RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 H0YAA0 97 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 H3BUT2 72 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 SMIM13P0DJ93 91 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 KRTAP6-2Q3LI66 62 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 BVES-AS1Q5T3Y7 98 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 KCNQ1DNQ9H478 68 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 A0A0C4DFX4 3053 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 TOGARAM1Q9Y4F4 1720 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 IQGAP3Q86VI3 1631 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 ACACBO00763 2458 aa-0.13□□□□□ -2.43
SMCHD1-206ENST00000581631 LAMA5O15230 3695 aa-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 MGAM2Q2M2H8 2515 aa-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 TLN2Q9Y4G6 2542 aa-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 USP9YO00507 2555 aaPredicted RBP-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 MT1AP04731 61 aa-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 IAPPP10997 89 aa-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 PRLHP81277 87 aa-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 C18orf32Q8TCD1 76 aa-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 PKHD1L1Q86WI1 4243 aa-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 RANBP2P49792 3224 aaKnown RBP-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 ANK3Q12955 4377 aaKnown RBP-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 VPS13DQ5THJ4 4388 aa-0.14□□□□□ -2.43
SMCHD1-206ENST00000581631 SPENQ96T58 3664 aaKnown RBP-0.15□□□□□ -2.43
SMCHD1-206ENST00000581631 CDC42BPAQ5VT25 1732 aa-0.15□□□□□ -2.43
SMCHD1-206ENST00000581631 ABCA9Q8IUA7 1624 aa-0.15□□□□□ -2.43
SMCHD1-206ENST00000581631 H3BNG1 76 aa-0.15□□□□□ -2.43
SMCHD1-206ENST00000581631 DEFB114Q30KQ6 69 aa-0.15□□□□□ -2.43
SMCHD1-206ENST00000581631 SPRR2FQ96RM1 72 aa-0.15□□□□□ -2.43
SMCHD1-206ENST00000581631 A0A1B0GUL6 1792 aa-0.15□□□□□ -2.43
SMCHD1-206ENST00000581631 FRYQ5TBA9 3013 aa-0.15□□□□□ -2.43
SMCHD1-206ENST00000581631 DNAH11Q96DT5 4516 aa-0.15□□□□□ -2.43
SMCHD1-206ENST00000581631 LY75O60449 1722 aa-0.16□□□□□ -2.43
SMCHD1-206ENST00000581631 USP9XQ93008 2570 aaPredicted RBP-0.16□□□□□ -2.43
SMCHD1-206ENST00000581631 UGGT2Q9NYU1 1516 aa-0.16□□□□□ -2.43
SMCHD1-206ENST00000581631 COL12A1Q99715 3063 aa-0.16□□□□□ -2.44
SMCHD1-206ENST00000581631 WDR87Q6ZQQ6 2873 aa-0.16□□□□□ -2.44
SMCHD1-206ENST00000581631 DEFB130BP0DP73 79 aa-0.17□□□□□ -2.44
SMCHD1-206ENST00000581631 DEFB130AP0DP74 79 aa-0.17□□□□□ -2.44
SMCHD1-206ENST00000581631 KRTAP19-8Q3LI54 63 aa-0.17□□□□□ -2.44
SMCHD1-206ENST00000581631 TEX15Q9BXT5 2789 aa-0.17□□□□□ -2.44
SMCHD1-206ENST00000581631 STARD9Q9P2P6 4700 aa-0.17□□□□□ -2.44
SMCHD1-206ENST00000581631 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.17□□□□□ -2.44
SMCHD1-206ENST00000581631 CCDC180Q9P1Z9 1646 aa-0.17□□□□□ -2.44
SMCHD1-206ENST00000581631 CROCC2H7BZ55 1655 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 FAT1Q14517 4588 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 DUOX2Q9NRD8 1548 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 DNMBPQ6XZF7 1577 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 ITPR1Q14643 2758 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 ETDCA0A1B0GVM5 59 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 H3BUA1 57 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 DEFA5Q01523 94 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 ATXN8Q156A1 80 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 DEFB106AQ8N104 65 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 DNAH1Q9P2D7 4330 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 SPTBN5Q9NRC6 3674 aaKnown RBP-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 CLASP1Q7Z460 1538 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 SACSQ9NZJ4 4579 aa-0.18□□□□□ -2.44
SMCHD1-206ENST00000581631 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 APOBP04114 4563 aaKnown RBP-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 HERC2O95714 4834 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 H3BVH4 76 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 PDCD5O14737 125 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 WT1-ASQ06250 92 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 MINOS1Q5TGZ0 78 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 ENHOQ6UWT2 76 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 S4R3F8 94 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 ALS2Q96Q42 1657 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 ABCC6O95255 1503 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 ASXL1Q8IXJ9 1541 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 TRIOO75962 3097 aa-0.19□□□□□ -2.44
SMCHD1-206ENST00000581631 ABCA6Q8N139 1617 aa-0.2□□□□□ -2.44
SMCHD1-206ENST00000581631 K7EMI3 77 aa-0.2□□□□□ -2.44
SMCHD1-206ENST00000581631 SMCO4Q9NRQ5 59 aa-0.2□□□□□ -2.44
SMCHD1-206ENST00000581631 EFCAB5A4FU69 1503 aa-0.2□□□□□ -2.44
SMCHD1-206ENST00000581631 DNAH2Q9P225 4427 aa-0.2□□□□□ -2.44
SMCHD1-206ENST00000581631 TIAM1Q13009 1591 aa-0.2□□□□□ -2.44
SMCHD1-206ENST00000581631 NIPBLQ6KC79 2804 aaeCLIP-0.2□□□□□ -2.445e-6■□□□□ 10.4
SMCHD1-206ENST00000581631 C5orf42Q9H799 3197 aa-0.2□□□□□ -2.44
SMCHD1-206ENST00000581631 SPTAN1Q13813 2472 aaKnown RBP-0.21□□□□□ -2.44
SMCHD1-206ENST00000581631 CELSR3Q9NYQ7 3312 aa-0.21□□□□□ -2.44
SMCHD1-206ENST00000581631 SRCAPQ6ZRS2 3230 aa-0.21□□□□□ -2.44
SMCHD1-206ENST00000581631 CRIP1P50238 77 aa-0.21□□□□□ -2.44
SMCHD1-206ENST00000581631 NOP10Q9NPE3 64 aaKnown RBP-0.21□□□□□ -2.44
SMCHD1-206ENST00000581631 GNG13Q9P2W3 67 aa-0.21□□□□□ -2.44
SMCHD1-206ENST00000581631 C6orf48Q9UBA6 75 aa-0.21□□□□□ -2.44
SMCHD1-206ENST00000581631 FAM208AQ9UK61 1670 aaKnown RBP-0.21□□□□□ -2.44
SMCHD1-206ENST00000581631 LRBAP50851 2863 aa-0.22□□□□□ -2.44
SMCHD1-206ENST00000581631 MMP24-AS1A0A0U1RRL7 71 aa-0.22□□□□□ -2.44
SMCHD1-206ENST00000581631 RPS27P42677 84 aaKnown RBP-0.22□□□□□ -2.44
SMCHD1-206ENST00000581631 SERF2P84101 59 aa-0.22□□□□□ -2.44
SMCHD1-206ENST00000581631 DEFB110Q30KQ9 67 aa-0.22□□□□□ -2.44
SMCHD1-206ENST00000581631 RPS27LQ71UM5 84 aaKnown RBP-0.22□□□□□ -2.44
SMCHD1-206ENST00000581631 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.22□□□□□ -2.44
SMCHD1-206ENST00000581631 DOPEY1Q5JWR5 2465 aa-0.22□□□□□ -2.44
SMCHD1-206ENST00000581631 COL6A5A8TX70 2615 aa-0.22□□□□□ -2.45
SMCHD1-206ENST00000581631 MYO9AB2RTY4 2548 aa-0.23□□□□□ -2.45
SMCHD1-206ENST00000581631 DNAH8Q96JB1 4490 aa-0.23□□□□□ -2.45
SMCHD1-206ENST00000581631 PLECQ15149 4684 aaKnown RBP-0.23□□□□□ -2.45
SMCHD1-206ENST00000581631 IGLV5-48A0A075B6I7 105 aa-0.23□□□□□ -2.45
SMCHD1-206ENST00000581631 TNP1P09430 55 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms