RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 OBSCN-AS1Q96MR7 158 aa5.39□□□□□ -1.55
BRCA1-226ENST00000591534 SPINK1P00995 79 aa5.38□□□□□ -1.55
BRCA1-226ENST00000591534 LINC01547P58512 204 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-226ENST00000591534 Q8N377 158 aa5.38□□□□□ -1.55
BRCA1-226ENST00000591534 C3orf22Q8N5N4 141 aa5.38□□□□□ -1.55
BRCA1-226ENST00000591534 SPRR4Q96PI1 79 aa5.38□□□□□ -1.55
BRCA1-226ENST00000591534 IGLV8-61A0A075B6I0 122 aa5.37□□□□□ -1.55
BRCA1-226ENST00000591534 SSBP3-AS1Q7Z2R9 100 aa5.36□□□□□ -1.55
BRCA1-226ENST00000591534 MTURNQ8N3F0 131 aa5.36□□□□□ -1.55
BRCA1-226ENST00000591534 Q8NBF4 154 aa5.36□□□□□ -1.55
BRCA1-226ENST00000591534 CCKP06307 115 aa5.35□□□□□ -1.55
BRCA1-226ENST00000591534 ASB16-AS1Q495Z4 193 aa5.35□□□□□ -1.55
BRCA1-226ENST00000591534 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
BRCA1-226ENST00000591534 TRBV7-4A0A0J9YYF1 115 aa5.34□□□□□ -1.55
BRCA1-226ENST00000591534 ERC2-IT1O76042 136 aa5.34□□□□□ -1.55
BRCA1-226ENST00000591534 UBL5Q9BZL1 73 aa5.34□□□□□ -1.55
BRCA1-226ENST00000591534 SS18L2Q9UHA2 77 aa5.34□□□□□ -1.55
BRCA1-226ENST00000591534 MUC17Q685J3 4493 aa5.34□□□□□ -1.56
BRCA1-226ENST00000591534 RPS29P62273 56 aaKnown RBP5.33□□□□□ -1.56
BRCA1-226ENST00000591534 CD164Q04900 197 aa5.33□□□□□ -1.56
BRCA1-226ENST00000591534 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
BRCA1-226ENST00000591534 C9orf153Q5TBE3 101 aa5.33□□□□□ -1.56
BRCA1-226ENST00000591534 Q6Q795 121 aa5.33□□□□□ -1.56
BRCA1-226ENST00000591534 ST20-AS1Q8NBB2 130 aa5.33□□□□□ -1.56
BRCA1-226ENST00000591534 C14orf132Q9NPU4 83 aa5.33□□□□□ -1.56
BRCA1-226ENST00000591534 Q6ZQT0 140 aa5.32□□□□□ -1.56
BRCA1-226ENST00000591534 ATP5EP2Q5VTU8 51 aa5.31□□□□□ -1.56
BRCA1-226ENST00000591534 IGLV9-49A0A0B4J1Y8 123 aa5.29□□□□□ -1.56
BRCA1-226ENST00000591534 MOBPQ13875 183 aa5.29□□□□□ -1.56
BRCA1-226ENST00000591534 SMIM29Q86T20 159 aa5.29□□□□□ -1.56
BRCA1-226ENST00000591534 VPS25Q9BRG1 176 aa5.29□□□□□ -1.56
BRCA1-226ENST00000591534 LIMD2Q9BT23 127 aa5.28□□□□□ -1.56
BRCA1-226ENST00000591534 NREPQ16612 68 aa5.27□□□□□ -1.57
BRCA1-226ENST00000591534 LINC00643Q86TS7 51 aa5.27□□□□□ -1.57
BRCA1-226ENST00000591534 TRBV7-7A0A0K0K1E9 115 aa5.26□□□□□ -1.57
BRCA1-226ENST00000591534 J3KT08 172 aa5.26□□□□□ -1.57
BRCA1-226ENST00000591534 IGFL1Q6UW32 110 aa5.26□□□□□ -1.57
BRCA1-226ENST00000591534 IMUPQ9GZP8 106 aa5.24□□□□□ -1.57
BRCA1-226ENST00000591534 A0A1B0GV72 72 aa5.23□□□□□ -1.57
BRCA1-226ENST00000591534 CXCL6P80162 114 aa5.23□□□□□ -1.57
BRCA1-226ENST00000591534 Q5XG85 94 aa5.23□□□□□ -1.57
BRCA1-226ENST00000591534 SIGMAR1Q99720 223 aa5.22□□□□□ -1.57
BRCA1-226ENST00000591534 NDUFB1O75438 58 aa5.21□□□□□ -1.58
BRCA1-226ENST00000591534 A0A087WSZ3 146 aa5.2□□□□□ -1.58
BRCA1-226ENST00000591534 A0A1W2PNM2 257 aa5.2□□□□□ -1.58
BRCA1-226ENST00000591534 BPY2O14599 106 aa5.2□□□□□ -1.58
BRCA1-226ENST00000591534 KRTAP4-1Q9BYQ7 146 aa5.2□□□□□ -1.58
BRCA1-226ENST00000591534 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
BRCA1-226ENST00000591534 LINC00846Q9NV44 126 aa5.19□□□□□ -1.58
BRCA1-226ENST00000591534 FSIP2Q5CZC0 6907 aa5.18□□□□□ -1.58
BRCA1-226ENST00000591534 Q6ZVQ6 151 aa5.18□□□□□ -1.58
BRCA1-226ENST00000591534 PCOTHQ58A44 107 aa5.15□□□□□ -1.59
BRCA1-226ENST00000591534 HRCT1Q6UXD1 115 aa5.14□□□□□ -1.59
BRCA1-226ENST00000591534 PRAC1Q96KF2 57 aa5.14□□□□□ -1.59
BRCA1-226ENST00000591534 LCE1AQ5T7P2 110 aa5.13□□□□□ -1.59
BRCA1-226ENST00000591534 A0A0G2JQZ4 141 aa5.12□□□□□ -1.59
BRCA1-226ENST00000591534 C9orf92A6NGG3 77 aa5.12□□□□□ -1.59
BRCA1-226ENST00000591534 A8MWP4 228 aa5.12□□□□□ -1.59
BRCA1-226ENST00000591534 SCGB1A1P11684 91 aa5.12□□□□□ -1.59
BRCA1-226ENST00000591534 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
BRCA1-226ENST00000591534 HIST1H4AP62805 103 aaKnown RBP5.11□□□□□ -1.59
BRCA1-226ENST00000591534 MT1HP80294 61 aa5.11□□□□□ -1.59
BRCA1-226ENST00000591534 LINC00472Q9H8W2 130 aa5.11□□□□□ -1.59
BRCA1-226ENST00000591534 C8orf87E5RJ46 101 aa5.1□□□□□ -1.59
BRCA1-226ENST00000591534 M0R2T5 61 aa5.1□□□□□ -1.59
BRCA1-226ENST00000591534 IGKV4-1P06312 121 aa5.1□□□□□ -1.59
BRCA1-226ENST00000591534 COX6B2Q6YFQ2 88 aa5.09□□□□□ -1.59
BRCA1-226ENST00000591534 PRR15Q8IV56 129 aa5.08□□□□□ -1.6
BRCA1-226ENST00000591534 IGKV3D-7A0A0C4DH55 119 aa5.07□□□□□ -1.6
BRCA1-226ENST00000591534 KRTAP19-2Q3LHN2 52 aa5.07□□□□□ -1.6
BRCA1-226ENST00000591534 A0A1B0GVX0 72 aa5.05□□□□□ -1.6
BRCA1-226ENST00000591534 ATOX1O00244 68 aa5.05□□□□□ -1.6
BRCA1-226ENST00000591534 MT-ATP8P03928 68 aa5.05□□□□□ -1.6
BRCA1-226ENST00000591534 RPL37P61927 97 aaKnown RBP5.05□□□□□ -1.6
BRCA1-226ENST00000591534 HCG22E2RYF7 251 aa5.04□□□□□ -1.6
BRCA1-226ENST00000591534 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-226ENST00000591534 C1orf195Q5TG92 126 aa5.04□□□□□ -1.6
BRCA1-226ENST00000591534 LINC00313P59037 77 aa5.03□□□□□ -1.6
BRCA1-226ENST00000591534 TP53AIP1Q9HCN2 124 aa5.03□□□□□ -1.6
BRCA1-226ENST00000591534 DSCR10P59022 87 aa5.02□□□□□ -1.61
BRCA1-226ENST00000591534 Q96NJ1 140 aa5.02□□□□□ -1.61
BRCA1-226ENST00000591534 IGHV6-1A0A0B4J1U7 121 aa5.01□□□□□ -1.61
BRCA1-226ENST00000591534 hDV103S1A0JD37 113 aa5.01□□□□□ -1.61
BRCA1-226ENST00000591534 K7EQZ3 153 aa5.01□□□□□ -1.61
BRCA1-226ENST00000591534 CASC2Q6XLA1 102 aa5.01□□□□□ -1.61
BRCA1-226ENST00000591534 NOTCH2NLQ7Z3S9 236 aa5.01□□□□□ -1.61
BRCA1-226ENST00000591534 TMEM254Q8TBM7 123 aa5□□□□□ -1.61
BRCA1-226ENST00000591534 FAM236AA0A1B0GUQ0 79 aa4.99□□□□□ -1.61
BRCA1-226ENST00000591534 FAM236BA0A1B0GV22 79 aa4.99□□□□□ -1.61
BRCA1-226ENST00000591534 DEFB116Q30KQ4 102 aa4.99□□□□□ -1.61
BRCA1-226ENST00000591534 ATP11AUNQ6ZP68 121 aa4.99□□□□□ -1.61
BRCA1-226ENST00000591534 C8orf17Q9NRJ1 99 aa4.99□□□□□ -1.61
BRCA1-226ENST00000591534 MRPL34Q9BQ48 92 aaKnown RBP4.97□□□□□ -1.61
BRCA1-226ENST00000591534 UQCRQO14949 82 aa4.96□□□□□ -1.62
BRCA1-226ENST00000591534 TRAV7A0A075B6U4 112 aa4.95□□□□□ -1.62
BRCA1-226ENST00000591534 H3BPC8 53 aa4.95□□□□□ -1.62
BRCA1-226ENST00000591534 C5orf47Q569G3 176 aa4.95□□□□□ -1.62
BRCA1-226ENST00000591534 Q8N9L7 120 aa4.95□□□□□ -1.62
BRCA1-226ENST00000591534 ANAPC13Q9BS18 74 aa4.95□□□□□ -1.62
BRCA1-226ENST00000591534 MMP24-AS1A0A0U1RRL7 71 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms