RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
TOP3A-214ENST00000582981 TP53AIP1Q9HCN2 124 aa6.35□□□□□ -1.39
TOP3A-214ENST00000582981 MEGF8Q7Z7M0 2845 aa6.34□□□□□ -1.39
TOP3A-214ENST00000582981 APLNQ9ULZ1 77 aa6.33□□□□□ -1.4
TOP3A-214ENST00000582981 DNAH8Q96JB1 4490 aa6.33□□□□□ -1.4
TOP3A-214ENST00000582981 A0A087X002 238 aa6.33□□□□□ -1.4
TOP3A-214ENST00000582981 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
TOP3A-214ENST00000582981 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
TOP3A-214ENST00000582981 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
TOP3A-214ENST00000582981 C8orf17Q9NRJ1 99 aa6.32□□□□□ -1.4
TOP3A-214ENST00000582981 CSAG1Q6PB30 78 aa6.31□□□□□ -1.4
TOP3A-214ENST00000582981 CDK2AP2O75956 126 aa6.31□□□□□ -1.4
TOP3A-214ENST00000582981 A0A1B0GU69 56 aa6.3□□□□□ -1.4
TOP3A-214ENST00000582981 PRKDCP78527 4128 aaKnown RBP6.3□□□□□ -1.4
TOP3A-214ENST00000582981 Q6ZR54 194 aa6.29□□□□□ -1.4
TOP3A-214ENST00000582981 NBDYA0A0U1RRE5 68 aa6.29□□□□□ -1.4
TOP3A-214ENST00000582981 DNAH17Q9UFH2 4485 aa6.28□□□□□ -1.4
TOP3A-214ENST00000582981 DNAH2Q9P225 4427 aa6.27□□□□□ -1.41
TOP3A-214ENST00000582981 Q96NJ1 140 aa6.27□□□□□ -1.41
TOP3A-214ENST00000582981 C14orf177Q52M58 125 aa6.26□□□□□ -1.41
TOP3A-214ENST00000582981 ACYP2P14621 99 aa6.26□□□□□ -1.41
TOP3A-214ENST00000582981 SPRR1BP22528 89 aa6.26□□□□□ -1.41
TOP3A-214ENST00000582981 MRPL34Q9BQ48 92 aaKnown RBP6.26□□□□□ -1.41
TOP3A-214ENST00000582981 HECTD4Q9Y4D8 3996 aa6.26□□□□□ -1.41
TOP3A-214ENST00000582981 PSORS1C2Q9UIG4 136 aa6.25□□□□□ -1.41
TOP3A-214ENST00000582981 RTL8CO15255 209 aa6.25□□□□□ -1.41
TOP3A-214ENST00000582981 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
TOP3A-214ENST00000582981 DNHD1Q96M86 4753 aa6.25□□□□□ -1.41
TOP3A-214ENST00000582981 KRTAP13-1Q8IUC0 172 aa6.24□□□□□ -1.41
TOP3A-214ENST00000582981 A0A1B0GVX0 72 aa6.23□□□□□ -1.41
TOP3A-214ENST00000582981 Q6ZRN7 208 aaPredicted RBP6.23□□□□□ -1.41
TOP3A-214ENST00000582981 VPS13DQ5THJ4 4388 aa6.23□□□□□ -1.41
TOP3A-214ENST00000582981 DNAH6Q9C0G6 4158 aa6.23□□□□□ -1.41
TOP3A-214ENST00000582981 CIRBP-AS1Q8TBR5 109 aa6.23□□□□□ -1.41
TOP3A-214ENST00000582981 Q5W150 140 aa6.22□□□□□ -1.41
TOP3A-214ENST00000582981 SPACA4Q8TDM5 124 aa6.22□□□□□ -1.41
TOP3A-214ENST00000582981 DNAH11Q96DT5 4516 aa6.22□□□□□ -1.41
TOP3A-214ENST00000582981 UQCR11O14957 56 aa6.21□□□□□ -1.42
TOP3A-214ENST00000582981 WWC2-AS2Q96NR7 200 aa6.21□□□□□ -1.42
TOP3A-214ENST00000582981 ASB16-AS1Q495Z4 193 aa6.2□□□□□ -1.42
TOP3A-214ENST00000582981 SPATA8Q6RVD6 105 aa6.2□□□□□ -1.42
TOP3A-214ENST00000582981 A0A087WTM6 91 aa6.2□□□□□ -1.42
TOP3A-214ENST00000582981 ZNF706Q9Y5V0 76 aaPredicted RBP6.18□□□□□ -1.42
TOP3A-214ENST00000582981 C1orf134Q5TEV5 83 aa6.17□□□□□ -1.42
TOP3A-214ENST00000582981 DYNC2H1Q8NCM8 4307 aaKnown RBP6.16□□□□□ -1.42
TOP3A-214ENST00000582981 FLG2Q5D862 2391 aaPredicted RBP6.16□□□□□ -1.42
TOP3A-214ENST00000582981 IGLV5-52A0A0A0MRZ9 124 aa6.16□□□□□ -1.42
TOP3A-214ENST00000582981 ZNF861PO60384 105 aa6.13□□□□□ -1.43
TOP3A-214ENST00000582981 LRP1BQ9NZR2 4599 aa6.12□□□□□ -1.43
TOP3A-214ENST00000582981 NUPR2A6NF83 97 aa6.12□□□□□ -1.43
TOP3A-214ENST00000582981 DMAC1Q96GE9 116 aa6.12□□□□□ -1.43
TOP3A-214ENST00000582981 LY6G6CO95867 125 aa6.1□□□□□ -1.43
TOP3A-214ENST00000582981 SPINK1P00995 79 aa6.1□□□□□ -1.43
TOP3A-214ENST00000582981 LINC00483Q53H64 154 aa6.1□□□□□ -1.43
TOP3A-214ENST00000582981 DNAH5Q8TE73 4624 aa6.09□□□□□ -1.43
TOP3A-214ENST00000582981 ALMS1Q8TCU4 4167 aa6.09□□□□□ -1.43
TOP3A-214ENST00000582981 KRTAP10-2P60368 255 aa6.06□□□□□ -1.44
TOP3A-214ENST00000582981 IGLV7-43P04211 117 aa6.06□□□□□ -1.44
TOP3A-214ENST00000582981 KRTAP13-3Q3SY46 172 aa6.05□□□□□ -1.44
TOP3A-214ENST00000582981 HYDINQ4G0P3 5121 aa6.04□□□□□ -1.44
TOP3A-214ENST00000582981 IGKV2D-30A0A075B6S6 120 aa6.04□□□□□ -1.44
TOP3A-214ENST00000582981 IGKV2-30P06310 120 aa6.04□□□□□ -1.44
TOP3A-214ENST00000582981 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
TOP3A-214ENST00000582981 ROMO1P60602 79 aa6.03□□□□□ -1.44
TOP3A-214ENST00000582981 FAT2Q9NYQ8 4349 aa6□□□□□ -1.45
TOP3A-214ENST00000582981 FAM229AH3BQW9 127 aa5.99□□□□□ -1.45
TOP3A-214ENST00000582981 VPS13BQ7Z7G8 4022 aa5.99□□□□□ -1.45
TOP3A-214ENST00000582981 KRTAP25-1Q3LHN0 102 aa5.99□□□□□ -1.45
TOP3A-214ENST00000582981 KRTAP13-2Q52LG2 175 aa5.99□□□□□ -1.45
TOP3A-214ENST00000582981 PKHD1P08F94 4074 aa5.94□□□□□ -1.46
TOP3A-214ENST00000582981 KRTAP10-1P60331 282 aa5.94□□□□□ -1.46
TOP3A-214ENST00000582981 Q8N1X5 172 aa5.93□□□□□ -1.46
TOP3A-214ENST00000582981 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
TOP3A-214ENST00000582981 FAT1Q14517 4588 aa5.92□□□□□ -1.46
TOP3A-214ENST00000582981 A8MUU9 505 aa5.91□□□□□ -1.46
TOP3A-214ENST00000582981 SSBP3-AS1Q7Z2R9 100 aa5.91□□□□□ -1.46
TOP3A-214ENST00000582981 DMBT1Q9UGM3 2413 aaPredicted RBP5.9□□□□□ -1.47
TOP3A-214ENST00000582981 H0YAA0 97 aa5.89□□□□□ -1.47
TOP3A-214ENST00000582981 Q6ZSA8 131 aa5.88□□□□□ -1.47
TOP3A-214ENST00000582981 P0C880 135 aa5.87□□□□□ -1.47
TOP3A-214ENST00000582981 PKD1P98161 4303 aa5.86□□□□□ -1.47
TOP3A-214ENST00000582981 SMR3BP02814 79 aaPredicted RBP5.86□□□□□ -1.47
TOP3A-214ENST00000582981 KRTAP16-1A8MUX0 517 aa5.85□□□□□ -1.47
TOP3A-214ENST00000582981 KRTAP1-4P0C5Y4 121 aa5.84□□□□□ -1.47
TOP3A-214ENST00000582981 C9orf92A6NGG3 77 aa5.84□□□□□ -1.47
TOP3A-214ENST00000582981 TYMSOSQ8TAI1 123 aa5.84□□□□□ -1.48
TOP3A-214ENST00000582981 A0A1B0GU33 70 aa5.82□□□□□ -1.48
TOP3A-214ENST00000582981 SPINT4Q6UDR6 99 aa5.82□□□□□ -1.48
TOP3A-214ENST00000582981 K7ERS5 55 aa5.79□□□□□ -1.48
TOP3A-214ENST00000582981 DYNC1H1Q14204 4646 aaKnown RBP5.77□□□□□ -1.49
TOP3A-214ENST00000582981 KRTAP21-3Q3LHN1 58 aa5.76□□□□□ -1.49
TOP3A-214ENST00000582981 MYCBP2O75592 4640 aa5.76□□□□□ -1.49
TOP3A-214ENST00000582981 NDUFAF8A1L188 74 aa5.74□□□□□ -1.49
TOP3A-214ENST00000582981 H1FX-AS1Q4G0G2 97 aa5.73□□□□□ -1.49
TOP3A-214ENST00000582981 SACSQ9NZJ4 4579 aa5.72□□□□□ -1.49
TOP3A-214ENST00000582981 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
TOP3A-214ENST00000582981 A0A0D9SG42 100 aa5.66□□□□□ -1.5
TOP3A-214ENST00000582981 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.51
TOP3A-214ENST00000582981 KMT2CQ8NEZ4 4911 aaKnown RBP5.64□□□□□ -1.51
TOP3A-214ENST00000582981 COX6B2Q6YFQ2 88 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms