600274 LINC00483Q53H64 154 aa6.84□□□□□ -1.31
ARHGEF1-220ENST00000600274 Q8N9P0 234 aaPredicted RBP6.84□□□□□ -1.31
ARHGEF1-220ENST00000600274 Q96NJ1 140 aa6.84□□□□□ -1.31
ARHGEF1-220ENST00000600274 LIMD2Q9BT23 127 aa6.84□□□□□ -1.31
ARHGEF1-220ENST00000600274 CYP4F30PQ9H0H9 118 aa6.84□□□□□ -1.31
ARHGEF1-220ENST00000600274 H3BS24 57 aa6.83□□□□□ -1.32
ARHGEF1-220ENST00000600274 LCA10Q71F78 164 aa6.82□□□□□ -1.32
ARHGEF1-220ENST00000600274 A0A1B0GVX0 72 aa6.82□□□□□ -1.32
ARHGEF1-220ENST00000600274 SMR3BP02814 79 aaPredicted RBP6.82□□□□□ -1.32
ARHGEF1-220ENST00000600274 LRP1BQ9NZR2 4599 aa6.82□□□□□ -1.32
ARHGEF1-220ENST00000600274 DNAH5Q8TE73 4624 aa6.81□□□□□ -1.32
ARHGEF1-220ENST00000600274 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
ARHGEF1-220ENST00000600274 LCE6AA0A183 80 aa6.8□□□□□ -1.32
ARHGEF1-220ENST00000600274 PRR26Q8N8Z3 221 aa6.8□□□□□ -1.32
ARHGEF1-220ENST00000600274 MRPL34Q9BQ48 92 aaKnown RBP6.77□□□□□ -1.33
ARHGEF1-220ENST00000600274 SPINK7P58062 85 aa6.76□□□□□ -1.33
ARHGEF1-220ENST00000600274 KRTAP21-3Q3LHN1 58 aa6.76□□□□□ -1.33
ARHGEF1-220ENST00000600274 PLA2G1BP04054 148 aaKnown RBP6.75□□□□□ -1.33
ARHGEF1-220ENST00000600274 H3BPC8 53 aa6.74□□□□□ -1.33
ARHGEF1-220ENST00000600274 LOC101927531A0A1B0GV80 90 aa6.74□□□□□ -1.33
ARHGEF1-220ENST00000600274 C8orf87E5RJ46 101 aa6.73□□□□□ -1.33
ARHGEF1-220ENST00000600274 SPANXA2-OT1Q8N9U9 137 aa6.73□□□□□ -1.33
ARHGEF1-220ENST00000600274 KRTAP13-2Q52LG2 175 aa6.73□□□□□ -1.33
ARHGEF1-220ENST00000600274 ATP11AUNQ6ZP68 121 aa6.72□□□□□ -1.33
ARHGEF1-220ENST00000600274 PKHD1P08F94 4074 aa6.72□□□□□ -1.33
ARHGEF1-220ENST00000600274 SSBP3-AS1Q7Z2R9 100 aa6.71□□□□□ -1.33
ARHGEF1-220ENST00000600274 IGLV7-46A0A075B6I9 117 aa6.71□□□□□ -1.34
ARHGEF1-220ENST00000600274 C7orf65Q6ZTY9 151 aa6.7□□□□□ -1.34
ARHGEF1-220ENST00000600274 TP53AIP1Q9HCN2 124 aa6.7□□□□□ -1.34
ARHGEF1-220ENST00000600274 TYMSOSQ8TAI1 123 aa6.7□□□□□ -1.34
ARHGEF1-220ENST00000600274 ALMS1Q8TCU4 4167 aa6.69□□□□□ -1.34
ARHGEF1-220ENST00000600274 SPINK1P00995 79 aa6.69□□□□□ -1.34
ARHGEF1-220ENST00000600274 HRES1P13985 223 aa6.69□□□□□ -1.34
ARHGEF1-220ENST00000600274 LINC00313P59037 77 aa6.69□□□□□ -1.34
ARHGEF1-220ENST00000600274 Q5W150 140 aa6.69□□□□□ -1.34
ARHGEF1-220ENST00000600274 VPS13BQ7Z7G8 4022 aa6.68□□□□□ -1.34
ARHGEF1-220ENST00000600274 IGKV2D-30A0A075B6S6 120 aa6.67□□□□□ -1.34
ARHGEF1-220ENST00000600274 IGKV2-30P06310 120 aa6.67□□□□□ -1.34
ARHGEF1-220ENST00000600274 FAT2Q9NYQ8 4349 aa6.66□□□□□ -1.34
ARHGEF1-220ENST00000600274 FAT1Q14517 4588 aa6.66□□□□□ -1.34
ARHGEF1-220ENST00000600274 Q6ZSA8 131 aa6.66□□□□□ -1.34
ARHGEF1-220ENST00000600274 A6NN06 94 aa6.64□□□□□ -1.35
ARHGEF1-220ENST00000600274 Q75L30 129 aa6.64□□□□□ -1.35
ARHGEF1-220ENST00000600274 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
ARHGEF1-220ENST00000600274 PKD1P98161 4303 aa6.62□□□□□ -1.35
ARHGEF1-220ENST00000600274 SACSQ9NZJ4 4579 aa6.62□□□□□ -1.35
ARHGEF1-220ENST00000600274 KRTAP1-4P0C5Y4 121 aa6.62□□□□□ -1.35
ARHGEF1-220ENST00000600274 ASB16-AS1Q495Z4 193 aa6.6□□□□□ -1.35
ARHGEF1-220ENST00000600274 A0A1B0GU69 56 aa6.6□□□□□ -1.35
ARHGEF1-220ENST00000600274 ACYP2P14621 99 aa6.6□□□□□ -1.35
ARHGEF1-220ENST00000600274 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
ARHGEF1-220ENST00000600274 C9orf92A6NGG3 77 aa6.58□□□□□ -1.36
ARHGEF1-220ENST00000600274 DYNC1H1Q14204 4646 aaKnown RBP6.58□□□□□ -1.36
ARHGEF1-220ENST00000600274 CRIPTQ9P021 101 aa6.57□□□□□ -1.36
ARHGEF1-220ENST00000600274 LINC00304Q8N9R0 145 aa6.56□□□□□ -1.36
ARHGEF1-220ENST00000600274 FAM229AH3BQW9 127 aa6.53□□□□□ -1.36
ARHGEF1-220ENST00000600274 LINC01554Q52M75 96 aa6.53□□□□□ -1.36
ARHGEF1-220ENST00000600274 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
ARHGEF1-220ENST00000600274 KMT2CQ8NEZ4 4911 aaKnown RBP6.52□□□□□ -1.37
ARHGEF1-220ENST00000600274 Q8N1X5 172 aa6.49□□□□□ -1.37
ARHGEF1-220ENST00000600274 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
ARHGEF1-220ENST00000600274 KRTAP13-3Q3SY46 172 aa6.45□□□□□ -1.38
ARHGEF1-220ENST00000600274 KRTAP16-1A8MUX0 517 aa6.43□□□□□ -1.38
ARHGEF1-220ENST00000600274 UQCR11O14957 56 aa6.42□□□□□ -1.38
ARHGEF1-220ENST00000600274 APOBP04114 4563 aaKnown RBP6.41□□□□□ -1.38
ARHGEF1-220ENST00000600274 A0A1B0GVY2 172 aa6.39□□□□□ -1.39
ARHGEF1-220ENST00000600274 LRP1Q07954 4544 aaKnown RBP6.38□□□□□ -1.39
ARHGEF1-220ENST00000600274 RYR2Q92736 4967 aa6.38□□□□□ -1.39
ARHGEF1-220ENST00000600274 DMAC1Q96GE9 116 aa6.36□□□□□ -1.39
ARHGEF1-220ENST00000600274 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
ARHGEF1-220ENST00000600274 Q5VSD8 79 aa6.32□□□□□ -1.4
ARHGEF1-220ENST00000600274 KRTAP10-4P60372 401 aaPredicted RBP6.29□□□□□ -1.4
ARHGEF1-220ENST00000600274 RYR3Q15413 4870 aa6.28□□□□□ -1.4
ARHGEF1-220ENST00000600274 KIAA1109Q2LD37 5005 aa6.27□□□□□ -1.41
ARHGEF1-220ENST00000600274 SPATA8Q6RVD6 105 aa6.24□□□□□ -1.41
ARHGEF1-220ENST00000600274 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
ARHGEF1-220ENST00000600274 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
ARHGEF1-220ENST00000600274 FAT3Q8TDW7 4589 aa6.19□□□□□ -1.42
ARHGEF1-220ENST00000600274 A8MUU9 505 aa6.19□□□□□ -1.42
ARHGEF1-220ENST00000600274 SPINT4Q6UDR6 99 aa6.19□□□□□ -1.42
ARHGEF1-220ENST00000600274 C20orf166-AS1Q96NR2 134 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms