RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 OBSCN-AS1Q96MR7 158 aa8.87□□□□□ -0.99
SHKBP1-215ENST00000597649 PRO0461Q9UI25 63 aa8.87□□□□□ -0.99
SHKBP1-215ENST00000597649 LOC110117498A0A087WWA1 95 aa8.86□□□□□ -0.99
SHKBP1-215ENST00000597649 Q6ZQT0 140 aa8.85□□□□□ -0.99
SHKBP1-215ENST00000597649 C21orf62-AS1Q17RA5 79 aa8.84□□□□□ -0.99
SHKBP1-215ENST00000597649 C1orf195Q5TG92 126 aa8.82□□□□□ -1
SHKBP1-215ENST00000597649 USH2AO75445 5202 aa8.82□□□□□ -1
SHKBP1-215ENST00000597649 SSPOA2VEC9 5147 aa8.81□□□□□ -1
SHKBP1-215ENST00000597649 M0R2T5 61 aa8.81□□□□□ -1
SHKBP1-215ENST00000597649 A0A1B0GW54 56 aa8.79□□□□□ -1
SHKBP1-215ENST00000597649 ETDBQ3ZM63 59 aa8.76□□□□□ -1.01
SHKBP1-215ENST00000597649 KRTAP9-7A8MTY7 169 aa8.73□□□□□ -1.01
SHKBP1-215ENST00000597649 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.72□□□□□ -1.01
SHKBP1-215ENST00000597649 COX6B2Q6YFQ2 88 aa8.71□□□□□ -1.02
SHKBP1-215ENST00000597649 IGKV4-1P06312 121 aa8.7□□□□□ -1.02
SHKBP1-215ENST00000597649 NREPQ16612 68 aa8.7□□□□□ -1.02
SHKBP1-215ENST00000597649 Q96NJ1 140 aa8.7□□□□□ -1.02
SHKBP1-215ENST00000597649 SIGMAR1Q99720 223 aa8.7□□□□□ -1.02
SHKBP1-215ENST00000597649 RPL37P61927 97 aaKnown RBP8.69□□□□□ -1.02
SHKBP1-215ENST00000597649 DEFB116Q30KQ4 102 aa8.69□□□□□ -1.02
SHKBP1-215ENST00000597649 LINC00472Q9H8W2 130 aa8.69□□□□□ -1.02
SHKBP1-215ENST00000597649 J3KT08 172 aa8.66□□□□□ -1.02
SHKBP1-215ENST00000597649 FCGBPQ9Y6R7 5405 aaPredicted RBP8.66□□□□□ -1.02
SHKBP1-215ENST00000597649 NDUFB1O75438 58 aa8.61□□□□□ -1.03
SHKBP1-215ENST00000597649 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
SHKBP1-215ENST00000597649 Q6ZVQ6 151 aa8.59□□□□□ -1.03
SHKBP1-215ENST00000597649 LINC00846Q9NV44 126 aa8.59□□□□□ -1.03
SHKBP1-215ENST00000597649 IGHV6-1A0A0B4J1U7 121 aa8.58□□□□□ -1.04
SHKBP1-215ENST00000597649 BPY2O14599 106 aa8.58□□□□□ -1.04
SHKBP1-215ENST00000597649 A0A1B0GVX0 72 aa8.56□□□□□ -1.04
SHKBP1-215ENST00000597649 ACYP1P07311 99 aa8.56□□□□□ -1.04
SHKBP1-215ENST00000597649 DSCR10P59022 87 aa8.56□□□□□ -1.04
SHKBP1-215ENST00000597649 LINC00313P59037 77 aa8.56□□□□□ -1.04
SHKBP1-215ENST00000597649 A8MWP4 228 aa8.55□□□□□ -1.04
SHKBP1-215ENST00000597649 KRTAP9-8Q9BYQ0 159 aa8.55□□□□□ -1.04
SHKBP1-215ENST00000597649 C8orf87E5RJ46 101 aa8.53□□□□□ -1.04
SHKBP1-215ENST00000597649 FAM240AA0A1B0GVK7 77 aa8.51□□□□□ -1.05
SHKBP1-215ENST00000597649 J3QR89 54 aa8.51□□□□□ -1.05
SHKBP1-215ENST00000597649 IGKV3D-7A0A0C4DH55 119 aa8.5□□□□□ -1.05
SHKBP1-215ENST00000597649 PRR15Q8IV56 129 aa8.49□□□□□ -1.05
SHKBP1-215ENST00000597649 NOTCH2NLQ7Z3S9 236 aa8.48□□□□□ -1.05
SHKBP1-215ENST00000597649 K7EQZ3 153 aa8.46□□□□□ -1.06
SHKBP1-215ENST00000597649 C8orf17Q9NRJ1 99 aa8.46□□□□□ -1.06
SHKBP1-215ENST00000597649 K7ERU9 68 aa8.44□□□□□ -1.06
SHKBP1-215ENST00000597649 Q75L30 129 aa8.44□□□□□ -1.06
SHKBP1-215ENST00000597649 ATP11AUNQ6ZP68 121 aa8.43□□□□□ -1.06
SHKBP1-215ENST00000597649 SYNE2Q8WXH0 6885 aaKnown RBP8.43□□□□□ -1.06
SHKBP1-215ENST00000597649 KRTAP16-1A8MUX0 517 aa8.42□□□□□ -1.06
SHKBP1-215ENST00000597649 CXCL6P80162 114 aa8.42□□□□□ -1.06
SHKBP1-215ENST00000597649 Q8N9L7 120 aa8.42□□□□□ -1.06
SHKBP1-215ENST00000597649 C20orf166-AS1Q96NR2 134 aa8.42□□□□□ -1.06
SHKBP1-215ENST00000597649 A8MUU9 505 aa8.4□□□□□ -1.06
SHKBP1-215ENST00000597649 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
SHKBP1-215ENST00000597649 MMP24-AS1A0A0U1RRL7 71 aa8.38□□□□□ -1.07
SHKBP1-215ENST00000597649 hDV103S1A0JD37 113 aa8.38□□□□□ -1.07
SHKBP1-215ENST00000597649 ATP5EP2Q5VTU8 51 aa8.38□□□□□ -1.07
SHKBP1-215ENST00000597649 MACF1Q9UPN3 7388 aaKnown RBP8.38□□□□□ -1.07
SHKBP1-215ENST00000597649 LCE2BO14633 110 aa8.37□□□□□ -1.07
SHKBP1-215ENST00000597649 LINC00643Q86TS7 51 aa8.37□□□□□ -1.07
SHKBP1-215ENST00000597649 MT2AP02795 61 aa8.36□□□□□ -1.07
SHKBP1-215ENST00000597649 TMEM254Q8TBM7 123 aa8.36□□□□□ -1.07
SHKBP1-215ENST00000597649 CASC2Q6XLA1 102 aa8.35□□□□□ -1.07
SHKBP1-215ENST00000597649 WFDC13Q8IUB5 93 aa8.35□□□□□ -1.07
SHKBP1-215ENST00000597649 MRPL34Q9BQ48 92 aaKnown RBP8.35□□□□□ -1.07
SHKBP1-215ENST00000597649 HCG22E2RYF7 251 aa8.32□□□□□ -1.08
SHKBP1-215ENST00000597649 NDUFS5O43920 106 aa8.32□□□□□ -1.08
SHKBP1-215ENST00000597649 Q8N9P0 234 aaPredicted RBP8.32□□□□□ -1.08
SHKBP1-215ENST00000597649 MT1FP04733 61 aa8.31□□□□□ -1.08
SHKBP1-215ENST00000597649 HIST1H4AP62805 103 aaKnown RBP8.31□□□□□ -1.08
SHKBP1-215ENST00000597649 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
SHKBP1-215ENST00000597649 ZCCHC13Q8WW36 166 aaKnown RBP8.26□□□□□ -1.09
SHKBP1-215ENST00000597649 KRTAP10-10P60014 251 aa8.21□□□□□ -1.1
SHKBP1-215ENST00000597649 A0A087WVE0 104 aa8.18□□□□□ -1.1
SHKBP1-215ENST00000597649 TP53AIP1Q9HCN2 124 aa8.16□□□□□ -1.1
SHKBP1-215ENST00000597649 MPLKIPQ8TAP9 179 aa8.14□□□□□ -1.11
SHKBP1-215ENST00000597649 FAM236DA0A1B0GTK5 79 aa8.13□□□□□ -1.11
SHKBP1-215ENST00000597649 FAM236CP0DP71 79 aa8.13□□□□□ -1.11
SHKBP1-215ENST00000597649 MT-ATP8P03928 68 aa8.11□□□□□ -1.11
SHKBP1-215ENST00000597649 HRES1P13985 223 aa8.11□□□□□ -1.11
SHKBP1-215ENST00000597649 SPINK7P58062 85 aa8.11□□□□□ -1.11
SHKBP1-215ENST00000597649 Q5W150 140 aa8.11□□□□□ -1.11
SHKBP1-215ENST00000597649 KRTAP19-6Q3LI70 58 aa8.1□□□□□ -1.11
SHKBP1-215ENST00000597649 IMUPQ9GZP8 106 aa8.1□□□□□ -1.11
SHKBP1-215ENST00000597649 SCGB1A1P11684 91 aa8.06□□□□□ -1.12
SHKBP1-215ENST00000597649 IGKV2D-30A0A075B6S6 120 aa8.05□□□□□ -1.12
SHKBP1-215ENST00000597649 UQCRQO14949 82 aa8.05□□□□□ -1.12
SHKBP1-215ENST00000597649 IGKV2-30P06310 120 aa8.05□□□□□ -1.12
SHKBP1-215ENST00000597649 RBM12B-AS1Q9P1G2 102 aa8.05□□□□□ -1.12
SHKBP1-215ENST00000597649 C7orf65Q6ZTY9 151 aa8.03□□□□□ -1.12
SHKBP1-215ENST00000597649 TRAV22A0A0B4J277 110 aa8.01□□□□□ -1.13
SHKBP1-215ENST00000597649 KRTAP6-3Q3LI67 103 aa8□□□□□ -1.13
SHKBP1-215ENST00000597649 FAM236AA0A1B0GUQ0 79 aa7.96□□□□□ -1.14
SHKBP1-215ENST00000597649 FAM236BA0A1B0GV22 79 aa7.96□□□□□ -1.14
SHKBP1-215ENST00000597649 H0Y9P7 68 aa7.96□□□□□ -1.14
SHKBP1-215ENST00000597649 ATOX1O00244 68 aa7.96□□□□□ -1.14
SHKBP1-215ENST00000597649 OCR1Q9BZK8 76 aa7.96□□□□□ -1.14
SHKBP1-215ENST00000597649 NEBP20929 6669 aa7.96□□□□□ -1.14
SHKBP1-215ENST00000597649 MP68P56378 58 aa7.94□□□□□ -1.14
SHKBP1-215ENST00000597649 LOC101927531A0A1B0GV80 90 aa7.93□□□□□ -1.14
SHKBP1-215ENST00000597649 C5orf47Q569G3 176 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms