RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 SPAG11BQ08648 103 aa2.11□□□□□ -2.07
CDH19-204ENST00000579658 C9orf116Q5BN46 136 aaPredicted RBP2.11□□□□□ -2.07
CDH19-204ENST00000579658 FP248Q71RG6 208 aaPredicted RBP2.11□□□□□ -2.07
CDH19-204ENST00000579658 A0A096LNI7 61 aa2.1□□□□□ -2.07
CDH19-204ENST00000579658 IGKV2-24A0A0C4DH68 120 aa2.1□□□□□ -2.07
CDH19-204ENST00000579658 TRBV7-6A0A0J9YX20 115 aa2.1□□□□□ -2.07
CDH19-204ENST00000579658 CNBPP62633 177 aaKnown RBP2.1□□□□□ -2.07
CDH19-204ENST00000579658 SYCNQ0VAF6 134 aa2.1□□□□□ -2.07
CDH19-204ENST00000579658 MUC2Q02817 5179 aa2.1□□□□□ -2.07
CDH19-204ENST00000579658 CXCL6P80162 114 aa2.1□□□□□ -2.07
CDH19-204ENST00000579658 KTN1-AS1Q86SY8 53 aa2.1□□□□□ -2.07
CDH19-204ENST00000579658 CAMK2N2Q96S95 79 aa2.1□□□□□ -2.07
CDH19-204ENST00000579658 C6orf48Q9UBA6 75 aa2.1□□□□□ -2.07
CDH19-204ENST00000579658 PSORS1C2Q9UIG4 136 aa2.1□□□□□ -2.07
CDH19-204ENST00000579658 TRAV7A0A075B6U4 112 aa2.09□□□□□ -2.07
CDH19-204ENST00000579658 TRBV7-4A0A0J9YYF1 115 aa2.09□□□□□ -2.07
CDH19-204ENST00000579658 MP68P56378 58 aa2.09□□□□□ -2.07
CDH19-204ENST00000579658 KLKP1Q107X0 134 aa2.09□□□□□ -2.07
CDH19-204ENST00000579658 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.09□□□□□ -2.07
CDH19-204ENST00000579658 LINC00474Q9P2X8 69 aa2.09□□□□□ -2.07
CDH19-204ENST00000579658 TRAV23DV6A0A075B6W5 121 aa2.09□□□□□ -2.07
CDH19-204ENST00000579658 A0A1W2PNN7 141 aa2.09□□□□□ -2.07
CDH19-204ENST00000579658 FAM168BA1KXE4 195 aa2.09□□□□□ -2.07
CDH19-204ENST00000579658 Q6ZQY7 126 aa2.09□□□□□ -2.07
CDH19-204ENST00000579658 KRTAP7-1Q8IUC3 87 aa2.09□□□□□ -2.07
CDH19-204ENST00000579658 PRR15Q8IV56 129 aa2.09□□□□□ -2.07
CDH19-204ENST00000579658 A0A087X002 238 aa2.08□□□□□ -2.08
CDH19-204ENST00000579658 IGHV6-1A0A0B4J1U7 121 aa2.08□□□□□ -2.08
CDH19-204ENST00000579658 ELOF1P60002 83 aaKnown RBP2.08□□□□□ -2.08
CDH19-204ENST00000579658 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
CDH19-204ENST00000579658 SPACA4Q8TDM5 124 aa2.08□□□□□ -2.08
CDH19-204ENST00000579658 LAMTOR3Q9UHA4 124 aa2.08□□□□□ -2.08
CDH19-204ENST00000579658 H7BZZ5 65 aa2.08□□□□□ -2.08
CDH19-204ENST00000579658 KRTAP11-1Q8IUC1 163 aa2.08□□□□□ -2.08
CDH19-204ENST00000579658 DIRC1Q969H9 104 aa2.08□□□□□ -2.08
CDH19-204ENST00000579658 SMIM29Q86T20 159 aa2.07□□□□□ -2.08
CDH19-204ENST00000579658 C20orf197Q8N268 126 aa2.07□□□□□ -2.08
CDH19-204ENST00000579658 PLAC8Q9NZF1 115 aa2.07□□□□□ -2.08
CDH19-204ENST00000579658 COX7BP24311 80 aa2.07□□□□□ -2.08
CDH19-204ENST00000579658 PHF5AQ7RTV0 110 aaKnown RBP2.07□□□□□ -2.08
CDH19-204ENST00000579658 XAGE1AQ9HD64 81 aa2.07□□□□□ -2.08
CDH19-204ENST00000579658 A0A1B0GW54 56 aa2.06□□□□□ -2.08
CDH19-204ENST00000579658 ERC2-IT1O76042 136 aa2.06□□□□□ -2.08
CDH19-204ENST00000579658 NDUFC1O43677 76 aa2.06□□□□□ -2.08
CDH19-204ENST00000579658 TLX1NBP0CAT3 122 aa2.06□□□□□ -2.08
CDH19-204ENST00000579658 DHRS4-AS1Q9P1J3 65 aa2.06□□□□□ -2.08
CDH19-204ENST00000579658 SERP1Q9Y6X1 66 aa2.06□□□□□ -2.08
CDH19-204ENST00000579658 IGLV1-50A0A075B6I6 118 aa2.05□□□□□ -2.08
CDH19-204ENST00000579658 IGLV5-48A0A075B6I7 105 aa2.05□□□□□ -2.08
CDH19-204ENST00000579658 KCNQ1DNQ9H478 68 aa2.05□□□□□ -2.08
CDH19-204ENST00000579658 BPY2O14599 106 aa2.04□□□□□ -2.08
CDH19-204ENST00000579658 IGKV4-1P06312 121 aa2.04□□□□□ -2.08
CDH19-204ENST00000579658 ATP5EP56381 51 aaPredicted RBP2.04□□□□□ -2.08
CDH19-204ENST00000579658 PRR4Q16378 134 aa2.04□□□□□ -2.08
CDH19-204ENST00000579658 NREPQ16612 68 aa2.04□□□□□ -2.08
CDH19-204ENST00000579658 OCR1Q9BZK8 76 aa2.04□□□□□ -2.08
CDH19-204ENST00000579658 F8WEM9 126 aa2.04□□□□□ -2.08
CDH19-204ENST00000579658 KRTAP4-16G5E9R7 235 aaPredicted RBP2.04□□□□□ -2.08
CDH19-204ENST00000579658 LINC01554Q52M75 96 aa2.04□□□□□ -2.08
CDH19-204ENST00000579658 NOTCH2NLQ7Z3S9 236 aa2.04□□□□□ -2.08
CDH19-204ENST00000579658 Q8N377 158 aa2.04□□□□□ -2.08
CDH19-204ENST00000579658 TMEM254Q8TBM7 123 aa2.04□□□□□ -2.08
CDH19-204ENST00000579658 SNURFQ9Y675 71 aa2.04□□□□□ -2.08
CDH19-204ENST00000579658 SPRR1AP35321 89 aa2.03□□□□□ -2.08
CDH19-204ENST00000579658 LCA10Q71F78 164 aa2.03□□□□□ -2.08
CDH19-204ENST00000579658 SPRR4Q96PI1 79 aa2.03□□□□□ -2.09
CDH19-204ENST00000579658 C1orf137Q5JT78 98 aa2.02□□□□□ -2.09
CDH19-204ENST00000579658 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
CDH19-204ENST00000579658 Q6ZRX8 168 aa2.02□□□□□ -2.09
CDH19-204ENST00000579658 NKAPP1Q8N9T2 125 aa2.02□□□□□ -2.09
CDH19-204ENST00000579658 A0A1W2PNM2 257 aa2.02□□□□□ -2.09
CDH19-204ENST00000579658 PSPHP1O15172 72 aa2.02□□□□□ -2.09
CDH19-204ENST00000579658 UBE2BP63146 152 aa2.02□□□□□ -2.09
CDH19-204ENST00000579658 FAM229BQ4G0N7 80 aa2.02□□□□□ -2.09
CDH19-204ENST00000579658 Q8NBF4 154 aa2.02□□□□□ -2.09
CDH19-204ENST00000579658 Q9BRP9 147 aa2.02□□□□□ -2.09
CDH19-204ENST00000579658 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
CDH19-204ENST00000579658 MUC17Q685J3 4493 aa2.01□□□□□ -2.09
CDH19-204ENST00000579658 KRTAP10-7P60409 375 aaPredicted RBP2.01□□□□□ -2.09
CDH19-204ENST00000579658 Q8N9L7 120 aa2.01□□□□□ -2.09
CDH19-204ENST00000579658 IGLV7-43P04211 117 aa2.01□□□□□ -2.09
CDH19-204ENST00000579658 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
CDH19-204ENST00000579658 KRTAP16-1A8MUX0 517 aa2□□□□□ -2.09
CDH19-204ENST00000579658 DSCR10P59022 87 aa2□□□□□ -2.09
CDH19-204ENST00000579658 TPRXLQ17RH7 258 aa2□□□□□ -2.09
CDH19-204ENST00000579658 DEFB105AQ8NG35 78 aa2□□□□□ -2.09
CDH19-204ENST00000579658 ZCCHC13Q8WW36 166 aaKnown RBP2□□□□□ -2.09
CDH19-204ENST00000579658 ANAPC11Q9NYG5 84 aa2□□□□□ -2.09
CDH19-204ENST00000579658 IGLV8-61A0A075B6I0 122 aa1.99□□□□□ -2.09
CDH19-204ENST00000579658 ETDCA0A1B0GVM5 59 aa1.99□□□□□ -2.09
CDH19-204ENST00000579658 PRLHP81277 87 aa1.99□□□□□ -2.09
CDH19-204ENST00000579658 HIGD2AQ9BW72 106 aa1.99□□□□□ -2.09
CDH19-204ENST00000579658 C8orf17Q9NRJ1 99 aa1.99□□□□□ -2.09
CDH19-204ENST00000579658 LPAP08519 4548 aa1.99□□□□□ -2.09
CDH19-204ENST00000579658 A6NED7 52 aa1.99□□□□□ -2.09
CDH19-204ENST00000579658 KRTAP1-4P0C5Y4 121 aa1.99□□□□□ -2.09
CDH19-204ENST00000579658 KRTAP15-1Q3LI76 137 aa1.99□□□□□ -2.09
CDH19-204ENST00000579658 KRTAP13-1Q8IUC0 172 aa1.99□□□□□ -2.09
CDH19-204ENST00000579658 ST20-AS1Q8NBB2 130 aa1.99□□□□□ -2.09
CDH19-204ENST00000579658 A6NN06 94 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms