RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 TRRAPQ9Y4A5 3859 aa7.01□□□□□ -1.29
TREM1-206ENST00000589882 K7EIL1 84 aa7□□□□□ -1.29
TREM1-206ENST00000589882 Q5W150 140 aa7□□□□□ -1.29
TREM1-206ENST00000589882 IGLV7-43P04211 117 aa7□□□□□ -1.29
TREM1-206ENST00000589882 CMYA5Q8N3K9 4069 aa6.99□□□□□ -1.29
TREM1-206ENST00000589882 PKD1L1Q8TDX9 2849 aa6.98□□□□□ -1.29
TREM1-206ENST00000589882 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
TREM1-206ENST00000589882 TENM2Q9NT68 2774 aa6.96□□□□□ -1.3
TREM1-206ENST00000589882 FAM229AH3BQW9 127 aa6.95□□□□□ -1.3
TREM1-206ENST00000589882 NOTCH2NLQ7Z3S9 236 aa6.95□□□□□ -1.3
TREM1-206ENST00000589882 LINC00483Q53H64 154 aa6.94□□□□□ -1.3
TREM1-206ENST00000589882 KRTAP13-1Q8IUC0 172 aa6.94□□□□□ -1.3
TREM1-206ENST00000589882 KRTAP11-1Q8IUC1 163 aa6.94□□□□□ -1.3
TREM1-206ENST00000589882 PRKDCP78527 4128 aaKnown RBP6.93□□□□□ -1.3
TREM1-206ENST00000589882 A8MUU9 505 aa6.92□□□□□ -1.3
TREM1-206ENST00000589882 IGKV2-30P06310 120 aa6.92□□□□□ -1.3
TREM1-206ENST00000589882 C14orf177Q52M58 125 aa6.91□□□□□ -1.3
TREM1-206ENST00000589882 TGP01266 2768 aa6.9□□□□□ -1.3
TREM1-206ENST00000589882 IGLV5-52A0A0A0MRZ9 124 aa6.9□□□□□ -1.31
TREM1-206ENST00000589882 CHTF8P0CG12 524 aa6.9□□□□□ -1.31
TREM1-206ENST00000589882 LY6G6CO95867 125 aa6.87□□□□□ -1.31
TREM1-206ENST00000589882 VWFP04275 2813 aa6.86□□□□□ -1.31
TREM1-206ENST00000589882 NOTCH1P46531 2555 aa6.85□□□□□ -1.31
TREM1-206ENST00000589882 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.31
TREM1-206ENST00000589882 WWC2-AS2Q96NR7 200 aa6.84□□□□□ -1.31
TREM1-206ENST00000589882 SPINK6Q6UWN8 80 aa6.82□□□□□ -1.32
TREM1-206ENST00000589882 IGKV2D-30A0A075B6S6 120 aa6.81□□□□□ -1.32
TREM1-206ENST00000589882 P0C880 135 aa6.81□□□□□ -1.32
TREM1-206ENST00000589882 H0YAA0 97 aa6.77□□□□□ -1.33
TREM1-206ENST00000589882 K7ERS5 55 aa6.77□□□□□ -1.33
TREM1-206ENST00000589882 DNAH3Q8TD57 4116 aa6.77□□□□□ -1.33
TREM1-206ENST00000589882 PANO1I0J062 215 aa6.75□□□□□ -1.33
TREM1-206ENST00000589882 Q6ZSA8 131 aa6.74□□□□□ -1.33
TREM1-206ENST00000589882 SRRM2Q9UQ35 2752 aaKnown RBP6.71□□□□□ -1.34
TREM1-206ENST00000589882 A0A1B0GU33 70 aa6.7□□□□□ -1.34
TREM1-206ENST00000589882 NUPR2A6NF83 97 aa6.7□□□□□ -1.34
TREM1-206ENST00000589882 KRTAP10-11P60412 298 aa6.68□□□□□ -1.34
TREM1-206ENST00000589882 KMT2CQ8NEZ4 4911 aaKnown RBP6.68□□□□□ -1.34
TREM1-206ENST00000589882 SPINK1P00995 79 aa6.68□□□□□ -1.34
TREM1-206ENST00000589882 KRTAP1-5Q9BYS1 174 aa6.68□□□□□ -1.34
TREM1-206ENST00000589882 SPACA4Q8TDM5 124 aa6.67□□□□□ -1.34
TREM1-206ENST00000589882 ANAPC11Q9NYG5 84 aa6.67□□□□□ -1.34
TREM1-206ENST00000589882 SSBP3-AS1Q7Z2R9 100 aa6.66□□□□□ -1.34
TREM1-206ENST00000589882 DNAH1Q9P2D7 4330 aa6.66□□□□□ -1.34
TREM1-206ENST00000589882 H1FX-AS1Q4G0G2 97 aa6.66□□□□□ -1.34
TREM1-206ENST00000589882 CIRBP-AS1Q8TBR5 109 aa6.66□□□□□ -1.34
TREM1-206ENST00000589882 SPINT4Q6UDR6 99 aa6.65□□□□□ -1.34
TREM1-206ENST00000589882 PSORS1C2Q9UIG4 136 aa6.65□□□□□ -1.34
TREM1-206ENST00000589882 KRTAP16-1A8MUX0 517 aa6.64□□□□□ -1.35
TREM1-206ENST00000589882 DNAH9Q9NYC9 4486 aa6.63□□□□□ -1.35
TREM1-206ENST00000589882 A0A0A0MQY5 61 aa6.63□□□□□ -1.35
TREM1-206ENST00000589882 RYR3Q15413 4870 aa6.62□□□□□ -1.35
TREM1-206ENST00000589882 C20orf166-AS1Q96NR2 134 aa6.62□□□□□ -1.35
TREM1-206ENST00000589882 UBE2DNLQ8IWF7 75 aa6.61□□□□□ -1.35
TREM1-206ENST00000589882 A0A087WTM6 91 aa6.6□□□□□ -1.35
TREM1-206ENST00000589882 COL7A1Q02388 2944 aa6.59□□□□□ -1.35
TREM1-206ENST00000589882 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.35
TREM1-206ENST00000589882 CRIPTQ9P021 101 aa6.58□□□□□ -1.36
TREM1-206ENST00000589882 NDUFAF8A1L188 74 aa6.57□□□□□ -1.36
TREM1-206ENST00000589882 TENM3Q9P273 2699 aa6.57□□□□□ -1.36
TREM1-206ENST00000589882 TYMSOSQ8TAI1 123 aa6.56□□□□□ -1.36
TREM1-206ENST00000589882 Q8N1X5 172 aa6.56□□□□□ -1.36
TREM1-206ENST00000589882 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
TREM1-206ENST00000589882 DNAH7Q8WXX0 4024 aa6.53□□□□□ -1.36
TREM1-206ENST00000589882 DYNC2H1Q8NCM8 4307 aaKnown RBP6.52□□□□□ -1.37
TREM1-206ENST00000589882 STAB2Q8WWQ8 2551 aa6.48□□□□□ -1.37
TREM1-206ENST00000589882 HUWE1Q7Z6Z7 4374 aaKnown RBP6.47□□□□□ -1.37
TREM1-206ENST00000589882 SACSQ9NZJ4 4579 aa6.47□□□□□ -1.37
TREM1-206ENST00000589882 NBDYA0A0U1RRE5 68 aa6.47□□□□□ -1.37
TREM1-206ENST00000589882 LCE2BO14633 110 aa6.46□□□□□ -1.38
TREM1-206ENST00000589882 Q6ZRN7 208 aaPredicted RBP6.46□□□□□ -1.38
TREM1-206ENST00000589882 RYR2Q92736 4967 aa6.46□□□□□ -1.38
TREM1-206ENST00000589882 LYSTQ99698 3801 aa6.45□□□□□ -1.38
TREM1-206ENST00000589882 APLNQ9ULZ1 77 aa6.45□□□□□ -1.38
TREM1-206ENST00000589882 RPL37P61927 97 aaKnown RBP6.44□□□□□ -1.38
TREM1-206ENST00000589882 TPRXLQ17RH7 258 aa6.44□□□□□ -1.38
TREM1-206ENST00000589882 COX6B2Q6YFQ2 88 aa6.43□□□□□ -1.38
TREM1-206ENST00000589882 STARD9Q9P2P6 4700 aa6.4□□□□□ -1.39
TREM1-206ENST00000589882 CSMD3Q7Z407 3707 aa6.4□□□□□ -1.39
TREM1-206ENST00000589882 EPPK1P58107 5090 aaKnown RBP6.39□□□□□ -1.39
TREM1-206ENST00000589882 BIRC6Q9NR09 4857 aa6.37□□□□□ -1.39
TREM1-206ENST00000589882 FLG2Q5D862 2391 aaPredicted RBP6.36□□□□□ -1.39
TREM1-206ENST00000589882 KRTAP13-2Q52LG2 175 aa6.34□□□□□ -1.39
TREM1-206ENST00000589882 DNAH10Q8IVF4 4471 aa6.33□□□□□ -1.4
TREM1-206ENST00000589882 PLECQ15149 4684 aaKnown RBP6.32□□□□□ -1.4
TREM1-206ENST00000589882 LUZP6Q538Z0 58 aa6.31□□□□□ -1.4
TREM1-206ENST00000589882 HYDINQ4G0P3 5121 aa6.31□□□□□ -1.4
TREM1-206ENST00000589882 KRTAP3-1Q9BYR8 98 aa6.3□□□□□ -1.4
TREM1-206ENST00000589882 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
TREM1-206ENST00000589882 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
TREM1-206ENST00000589882 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
TREM1-206ENST00000589882 DNAH8Q96JB1 4490 aa6.25□□□□□ -1.41
TREM1-206ENST00000589882 FRAS1Q86XX4 4008 aa6.22□□□□□ -1.41
TREM1-206ENST00000589882 A0A0D9SG42 100 aa6.21□□□□□ -1.42
TREM1-206ENST00000589882 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
TREM1-206ENST00000589882 KMT2AQ03164 3969 aa6.18□□□□□ -1.42
TREM1-206ENST00000589882 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
TREM1-206ENST00000589882 S4R3F8 94 aa6.17□□□□□ -1.42
TREM1-206ENST00000589882 KRTAP13-4Q3LI77 160 aa6.15□□□□□ -1.42
TREM1-206ENST00000589882 KRTAP1-4P0C5Y4 121 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms