RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 Q6ZVQ6 151 aa8.95□□□□□ -0.98
ATG4D-205ENST00000586477 LINC00846Q9NV44 126 aa8.95□□□□□ -0.98
ATG4D-205ENST00000586477 CDIP1Q9H305 208 aa8.94□□□□□ -0.98
ATG4D-205ENST00000586477 BPY2O14599 106 aa8.92□□□□□ -0.98
ATG4D-205ENST00000586477 DEFB116Q30KQ4 102 aa8.9□□□□□ -0.98
ATG4D-205ENST00000586477 KRTAP13-3Q3SY46 172 aa8.9□□□□□ -0.98
ATG4D-205ENST00000586477 A8MWP4 228 aa8.89□□□□□ -0.99
ATG4D-205ENST00000586477 K7ERU9 68 aa8.88□□□□□ -0.99
ATG4D-205ENST00000586477 A0A1B0GVX0 72 aa8.87□□□□□ -0.99
ATG4D-205ENST00000586477 C8orf87E5RJ46 101 aa8.86□□□□□ -0.99
ATG4D-205ENST00000586477 CXCL6P80162 114 aa8.85□□□□□ -0.99
ATG4D-205ENST00000586477 ATP5EP2Q5VTU8 51 aa8.85□□□□□ -0.99
ATG4D-205ENST00000586477 IGHV6-1A0A0B4J1U7 121 aa8.84□□□□□ -0.99
ATG4D-205ENST00000586477 LINC00313P59037 77 aa8.83□□□□□ -1
ATG4D-205ENST00000586477 C9orf92A6NGG3 77 aa8.82□□□□□ -1
ATG4D-205ENST00000586477 PRR15Q8IV56 129 aa8.82□□□□□ -1
ATG4D-205ENST00000586477 DSCR10P59022 87 aa8.81□□□□□ -1
ATG4D-205ENST00000586477 IGKV3D-7A0A0C4DH55 119 aa8.8□□□□□ -1
ATG4D-205ENST00000586477 LINC00643Q86TS7 51 aa8.8□□□□□ -1
ATG4D-205ENST00000586477 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
ATG4D-205ENST00000586477 K7EQZ3 153 aa8.77□□□□□ -1.01
ATG4D-205ENST00000586477 XP32Q5T750 250 aa8.77□□□□□ -1.01
ATG4D-205ENST00000586477 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1.01
ATG4D-205ENST00000586477 C8orf17Q9NRJ1 99 aa8.76□□□□□ -1.01
ATG4D-205ENST00000586477 KRTAP9-2Q9BYQ4 174 aa8.74□□□□□ -1.01
ATG4D-205ENST00000586477 Q75L30 129 aa8.72□□□□□ -1.01
ATG4D-205ENST00000586477 SEC61BP60468 96 aaKnown RBP8.71□□□□□ -1.02
ATG4D-205ENST00000586477 Q8N9L7 120 aa8.7□□□□□ -1.02
ATG4D-205ENST00000586477 C20orf166-AS1Q96NR2 134 aa8.7□□□□□ -1.02
ATG4D-205ENST00000586477 MMP24-AS1A0A0U1RRL7 71 aa8.69□□□□□ -1.02
ATG4D-205ENST00000586477 hDV103S1A0JD37 113 aa8.69□□□□□ -1.02
ATG4D-205ENST00000586477 RPL37P61927 97 aaKnown RBP8.69□□□□□ -1.02
ATG4D-205ENST00000586477 NOTCH2NLQ7Z3S9 236 aa8.69□□□□□ -1.02
ATG4D-205ENST00000586477 TMEM254Q8TBM7 123 aa8.69□□□□□ -1.02
ATG4D-205ENST00000586477 KRTAP16-1A8MUX0 517 aa8.68□□□□□ -1.02
ATG4D-205ENST00000586477 A8MUU9 505 aa8.67□□□□□ -1.02
ATG4D-205ENST00000586477 HCG22E2RYF7 251 aa8.67□□□□□ -1.02
ATG4D-205ENST00000586477 CASC2Q6XLA1 102 aa8.67□□□□□ -1.02
ATG4D-205ENST00000586477 HIST1H4AP62805 103 aaKnown RBP8.66□□□□□ -1.02
ATG4D-205ENST00000586477 MRPL34Q9BQ48 92 aaKnown RBP8.66□□□□□ -1.02
ATG4D-205ENST00000586477 ATP11AUNQ6ZP68 121 aa8.65□□□□□ -1.02
ATG4D-205ENST00000586477 Q8N9P0 234 aaPredicted RBP8.64□□□□□ -1.03
ATG4D-205ENST00000586477 WFDC13Q8IUB5 93 aa8.62□□□□□ -1.03
ATG4D-205ENST00000586477 IMUPQ9GZP8 106 aa8.6□□□□□ -1.03
ATG4D-205ENST00000586477 PCP4P48539 62 aa8.59□□□□□ -1.03
ATG4D-205ENST00000586477 NDUFS5O43920 106 aa8.58□□□□□ -1.04
ATG4D-205ENST00000586477 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
ATG4D-205ENST00000586477 KRTAP19-2Q3LHN2 52 aa8.54□□□□□ -1.04
ATG4D-205ENST00000586477 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
ATG4D-205ENST00000586477 TP53AIP1Q9HCN2 124 aa8.54□□□□□ -1.04
ATG4D-205ENST00000586477 ZCCHC13Q8WW36 166 aaKnown RBP8.53□□□□□ -1.04
ATG4D-205ENST00000586477 A0A087WVE0 104 aa8.51□□□□□ -1.05
ATG4D-205ENST00000586477 KRTAP9-6A0A140TA67 174 aa8.5□□□□□ -1.05
ATG4D-205ENST00000586477 MT-ATP8P03928 68 aa8.5□□□□□ -1.05
ATG4D-205ENST00000586477 SCGB1A1P11684 91 aa8.44□□□□□ -1.06
ATG4D-205ENST00000586477 FLGP20930 4061 aaPredicted RBP8.41□□□□□ -1.06
ATG4D-205ENST00000586477 UQCRQO14949 82 aa8.41□□□□□ -1.06
ATG4D-205ENST00000586477 MT1HP80294 61 aa8.38□□□□□ -1.07
ATG4D-205ENST00000586477 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
ATG4D-205ENST00000586477 SMIM20Q8N5G0 67 aa8.38□□□□□ -1.07
ATG4D-205ENST00000586477 TRAV22A0A0B4J277 110 aa8.37□□□□□ -1.07
ATG4D-205ENST00000586477 FAM236AA0A1B0GUQ0 79 aa8.36□□□□□ -1.07
ATG4D-205ENST00000586477 FAM236BA0A1B0GV22 79 aa8.36□□□□□ -1.07
ATG4D-205ENST00000586477 ATOX1O00244 68 aa8.36□□□□□ -1.07
ATG4D-205ENST00000586477 Q5W150 140 aa8.36□□□□□ -1.07
ATG4D-205ENST00000586477 SPINK7P58062 85 aa8.34□□□□□ -1.07
ATG4D-205ENST00000586477 C7orf65Q6ZTY9 151 aa8.34□□□□□ -1.07
ATG4D-205ENST00000586477 OCR1Q9BZK8 76 aa8.34□□□□□ -1.07
ATG4D-205ENST00000586477 MP68P56378 58 aa8.31□□□□□ -1.08
ATG4D-205ENST00000586477 C5orf47Q569G3 176 aa8.31□□□□□ -1.08
ATG4D-205ENST00000586477 IGKV2D-30A0A075B6S6 120 aa8.29□□□□□ -1.08
ATG4D-205ENST00000586477 LOC101927531A0A1B0GV80 90 aa8.29□□□□□ -1.08
ATG4D-205ENST00000586477 H0Y9P7 68 aa8.29□□□□□ -1.08
ATG4D-205ENST00000586477 IGKV2-30P06310 120 aa8.29□□□□□ -1.08
ATG4D-205ENST00000586477 H3BPC8 53 aa8.27□□□□□ -1.09
ATG4D-205ENST00000586477 RBM12B-AS1Q9P1G2 102 aa8.27□□□□□ -1.09
ATG4D-205ENST00000586477 TRAV7A0A075B6U4 112 aa8.26□□□□□ -1.09
ATG4D-205ENST00000586477 FSIP2Q5CZC0 6907 aa8.24□□□□□ -1.09
ATG4D-205ENST00000586477 CRCT1Q9UGL9 99 aa8.24□□□□□ -1.09
ATG4D-205ENST00000586477 LORP23490 312 aaPredicted RBP8.23□□□□□ -1.09
ATG4D-205ENST00000586477 COX6B2Q6YFQ2 88 aa8.22□□□□□ -1.09
ATG4D-205ENST00000586477 M0R2T5 61 aa8.21□□□□□ -1.1
ATG4D-205ENST00000586477 HRES1P13985 223 aa8.21□□□□□ -1.1
ATG4D-205ENST00000586477 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.1
ATG4D-205ENST00000586477 C1orf64Q8NEQ6 169 aa8.21□□□□□ -1.1
ATG4D-205ENST00000586477 LINC00208Q96KT6 92 aa8.2□□□□□ -1.1
ATG4D-205ENST00000586477 CYP4F30PQ9H0H9 118 aa8.19□□□□□ -1.1
ATG4D-205ENST00000586477 FAM236DA0A1B0GTK5 79 aa8.18□□□□□ -1.1
ATG4D-205ENST00000586477 FAM236CP0DP71 79 aa8.18□□□□□ -1.1
ATG4D-205ENST00000586477 SERP2Q8N6R1 65 aa8.17□□□□□ -1.1
ATG4D-205ENST00000586477 MPLKIPQ8TAP9 179 aa8.17□□□□□ -1.1
ATG4D-205ENST00000586477 SVIPQ8NHG7 77 aa8.1□□□□□ -1.11
ATG4D-205ENST00000586477 C4orf26Q17RF5 130 aa8.08□□□□□ -1.12
ATG4D-205ENST00000586477 ANAPC13Q9BS18 74 aa8.06□□□□□ -1.12
ATG4D-205ENST00000586477 COX7CP15954 63 aa8.05□□□□□ -1.12
ATG4D-205ENST00000586477 C20orf197Q8N268 126 aa8.03□□□□□ -1.12
ATG4D-205ENST00000586477 H1FX-AS1Q4G0G2 97 aa8.01□□□□□ -1.13
ATG4D-205ENST00000586477 KLKP1Q107X0 134 aa8□□□□□ -1.13
ATG4D-205ENST00000586477 A8MUN3 132 aa7.99□□□□□ -1.13
ATG4D-205ENST00000586477 SNURFQ9Y675 71 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms