RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 SPRR1BP22528 89 aa8.73□□□□□ -1.01
SCARF1-209ENST00000576012 MRPL34Q9BQ48 92 aaKnown RBP8.73□□□□□ -1.01
SCARF1-209ENST00000576012 A0A1B0GVX0 72 aa8.72□□□□□ -1.01
SCARF1-209ENST00000576012 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.71□□□□□ -1.01
SCARF1-209ENST00000576012 HUWE1Q7Z6Z7 4374 aaKnown RBP8.71□□□□□ -1.02
SCARF1-209ENST00000576012 DNAH1Q9P2D7 4330 aa8.7□□□□□ -1.02
SCARF1-209ENST00000576012 DNAH7Q8WXX0 4024 aa8.68□□□□□ -1.02
SCARF1-209ENST00000576012 Q6ZR54 194 aa8.67□□□□□ -1.02
SCARF1-209ENST00000576012 CIRBP-AS1Q8TBR5 109 aa8.67□□□□□ -1.02
SCARF1-209ENST00000576012 DNAH3Q8TD57 4116 aa8.67□□□□□ -1.02
SCARF1-209ENST00000576012 PLAC8Q9NZF1 115 aa8.65□□□□□ -1.03
SCARF1-209ENST00000576012 C14orf177Q52M58 125 aa8.62□□□□□ -1.03
SCARF1-209ENST00000576012 FRAS1Q86XX4 4008 aa8.61□□□□□ -1.03
SCARF1-209ENST00000576012 ASB16-AS1Q495Z4 193 aa8.6□□□□□ -1.03
SCARF1-209ENST00000576012 KRTAP13-1Q8IUC0 172 aa8.6□□□□□ -1.03
SCARF1-209ENST00000576012 PSORS1C2Q9UIG4 136 aa8.6□□□□□ -1.03
SCARF1-209ENST00000576012 WWC2-AS2Q96NR7 200 aa8.59□□□□□ -1.03
SCARF1-209ENST00000576012 A0A1B0GU69 56 aa8.58□□□□□ -1.04
SCARF1-209ENST00000576012 ACYP2P14621 99 aa8.57□□□□□ -1.04
SCARF1-209ENST00000576012 FBN3Q75N90 2809 aa8.55□□□□□ -1.04
SCARF1-209ENST00000576012 SPINK1P00995 79 aa8.54□□□□□ -1.04
SCARF1-209ENST00000576012 APLNQ9ULZ1 77 aa8.54□□□□□ -1.04
SCARF1-209ENST00000576012 NBDYA0A0U1RRE5 68 aa8.52□□□□□ -1.05
SCARF1-209ENST00000576012 IGKV2D-30A0A075B6S6 120 aa8.51□□□□□ -1.05
SCARF1-209ENST00000576012 IGKV2-30P06310 120 aa8.51□□□□□ -1.05
SCARF1-209ENST00000576012 PLECQ15149 4684 aaKnown RBP8.51□□□□□ -1.05
SCARF1-209ENST00000576012 SPACA4Q8TDM5 124 aa8.51□□□□□ -1.05
SCARF1-209ENST00000576012 DNHD1Q96M86 4753 aa8.5□□□□□ -1.05
SCARF1-209ENST00000576012 RTL8CO15255 209 aa8.49□□□□□ -1.05
SCARF1-209ENST00000576012 ZNF861PO60384 105 aa8.47□□□□□ -1.05
SCARF1-209ENST00000576012 MEGF8Q7Z7M0 2845 aa8.47□□□□□ -1.05
SCARF1-209ENST00000576012 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.05
SCARF1-209ENST00000576012 MIR22HGQ0VDD5 57 aa8.46□□□□□ -1.05
SCARF1-209ENST00000576012 IGLV5-52A0A0A0MRZ9 124 aa8.46□□□□□ -1.06
SCARF1-209ENST00000576012 PLA2G1BP04054 148 aaKnown RBP8.46□□□□□ -1.06
SCARF1-209ENST00000576012 LINC00483Q53H64 154 aa8.46□□□□□ -1.06
SCARF1-209ENST00000576012 CSAG1Q6PB30 78 aa8.43□□□□□ -1.06
SCARF1-209ENST00000576012 DNAH8Q96JB1 4490 aa8.42□□□□□ -1.06
SCARF1-209ENST00000576012 KRTAP13-3Q3SY46 172 aa8.42□□□□□ -1.06
SCARF1-209ENST00000576012 Q6ZRN7 208 aaPredicted RBP8.42□□□□□ -1.06
SCARF1-209ENST00000576012 KMT2AQ03164 3969 aa8.41□□□□□ -1.06
SCARF1-209ENST00000576012 A0A087WTM6 91 aa8.41□□□□□ -1.06
SCARF1-209ENST00000576012 C1orf134Q5TEV5 83 aa8.41□□□□□ -1.06
SCARF1-209ENST00000576012 DMAC1Q96GE9 116 aa8.41□□□□□ -1.06
SCARF1-209ENST00000576012 STARD9Q9P2P6 4700 aa8.41□□□□□ -1.06
SCARF1-209ENST00000576012 PRKDCP78527 4128 aaKnown RBP8.4□□□□□ -1.06
SCARF1-209ENST00000576012 UQCR11O14957 56 aa8.39□□□□□ -1.07
SCARF1-209ENST00000576012 Q8N1X5 172 aa8.36□□□□□ -1.07
SCARF1-209ENST00000576012 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
SCARF1-209ENST00000576012 FAM229AH3BQW9 127 aa8.34□□□□□ -1.07
SCARF1-209ENST00000576012 LY6G6CO95867 125 aa8.34□□□□□ -1.07
SCARF1-209ENST00000576012 IGLV7-43P04211 117 aa8.33□□□□□ -1.08
SCARF1-209ENST00000576012 NUPR2A6NF83 97 aa8.3□□□□□ -1.08
SCARF1-209ENST00000576012 DNAH17Q9UFH2 4485 aa8.3□□□□□ -1.08
SCARF1-209ENST00000576012 CRIPTQ9P021 101 aa8.27□□□□□ -1.09
SCARF1-209ENST00000576012 DMBT1Q9UGM3 2413 aaPredicted RBP8.26□□□□□ -1.09
SCARF1-209ENST00000576012 ROMO1P60602 79 aa8.25□□□□□ -1.09
SCARF1-209ENST00000576012 ALMS1Q8TCU4 4167 aa8.25□□□□□ -1.09
SCARF1-209ENST00000576012 HECTD4Q9Y4D8 3996 aa8.21□□□□□ -1.09
SCARF1-209ENST00000576012 KRTAP21-3Q3LHN1 58 aa8.21□□□□□ -1.1
SCARF1-209ENST00000576012 KRTAP13-2Q52LG2 175 aa8.21□□□□□ -1.1
SCARF1-209ENST00000576012 SSBP3-AS1Q7Z2R9 100 aa8.2□□□□□ -1.1
SCARF1-209ENST00000576012 DNAH6Q9C0G6 4158 aa8.2□□□□□ -1.1
SCARF1-209ENST00000576012 DNAH2Q9P225 4427 aa8.19□□□□□ -1.1
SCARF1-209ENST00000576012 VPS13DQ5THJ4 4388 aa8.18□□□□□ -1.1
SCARF1-209ENST00000576012 DYNC2H1Q8NCM8 4307 aaKnown RBP8.17□□□□□ -1.1
SCARF1-209ENST00000576012 KRTAP10-2P60368 255 aa8.14□□□□□ -1.11
SCARF1-209ENST00000576012 KRTAP16-1A8MUX0 517 aa8.14□□□□□ -1.11
SCARF1-209ENST00000576012 DNAH11Q96DT5 4516 aa8.13□□□□□ -1.11
SCARF1-209ENST00000576012 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
SCARF1-209ENST00000576012 Q6ZSA8 131 aa8.09□□□□□ -1.11
SCARF1-209ENST00000576012 C9orf92A6NGG3 77 aa8.08□□□□□ -1.12
SCARF1-209ENST00000576012 H0YAA0 97 aa8.07□□□□□ -1.12
SCARF1-209ENST00000576012 LRP1BQ9NZR2 4599 aa8.06□□□□□ -1.12
SCARF1-209ENST00000576012 P0C880 135 aa8.04□□□□□ -1.12
SCARF1-209ENST00000576012 LINC00304Q8N9R0 145 aa8.03□□□□□ -1.12
SCARF1-209ENST00000576012 HYDINQ4G0P3 5121 aa8.01□□□□□ -1.13
SCARF1-209ENST00000576012 A0A1B0GU33 70 aa8□□□□□ -1.13
SCARF1-209ENST00000576012 KRTAP10-1P60331 282 aa7.99□□□□□ -1.13
SCARF1-209ENST00000576012 A8MUU9 505 aa7.97□□□□□ -1.13
SCARF1-209ENST00000576012 SMR3BP02814 79 aaPredicted RBP7.96□□□□□ -1.13
SCARF1-209ENST00000576012 KRTAP25-1Q3LHN0 102 aa7.96□□□□□ -1.13
SCARF1-209ENST00000576012 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
SCARF1-209ENST00000576012 DNAH5Q8TE73 4624 aa7.92□□□□□ -1.14
SCARF1-209ENST00000576012 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
SCARF1-209ENST00000576012 A0A0D9SG42 100 aa7.88□□□□□ -1.15
SCARF1-209ENST00000576012 H1FX-AS1Q4G0G2 97 aa7.88□□□□□ -1.15
SCARF1-209ENST00000576012 PKHD1P08F94 4074 aa7.87□□□□□ -1.15
SCARF1-209ENST00000576012 FAT2Q9NYQ8 4349 aa7.87□□□□□ -1.15
SCARF1-209ENST00000576012 NDUFAF8A1L188 74 aa7.87□□□□□ -1.15
SCARF1-209ENST00000576012 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
SCARF1-209ENST00000576012 K7ERS5 55 aa7.82□□□□□ -1.16
SCARF1-209ENST00000576012 C20orf166-AS1Q96NR2 134 aa7.8□□□□□ -1.16
SCARF1-209ENST00000576012 COX6B2Q6YFQ2 88 aa7.79□□□□□ -1.16
SCARF1-209ENST00000576012 FAT1Q14517 4588 aa7.77□□□□□ -1.17
SCARF1-209ENST00000576012 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
SCARF1-209ENST00000576012 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
SCARF1-209ENST00000576012 C10orf95Q9H7T3 257 aa7.74□□□□□ -1.17
SCARF1-209ENST00000576012 PKD1P98161 4303 aa7.71□□□□□ -1.17
SCARF1-209ENST00000576012 SACSQ9NZJ4 4579 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms