RNA–Protein interactions for RNA: ENST00000578966.1

RPL17-203, Transcript of ribosomal protein L17, humanhuman

TSL 1 (best)

Gene RPL17, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-203ENST00000578966 CHD7Q9P2D1 2997 aa0.99□□□□□ -2.25
RPL17-203ENST00000578966 SPTBN1Q01082 2364 aaKnown RBP0.99□□□□□ -2.25
RPL17-203ENST00000578966 UBE2DNLQ8IWF7 75 aa0.99□□□□□ -2.25
RPL17-203ENST00000578966 OTOGQ6ZRI0 2925 aa0.99□□□□□ -2.25
RPL17-203ENST00000578966 MAP1BP46821 2468 aaKnown RBP0.99□□□□□ -2.25
RPL17-203ENST00000578966 SPEGQ15772 3267 aa0.99□□□□□ -2.25
RPL17-203ENST00000578966 AKAP13Q12802 2813 aa0.99□□□□□ -2.25
RPL17-203ENST00000578966 ACACBO00763 2458 aa0.98□□□□□ -2.25
RPL17-203ENST00000578966 MAP1AP78559 2803 aaPredicted RBP0.98□□□□□ -2.25
RPL17-203ENST00000578966 VPS13AQ96RL7 3174 aa0.98□□□□□ -2.25
RPL17-203ENST00000578966 ITPR3Q14573 2671 aa0.98□□□□□ -2.25
RPL17-203ENST00000578966 KALRNO60229 2985 aa0.98□□□□□ -2.25
RPL17-203ENST00000578966 DEFB136Q30KP8 78 aa0.98□□□□□ -2.25
RPL17-203ENST00000578966 LINC01556Q5JQF7 62 aa0.98□□□□□ -2.25
RPL17-203ENST00000578966 FLG2Q5D862 2391 aaPredicted RBP0.97□□□□□ -2.25
RPL17-203ENST00000578966 CDH23Q9H251 3354 aa0.97□□□□□ -2.25
RPL17-203ENST00000578966 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.97□□□□□ -2.251e-8■■■■□ 24.5
RPL17-203ENST00000578966 ABCA12Q86UK0 2595 aa0.97□□□□□ -2.25
RPL17-203ENST00000578966 TRIOO75962 3097 aa0.97□□□□□ -2.25
RPL17-203ENST00000578966 A0A096LPF7 62 aa0.97□□□□□ -2.25
RPL17-203ENST00000578966 PRLHP81277 87 aa0.97□□□□□ -2.25
RPL17-203ENST00000578966 DEFB124Q8NES8 71 aa0.97□□□□□ -2.25
RPL17-203ENST00000578966 RELNP78509 3460 aa0.97□□□□□ -2.25
RPL17-203ENST00000578966 TECTAO75443 2155 aa0.97□□□□□ -2.25
RPL17-203ENST00000578966 SPTBN2O15020 2390 aa0.97□□□□□ -2.25
RPL17-203ENST00000578966 MYO15AQ9UKN7 3530 aa0.97□□□□□ -2.25
RPL17-203ENST00000578966 SMG1Q96Q15 3661 aaKnown RBP0.96□□□□□ -2.26
RPL17-203ENST00000578966 HECTD1Q9ULT8 2610 aa0.96□□□□□ -2.26
RPL17-203ENST00000578966 FRYQ5TBA9 3013 aa0.96□□□□□ -2.26
RPL17-203ENST00000578966 C10orf95Q9H7T3 257 aa0.96□□□□□ -2.26
RPL17-203ENST00000578966 S4R3F8 94 aa0.96□□□□□ -2.26
RPL17-203ENST00000578966 COL6A6A6NMZ7 2263 aa0.96□□□□□ -2.26
RPL17-203ENST00000578966 DMDP11532 3685 aa0.96□□□□□ -2.26
RPL17-203ENST00000578966 CNOT1A5YKK6 2376 aaKnown RBP0.96□□□□□ -2.26
RPL17-203ENST00000578966 CELSR3Q9NYQ7 3312 aa0.95□□□□□ -2.26
RPL17-203ENST00000578966 FBN2P35556 2912 aa0.95□□□□□ -2.26
RPL17-203ENST00000578966 SETD2Q9BYW2 2564 aaPredicted RBP0.95□□□□□ -2.26
RPL17-203ENST00000578966 CELSR2Q9HCU4 2923 aa0.95□□□□□ -2.26
RPL17-203ENST00000578966 SPINK1P00995 79 aa0.95□□□□□ -2.26
RPL17-203ENST00000578966 SPART-AS1P0CW21 52 aa0.95□□□□□ -2.26
RPL17-203ENST00000578966 NCOR2Q9Y618 2525 aa0.95□□□□□ -2.26
RPL17-203ENST00000578966 CACNA1EQ15878 2313 aa0.95□□□□□ -2.26
RPL17-203ENST00000578966 IGF2RP11717 2491 aa0.95□□□□□ -2.26
RPL17-203ENST00000578966 TEX15Q9BXT5 2789 aa0.95□□□□□ -2.26
RPL17-203ENST00000578966 TENM2Q9NT68 2774 aa0.95□□□□□ -2.26
RPL17-203ENST00000578966 ABCA2Q9BZC7 2435 aa0.95□□□□□ -2.26
RPL17-203ENST00000578966 FAM186AA6NE01 2351 aa0.94□□□□□ -2.26
RPL17-203ENST00000578966 PTPRZ1P23471 2315 aaPredicted RBP0.94□□□□□ -2.26
RPL17-203ENST00000578966 UBR5O95071 2799 aaPredicted RBP0.94□□□□□ -2.26
RPL17-203ENST00000578966 AHCTF1Q8WYP5 2266 aa0.94□□□□□ -2.26
RPL17-203ENST00000578966 DMXL1Q9Y485 3027 aa0.94□□□□□ -2.26
RPL17-203ENST00000578966 C2CD3Q4AC94 2353 aa0.94□□□□□ -2.26
RPL17-203ENST00000578966 ZFYVE26Q68DK2 2539 aa0.94□□□□□ -2.26
RPL17-203ENST00000578966 CREBBPQ92793 2442 aa0.94□□□□□ -2.26
RPL17-203ENST00000578966 CFAP46Q8IYW2 2715 aa0.94□□□□□ -2.26
RPL17-203ENST00000578966 LRBAP50851 2863 aa0.94□□□□□ -2.26
RPL17-203ENST00000578966 DNHD1Q96M86 4753 aa0.93□□□□□ -2.26
RPL17-203ENST00000578966 NF1P21359 2839 aa0.93□□□□□ -2.26
RPL17-203ENST00000578966 MYO9AB2RTY4 2548 aa0.93□□□□□ -2.26
RPL17-203ENST00000578966 CRYBG3Q68DQ2 2970 aa0.93□□□□□ -2.26
RPL17-203ENST00000578966 BOD1L1Q8NFC6 3051 aa0.93□□□□□ -2.26
RPL17-203ENST00000578966 RIF1Q5UIP0 2472 aaKnown RBP0.93□□□□□ -2.26
RPL17-203ENST00000578966 VWFP04275 2813 aa0.93□□□□□ -2.26
RPL17-203ENST00000578966 LOC400499M0QZD8 3231 aa0.93□□□□□ -2.26
RPL17-203ENST00000578966 ITPR1Q14643 2758 aa0.92□□□□□ -2.26
RPL17-203ENST00000578966 TENM4Q6N022 2769 aa0.92□□□□□ -2.26
RPL17-203ENST00000578966 CHD9Q3L8U1 2897 aa0.92□□□□□ -2.26
RPL17-203ENST00000578966 NIPBLQ6KC79 2804 aaeCLIP0.92□□□□□ -2.261e-15■■□□□ 13.4
RPL17-203ENST00000578966 SPTA1P02549 2419 aa0.92□□□□□ -2.26
RPL17-203ENST00000578966 M0QZ58 72 aa0.92□□□□□ -2.26
RPL17-203ENST00000578966 Q5VSD8 79 aa0.92□□□□□ -2.26
RPL17-203ENST00000578966 APLNQ9ULZ1 77 aa0.92□□□□□ -2.26
RPL17-203ENST00000578966 TACC2O95359 2948 aa0.92□□□□□ -2.26
RPL17-203ENST00000578966 ANKHD1Q8IWZ3 2542 aaKnown RBP0.92□□□□□ -2.26
RPL17-203ENST00000578966 SPTAN1Q13813 2472 aaKnown RBP0.92□□□□□ -2.26
RPL17-203ENST00000578966 CEP250Q9BV73 2442 aa0.91□□□□□ -2.26
RPL17-203ENST00000578966 DSPP15924 2871 aaKnown RBP0.91□□□□□ -2.26
RPL17-203ENST00000578966 CACNA1HO95180 2353 aa0.91□□□□□ -2.26
RPL17-203ENST00000578966 PCNX1Q96RV3 2341 aa0.91□□□□□ -2.26
RPL17-203ENST00000578966 A0A096LNI7 61 aa0.91□□□□□ -2.26
RPL17-203ENST00000578966 GVINP1Q7Z2Y8 2422 aa0.91□□□□□ -2.26
RPL17-203ENST00000578966 SPG11Q96JI7 2443 aa0.91□□□□□ -2.26
RPL17-203ENST00000578966 PKDREJQ9NTG1 2253 aa0.91□□□□□ -2.26
RPL17-203ENST00000578966 AKAP6Q13023 2319 aa0.9□□□□□ -2.26
RPL17-203ENST00000578966 ACACAQ13085 2346 aa0.9□□□□□ -2.26
RPL17-203ENST00000578966 PRRC2CQ9Y520 2896 aaKnown RBP0.9□□□□□ -2.26
RPL17-203ENST00000578966 WDFY3Q8IZQ1 3526 aa0.9□□□□□ -2.26
RPL17-203ENST00000578966 CELSR1Q9NYQ6 3014 aa0.9□□□□□ -2.27
RPL17-203ENST00000578966 POLQO75417 2590 aa0.9□□□□□ -2.27
RPL17-203ENST00000578966 UTP20O75691 2785 aaKnown RBP0.9□□□□□ -2.27
RPL17-203ENST00000578966 RPS29P62273 56 aaKnown RBP0.9□□□□□ -2.27
RPL17-203ENST00000578966 SPINK6Q6UWN8 80 aa0.9□□□□□ -2.27
RPL17-203ENST00000578966 FREM2Q5SZK8 3169 aa0.9□□□□□ -2.27
RPL17-203ENST00000578966 EP300Q09472 2414 aaPredicted RBP0.9□□□□□ -2.27
RPL17-203ENST00000578966 COL12A1Q99715 3063 aa0.9□□□□□ -2.27
RPL17-203ENST00000578966 NBPF19A0A087WUL8 3843 aa0.89□□□□□ -2.27
RPL17-203ENST00000578966 A0A0D9SG42 100 aa0.89□□□□□ -2.27
RPL17-203ENST00000578966 LAMA5O15230 3695 aa0.89□□□□□ -2.27
RPL17-203ENST00000578966 DMXL2Q8TDJ6 3036 aa0.89□□□□□ -2.27
RPL17-203ENST00000578966 IGSF10Q6WRI0 2623 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms