RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 ATOX1O00244 68 aa4.52□□□□□ -1.69
SMAD4-215ENST00000592911 TRACP01848 142 aa4.52□□□□□ -1.69
SMAD4-215ENST00000592911 COX7CP15954 63 aa4.52□□□□□ -1.69
SMAD4-215ENST00000592911 LINC00643Q86TS7 51 aa4.52□□□□□ -1.69
SMAD4-215ENST00000592911 ST20-AS1Q8NBB2 130 aa4.52□□□□□ -1.69
SMAD4-215ENST00000592911 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
SMAD4-215ENST00000592911 A0A0B4J2C4 111 aa4.51□□□□□ -1.69
SMAD4-215ENST00000592911 HRCT1Q6UXD1 115 aa4.51□□□□□ -1.69
SMAD4-215ENST00000592911 SCGB1D4Q6XE38 83 aa4.51□□□□□ -1.69
SMAD4-215ENST00000592911 ATP11AUNQ6ZP68 121 aa4.51□□□□□ -1.69
SMAD4-215ENST00000592911 Q75L30 129 aa4.51□□□□□ -1.69
SMAD4-215ENST00000592911 SMIM29Q86T20 159 aa4.51□□□□□ -1.69
SMAD4-215ENST00000592911 TEX49A0A1B0GTD5 131 aa4.5□□□□□ -1.69
SMAD4-215ENST00000592911 COX6CP09669 75 aa4.5□□□□□ -1.69
SMAD4-215ENST00000592911 ZNF815PA8K554 130 aa4.49□□□□□ -1.69
SMAD4-215ENST00000592911 LEPROTO15243 131 aa4.49□□□□□ -1.69
SMAD4-215ENST00000592911 COPS9Q8WXC6 57 aa4.49□□□□□ -1.69
SMAD4-215ENST00000592911 SYNE2Q8WXH0 6885 aaKnown RBP4.49□□□□□ -1.69
SMAD4-215ENST00000592911 TRBV7-6A0A0J9YX20 115 aa4.48□□□□□ -1.69
SMAD4-215ENST00000592911 FAM236AA0A1B0GUQ0 79 aa4.48□□□□□ -1.69
SMAD4-215ENST00000592911 FAM236BA0A1B0GV22 79 aa4.48□□□□□ -1.69
SMAD4-215ENST00000592911 ELOF1P60002 83 aaKnown RBP4.47□□□□□ -1.69
SMAD4-215ENST00000592911 TTTY13Q9BZ97 58 aa4.47□□□□□ -1.69
SMAD4-215ENST00000592911 J3QQQ9 107 aa4.46□□□□□ -1.7
SMAD4-215ENST00000592911 C6orf99Q4VX62 202 aa4.46□□□□□ -1.7
SMAD4-215ENST00000592911 IGLV5-48A0A075B6I7 105 aa4.45□□□□□ -1.7
SMAD4-215ENST00000592911 SEC61GP60059 68 aa4.45□□□□□ -1.7
SMAD4-215ENST00000592911 HIST1H4AP62805 103 aaKnown RBP4.45□□□□□ -1.7
SMAD4-215ENST00000592911 Q1RN00 199 aa4.45□□□□□ -1.7
SMAD4-215ENST00000592911 LGALS3P17931 250 aaKnown RBP4.44□□□□□ -1.7
SMAD4-215ENST00000592911 COX7BP24311 80 aa4.44□□□□□ -1.7
SMAD4-215ENST00000592911 TSPEAR-AS2P59090 65 aa4.44□□□□□ -1.7
SMAD4-215ENST00000592911 SERP2Q8N6R1 65 aa4.44□□□□□ -1.7
SMAD4-215ENST00000592911 V9GYY9 64 aa4.44□□□□□ -1.7
SMAD4-215ENST00000592911 MT2AP02795 61 aa4.43□□□□□ -1.7
SMAD4-215ENST00000592911 TIMM17BO60830 172 aa4.42□□□□□ -1.7
SMAD4-215ENST00000592911 SOSTDC1Q6X4U4 206 aa4.42□□□□□ -1.7
SMAD4-215ENST00000592911 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
SMAD4-215ENST00000592911 LST1O00453 97 aa4.41□□□□□ -1.7
SMAD4-215ENST00000592911 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
SMAD4-215ENST00000592911 KRTAP19-6Q3LI70 58 aa4.41□□□□□ -1.7
SMAD4-215ENST00000592911 A0A0J9YXY3 114 aa4.4□□□□□ -1.71
SMAD4-215ENST00000592911 NPC2P61916 151 aa4.4□□□□□ -1.71
SMAD4-215ENST00000592911 Q6JHZ5 121 aa4.4□□□□□ -1.71
SMAD4-215ENST00000592911 DEFB105AQ8NG35 78 aa4.4□□□□□ -1.71
SMAD4-215ENST00000592911 C20orf166-AS1Q96NR2 134 aa4.4□□□□□ -1.71
SMAD4-215ENST00000592911 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
SMAD4-215ENST00000592911 hADV29S1A0JD25 119 aa4.39□□□□□ -1.71
SMAD4-215ENST00000592911 ATP5EP56381 51 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-215ENST00000592911 C4orf26Q17RF5 130 aa4.39□□□□□ -1.71
SMAD4-215ENST00000592911 LINC00308Q8TCZ7 52 aa4.39□□□□□ -1.71
SMAD4-215ENST00000592911 F8WEM9 126 aa4.38□□□□□ -1.71
SMAD4-215ENST00000592911 MT1FP04733 61 aa4.38□□□□□ -1.71
SMAD4-215ENST00000592911 ADAMTSL4-AS1Q5T5F5 129 aa4.38□□□□□ -1.71
SMAD4-215ENST00000592911 ATP5EP2Q5VTU8 51 aa4.38□□□□□ -1.71
SMAD4-215ENST00000592911 MPLKIPQ8TAP9 179 aa4.38□□□□□ -1.71
SMAD4-215ENST00000592911 OBSCN-AS1Q96MR7 158 aa4.38□□□□□ -1.71
SMAD4-215ENST00000592911 A8MUU9 505 aa4.37□□□□□ -1.71
SMAD4-215ENST00000592911 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
SMAD4-215ENST00000592911 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-215ENST00000592911 IGKV2-30P06310 120 aa4.36□□□□□ -1.71
SMAD4-215ENST00000592911 MUSTN1Q8IVN3 82 aa4.36□□□□□ -1.71
SMAD4-215ENST00000592911 CLEC2BQ92478 149 aa4.36□□□□□ -1.71
SMAD4-215ENST00000592911 LITAFQ99732 161 aa4.36□□□□□ -1.71
SMAD4-215ENST00000592911 TRAV13-2A0A0B4J235 113 aa4.35□□□□□ -1.71
SMAD4-215ENST00000592911 FAM236DA0A1B0GTK5 79 aa4.35□□□□□ -1.71
SMAD4-215ENST00000592911 NDUFC1O43677 76 aa4.35□□□□□ -1.71
SMAD4-215ENST00000592911 FAM236CP0DP71 79 aa4.35□□□□□ -1.71
SMAD4-215ENST00000592911 IGFL1Q6UW32 110 aa4.34□□□□□ -1.71
SMAD4-215ENST00000592911 DSCR8Q96T75 97 aa4.34□□□□□ -1.71
SMAD4-215ENST00000592911 RBM12B-AS1Q9P1G2 102 aa4.34□□□□□ -1.71
SMAD4-215ENST00000592911 Q96NJ1 140 aa4.33□□□□□ -1.72
SMAD4-215ENST00000592911 DNAL4O96015 105 aa4.32□□□□□ -1.72
SMAD4-215ENST00000592911 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
SMAD4-215ENST00000592911 A0A0G2JQZ4 141 aa4.31□□□□□ -1.72
SMAD4-215ENST00000592911 BAALC-AS2P0C853 105 aa4.31□□□□□ -1.72
SMAD4-215ENST00000592911 NEBP20929 6669 aa4.3□□□□□ -1.72
SMAD4-215ENST00000592911 TRAV7A0A075B6U4 112 aa4.29□□□□□ -1.72
SMAD4-215ENST00000592911 KLKP1Q107X0 134 aa4.28□□□□□ -1.72
SMAD4-215ENST00000592911 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
SMAD4-215ENST00000592911 H0YGX0 51 aa4.27□□□□□ -1.73
SMAD4-215ENST00000592911 A8MWP4 228 aa4.26□□□□□ -1.73
SMAD4-215ENST00000592911 PMAIP1Q13794 54 aa4.26□□□□□ -1.73
SMAD4-215ENST00000592911 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
SMAD4-215ENST00000592911 JMJD7-PLA2G4BH0Y9G9 81 aa4.25□□□□□ -1.73
SMAD4-215ENST00000592911 H7BZZ5 65 aa4.25□□□□□ -1.73
SMAD4-215ENST00000592911 HRES1P13985 223 aa4.25□□□□□ -1.73
SMAD4-215ENST00000592911 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-215ENST00000592911 LINC00575Q6W349 94 aa4.25□□□□□ -1.73
SMAD4-215ENST00000592911 PRR15Q8IV56 129 aa4.25□□□□□ -1.73
SMAD4-215ENST00000592911 Q6ZQY7 126 aa4.24□□□□□ -1.73
SMAD4-215ENST00000592911 SMIM11BQ8TCY0 68 aa4.24□□□□□ -1.73
SMAD4-215ENST00000592911 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
SMAD4-215ENST00000592911 CYSTM1Q9H1C7 97 aa4.24□□□□□ -1.73
SMAD4-215ENST00000592911 CCKP06307 115 aa4.23□□□□□ -1.73
SMAD4-215ENST00000592911 C20orf197Q8N268 126 aa4.23□□□□□ -1.73
SMAD4-215ENST00000592911 MUC12Q9UKN1 5478 aa4.23□□□□□ -1.73
SMAD4-215ENST00000592911 IGKV3D-7A0A0C4DH55 119 aa4.22□□□□□ -1.73
SMAD4-215ENST00000592911 H3BQ85 93 aa4.22□□□□□ -1.73
SMAD4-215ENST00000592911 RBM3P98179 157 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms