RNA–Protein interactions for RNA: ENST00000589550.1

PIK3C3-211, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3

Gene PIK3C3, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-211ENST00000589550 TEX15Q9BXT5 2789 aa1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 A0A1B0GU69 56 aa1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 H0YGX0 51 aa1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 PRB3Q04118 309 aaPredicted RBP1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 RPL39P5Q59GN2 51 aa1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 Q6ZRX8 168 aa1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 USMG5Q96IX5 58 aa1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 CNFNQ9BYD5 112 aa1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 LRRK2Q5S007 2527 aa1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 ANKHD1Q8IWZ3 2542 aaKnown RBP1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 HRNRQ86YZ3 2850 aaPredicted RBP1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 CSMD1Q96PZ7 3565 aa1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 UNC79Q9P2D8 2635 aa1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 HECTD1Q9ULT8 2610 aa1.35□□□□□ -2.19
PIK3C3-211ENST00000589550 PDZD2O15018 2839 aa1.34□□□□□ -2.19
PIK3C3-211ENST00000589550 USP9XQ93008 2570 aaPredicted RBP1.34□□□□□ -2.19
PIK3C3-211ENST00000589550 NIPBLQ6KC79 2804 aaeCLIP1.34□□□□□ -2.19
PIK3C3-211ENST00000589550 H3BUA1 57 aa1.34□□□□□ -2.19
PIK3C3-211ENST00000589550 TMEM167AQ8TBQ9 72 aa1.34□□□□□ -2.19
PIK3C3-211ENST00000589550 LINC00308Q8TCZ7 52 aa1.34□□□□□ -2.19
PIK3C3-211ENST00000589550 SMIM2Q9BVW6 85 aa1.34□□□□□ -2.19
PIK3C3-211ENST00000589550 SETXQ7Z333 2677 aaKnown RBP1.34□□□□□ -2.2
PIK3C3-211ENST00000589550 NAV2Q8IVL1 2488 aa1.33□□□□□ -2.2
PIK3C3-211ENST00000589550 NBASA2RRP1 2371 aa1.33□□□□□ -2.2
PIK3C3-211ENST00000589550 HIVEP3Q5T1R4 2406 aa1.33□□□□□ -2.2
PIK3C3-211ENST00000589550 G3V318 75 aa1.33□□□□□ -2.2
PIK3C3-211ENST00000589550 APELAP0DMC3 54 aa1.33□□□□□ -2.2
PIK3C3-211ENST00000589550 PRCDQ00LT1 54 aa1.33□□□□□ -2.2
PIK3C3-211ENST00000589550 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
PIK3C3-211ENST00000589550 ITPR2Q14571 2701 aa1.33□□□□□ -2.2
PIK3C3-211ENST00000589550 DOPEY2Q9Y3R5 2298 aa1.33□□□□□ -2.2
PIK3C3-211ENST00000589550 FLNBO75369 2602 aaKnown RBP1.33□□□□□ -2.2
PIK3C3-211ENST00000589550 VPS13CQ709C8 3753 aa1.32□□□□□ -2.2
PIK3C3-211ENST00000589550 FASNP49327 2511 aaKnown RBP1.32□□□□□ -2.2
PIK3C3-211ENST00000589550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.32□□□□□ -2.2
PIK3C3-211ENST00000589550 ITPR3Q14573 2671 aa1.32□□□□□ -2.2
PIK3C3-211ENST00000589550 NDUFA1O15239 70 aa1.32□□□□□ -2.2
PIK3C3-211ENST00000589550 LINC00158P58513 81 aa1.32□□□□□ -2.2
PIK3C3-211ENST00000589550 PTPN13Q12923 2485 aa1.32□□□□□ -2.2
PIK3C3-211ENST00000589550 SPTAN1Q13813 2472 aaKnown RBP1.32□□□□□ -2.2
PIK3C3-211ENST00000589550 PCNX1Q96RV3 2341 aa1.32□□□□□ -2.2
PIK3C3-211ENST00000589550 SPTBN1Q01082 2364 aaKnown RBP1.32□□□□□ -2.2
PIK3C3-211ENST00000589550 AKAP9Q99996 3911 aa1.31□□□□□ -2.2
PIK3C3-211ENST00000589550 ABCA12Q86UK0 2595 aa1.31□□□□□ -2.2
PIK3C3-211ENST00000589550 PKDREJQ9NTG1 2253 aa1.31□□□□□ -2.2
PIK3C3-211ENST00000589550 WT1-ASQ06250 92 aa1.31□□□□□ -2.2
PIK3C3-211ENST00000589550 COX17Q14061 63 aa1.31□□□□□ -2.2
PIK3C3-211ENST00000589550 MYO9AB2RTY4 2548 aa1.31□□□□□ -2.2
PIK3C3-211ENST00000589550 USF3Q68DE3 2245 aa1.31□□□□□ -2.2
PIK3C3-211ENST00000589550 NF1P21359 2839 aa1.3□□□□□ -2.2
PIK3C3-211ENST00000589550 MXRA5Q9NR99 2828 aa1.3□□□□□ -2.2
PIK3C3-211ENST00000589550 CREBBPQ92793 2442 aa1.3□□□□□ -2.2
PIK3C3-211ENST00000589550 POLQO75417 2590 aa1.3□□□□□ -2.2
PIK3C3-211ENST00000589550 HIVEP1P15822 2718 aa1.3□□□□□ -2.2
PIK3C3-211ENST00000589550 I3L2K1 104 aa1.3□□□□□ -2.2
PIK3C3-211ENST00000589550 DEFB136Q30KP8 78 aa1.3□□□□□ -2.2
PIK3C3-211ENST00000589550 CRIPTQ9P021 101 aa1.3□□□□□ -2.2
PIK3C3-211ENST00000589550 CDKN2A-AS1Q9UH64 79 aa1.3□□□□□ -2.2
PIK3C3-211ENST00000589550 FCGBPQ9Y6R7 5405 aaPredicted RBP1.3□□□□□ -2.2
PIK3C3-211ENST00000589550 FLNAP21333 2647 aaKnown RBP1.29□□□□□ -2.2
PIK3C3-211ENST00000589550 ZANQ9Y493 2812 aa1.29□□□□□ -2.2
PIK3C3-211ENST00000589550 DEFB131BA0A096LNP1 70 aa1.29□□□□□ -2.2
PIK3C3-211ENST00000589550 K7EIM0 57 aa1.29□□□□□ -2.2
PIK3C3-211ENST00000589550 RHPN1-AS1Q9BWJ2 59 aa1.29□□□□□ -2.2
PIK3C3-211ENST00000589550 SPG11Q96JI7 2443 aa1.29□□□□□ -2.2
PIK3C3-211ENST00000589550 CCDC168Q8NDH2 2452 aa1.29□□□□□ -2.2
PIK3C3-211ENST00000589550 SVEP1Q4LDE5 3571 aa1.29□□□□□ -2.2
PIK3C3-211ENST00000589550 MAST4O15021 2626 aa1.29□□□□□ -2.2
PIK3C3-211ENST00000589550 NBPF19A0A087WUL8 3843 aa1.28□□□□□ -2.2
PIK3C3-211ENST00000589550 DEFB131AP59861 70 aa1.28□□□□□ -2.2
PIK3C3-211ENST00000589550 KLK9Q2XQG4 91 aa1.28□□□□□ -2.2
PIK3C3-211ENST00000589550 SSBP3-AS1Q7Z2R9 100 aa1.28□□□□□ -2.2
PIK3C3-211ENST00000589550 Q8IZM0 81 aa1.28□□□□□ -2.2
PIK3C3-211ENST00000589550 PLCE1Q9P212 2302 aa1.28□□□□□ -2.2
PIK3C3-211ENST00000589550 HTN1P15515 57 aa1.27□□□□□ -2.21
PIK3C3-211ENST00000589550 RPL39P62891 51 aaKnown RBP1.27□□□□□ -2.21
PIK3C3-211ENST00000589550 RPL39LQ96EH5 51 aaKnown RBP1.27□□□□□ -2.21
PIK3C3-211ENST00000589550 AKAP6Q13023 2319 aa1.27□□□□□ -2.21
PIK3C3-211ENST00000589550 ZNF469Q96JG9 3925 aaPredicted RBP1.26□□□□□ -2.21
PIK3C3-211ENST00000589550 POLR2KP53803 58 aaKnown RBP1.26□□□□□ -2.21
PIK3C3-211ENST00000589550 CUBNO60494 3623 aa1.26□□□□□ -2.21
PIK3C3-211ENST00000589550 NSD1Q96L73 2696 aaPredicted RBP1.26□□□□□ -2.21
PIK3C3-211ENST00000589550 SETD2Q9BYW2 2564 aaPredicted RBP1.26□□□□□ -2.21
PIK3C3-211ENST00000589550 NAV3Q8IVL0 2385 aa1.26□□□□□ -2.21
PIK3C3-211ENST00000589550 ABCA2Q9BZC7 2435 aa1.25□□□□□ -2.21
PIK3C3-211ENST00000589550 F8P00451 2351 aa1.25□□□□□ -2.21
PIK3C3-211ENST00000589550 H0YAA0 97 aa1.25□□□□□ -2.21
PIK3C3-211ENST00000589550 K7EQZ3 153 aa1.25□□□□□ -2.21
PIK3C3-211ENST00000589550 SPART-AS1P0CW21 52 aa1.25□□□□□ -2.21
PIK3C3-211ENST00000589550 DEFB135Q30KP9 77 aa1.25□□□□□ -2.21
PIK3C3-211ENST00000589550 CSPG4Q6UVK1 2322 aa1.24□□□□□ -2.21
PIK3C3-211ENST00000589550 ACANP16112 2415 aa1.24□□□□□ -2.21
PIK3C3-211ENST00000589550 DEFB130BP0DP73 79 aa1.24□□□□□ -2.21
PIK3C3-211ENST00000589550 DEFB130AP0DP74 79 aa1.24□□□□□ -2.21
PIK3C3-211ENST00000589550 HTN3P15516 51 aa1.24□□□□□ -2.21
PIK3C3-211ENST00000589550 TEP1Q99973 2627 aaKnown RBP1.24□□□□□ -2.21
PIK3C3-211ENST00000589550 WNK2Q9Y3S1 2297 aa1.23□□□□□ -2.21
PIK3C3-211ENST00000589550 JMJD1CQ15652 2540 aa1.23□□□□□ -2.21
PIK3C3-211ENST00000589550 TENM1Q9UKZ4 2725 aa1.23□□□□□ -2.21
PIK3C3-211ENST00000589550 DEFB4AO15263 64 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms