RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 PANO1I0J062 215 aa4.69□□□□□ -1.66
RPA1-207ENST00000574049 DNAH3Q8TD57 4116 aa4.69□□□□□ -1.66
RPA1-207ENST00000574049 LCA10Q71F78 164 aa4.69□□□□□ -1.66
RPA1-207ENST00000574049 Q8N9P0 234 aaPredicted RBP4.69□□□□□ -1.66
RPA1-207ENST00000574049 LINC00313P59037 77 aa4.68□□□□□ -1.66
RPA1-207ENST00000574049 KRTAP10-2P60368 255 aa4.68□□□□□ -1.66
RPA1-207ENST00000574049 Q6ZR54 194 aa4.68□□□□□ -1.66
RPA1-207ENST00000574049 C9orf92A6NGG3 77 aa4.68□□□□□ -1.66
RPA1-207ENST00000574049 Q6ZRN7 208 aaPredicted RBP4.67□□□□□ -1.66
RPA1-207ENST00000574049 CNBPP62633 177 aaKnown RBP4.67□□□□□ -1.66
RPA1-207ENST00000574049 Q96NJ1 140 aa4.67□□□□□ -1.66
RPA1-207ENST00000574049 ZNF861PO60384 105 aa4.66□□□□□ -1.66
RPA1-207ENST00000574049 STARD9Q9P2P6 4700 aa4.66□□□□□ -1.66
RPA1-207ENST00000574049 TLX1NBP0CAT3 122 aa4.66□□□□□ -1.66
RPA1-207ENST00000574049 CDC42SE1Q9NRR8 79 aa4.66□□□□□ -1.66
RPA1-207ENST00000574049 A8MWP4 228 aa4.65□□□□□ -1.66
RPA1-207ENST00000574049 LYSTQ99698 3801 aa4.65□□□□□ -1.66
RPA1-207ENST00000574049 A0A1B0GW54 56 aa4.64□□□□□ -1.67
RPA1-207ENST00000574049 IGLV5-48A0A075B6I7 105 aa4.64□□□□□ -1.67
RPA1-207ENST00000574049 DNAH10Q8IVF4 4471 aa4.63□□□□□ -1.67
RPA1-207ENST00000574049 H3BPC8 53 aa4.63□□□□□ -1.67
RPA1-207ENST00000574049 LCE6AA0A183 80 aa4.63□□□□□ -1.67
RPA1-207ENST00000574049 SPINK7P58062 85 aa4.63□□□□□ -1.67
RPA1-207ENST00000574049 SPRR4Q96PI1 79 aa4.62□□□□□ -1.67
RPA1-207ENST00000574049 KRTAP7-1Q8IUC3 87 aa4.62□□□□□ -1.67
RPA1-207ENST00000574049 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
RPA1-207ENST00000574049 C8orf17Q9NRJ1 99 aa4.62□□□□□ -1.67
RPA1-207ENST00000574049 IGLV7-43P04211 117 aa4.61□□□□□ -1.67
RPA1-207ENST00000574049 ACYP2P14621 99 aa4.61□□□□□ -1.67
RPA1-207ENST00000574049 MRPL34Q9BQ48 92 aaKnown RBP4.61□□□□□ -1.67
RPA1-207ENST00000574049 KRTAP10-1P60331 282 aa4.61□□□□□ -1.67
RPA1-207ENST00000574049 KRTAP11-1Q8IUC1 163 aa4.61□□□□□ -1.67
RPA1-207ENST00000574049 Q8N1X5 172 aa4.6□□□□□ -1.67
RPA1-207ENST00000574049 TP53AIP1Q9HCN2 124 aa4.6□□□□□ -1.67
RPA1-207ENST00000574049 K7ERS5 55 aa4.59□□□□□ -1.67
RPA1-207ENST00000574049 LINC01554Q52M75 96 aa4.59□□□□□ -1.68
RPA1-207ENST00000574049 SPANXA2-OT1Q8N9U9 137 aa4.59□□□□□ -1.68
RPA1-207ENST00000574049 A0A1B0GVX0 72 aa4.58□□□□□ -1.68
RPA1-207ENST00000574049 KMT2AQ03164 3969 aa4.58□□□□□ -1.68
RPA1-207ENST00000574049 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
RPA1-207ENST00000574049 MIR22HGQ0VDD5 57 aa4.57□□□□□ -1.68
RPA1-207ENST00000574049 UQCR11O14957 56 aa4.57□□□□□ -1.68
RPA1-207ENST00000574049 DNAH7Q8WXX0 4024 aa4.56□□□□□ -1.68
RPA1-207ENST00000574049 SPRR1AP35321 89 aa4.55□□□□□ -1.68
RPA1-207ENST00000574049 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
RPA1-207ENST00000574049 IGLV7-46A0A075B6I9 117 aa4.54□□□□□ -1.68
RPA1-207ENST00000574049 LUZP6Q538Z0 58 aa4.54□□□□□ -1.68
RPA1-207ENST00000574049 DNAH1Q9P2D7 4330 aa4.54□□□□□ -1.68
RPA1-207ENST00000574049 SSBP3-AS1Q7Z2R9 100 aa4.54□□□□□ -1.68
RPA1-207ENST00000574049 LINC00304Q8N9R0 145 aa4.54□□□□□ -1.68
RPA1-207ENST00000574049 A0A087X002 238 aa4.53□□□□□ -1.68
RPA1-207ENST00000574049 NOTCH2NLQ7Z3S9 236 aa4.53□□□□□ -1.68
RPA1-207ENST00000574049 CSAG1Q6PB30 78 aa4.53□□□□□ -1.68
RPA1-207ENST00000574049 CRIPTQ9P021 101 aa4.53□□□□□ -1.68
RPA1-207ENST00000574049 ZCCHC13Q8WW36 166 aaKnown RBP4.53□□□□□ -1.68
RPA1-207ENST00000574049 HRES1P13985 223 aa4.52□□□□□ -1.69
RPA1-207ENST00000574049 VPS13DQ5THJ4 4388 aa4.52□□□□□ -1.69
RPA1-207ENST00000574049 PLAC8Q9NZF1 115 aa4.52□□□□□ -1.69
RPA1-207ENST00000574049 LINC01558Q9Y6Z2 57 aa4.52□□□□□ -1.69
RPA1-207ENST00000574049 LCE2BO14633 110 aa4.5□□□□□ -1.69
RPA1-207ENST00000574049 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
RPA1-207ENST00000574049 A6NN06 94 aa4.49□□□□□ -1.69
RPA1-207ENST00000574049 KRTAP4-16G5E9R7 235 aaPredicted RBP4.49□□□□□ -1.69
RPA1-207ENST00000574049 A0A0D9SG42 100 aa4.48□□□□□ -1.69
RPA1-207ENST00000574049 DNAH11Q96DT5 4516 aa4.48□□□□□ -1.69
RPA1-207ENST00000574049 MMP24-AS1A0A0U1RRL7 71 aa4.48□□□□□ -1.69
RPA1-207ENST00000574049 HYDINQ4G0P3 5121 aa4.47□□□□□ -1.69
RPA1-207ENST00000574049 LINC00472Q9H8W2 130 aa4.47□□□□□ -1.69
RPA1-207ENST00000574049 LCE2AQ5TA79 106 aaPredicted RBP4.46□□□□□ -1.7
RPA1-207ENST00000574049 DNAH2Q9P225 4427 aa4.43□□□□□ -1.7
RPA1-207ENST00000574049 KMT2CQ8NEZ4 4911 aaKnown RBP4.43□□□□□ -1.7
RPA1-207ENST00000574049 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
RPA1-207ENST00000574049 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
RPA1-207ENST00000574049 SACSQ9NZJ4 4579 aa4.42□□□□□ -1.7
RPA1-207ENST00000574049 Q5W150 140 aa4.42□□□□□ -1.7
RPA1-207ENST00000574049 Q6ZSA8 131 aa4.39□□□□□ -1.71
RPA1-207ENST00000574049 DNAH5Q8TE73 4624 aa4.38□□□□□ -1.71
RPA1-207ENST00000574049 SPRR1BP22528 89 aa4.38□□□□□ -1.71
RPA1-207ENST00000574049 DNAH17Q9UFH2 4485 aa4.38□□□□□ -1.71
RPA1-207ENST00000574049 Q5VSD8 79 aa4.38□□□□□ -1.71
RPA1-207ENST00000574049 KRTAP13-1Q8IUC0 172 aa4.38□□□□□ -1.71
RPA1-207ENST00000574049 FAT1Q14517 4588 aa4.37□□□□□ -1.71
RPA1-207ENST00000574049 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
RPA1-207ENST00000574049 DNAH6Q9C0G6 4158 aa4.37□□□□□ -1.71
RPA1-207ENST00000574049 ALMS1Q8TCU4 4167 aa4.35□□□□□ -1.71
RPA1-207ENST00000574049 LRP1BQ9NZR2 4599 aa4.35□□□□□ -1.71
RPA1-207ENST00000574049 DYNC1H1Q14204 4646 aaKnown RBP4.35□□□□□ -1.71
RPA1-207ENST00000574049 COX6B2Q6YFQ2 88 aa4.34□□□□□ -1.71
RPA1-207ENST00000574049 FRAS1Q86XX4 4008 aa4.34□□□□□ -1.71
RPA1-207ENST00000574049 PKHD1P08F94 4074 aa4.33□□□□□ -1.72
RPA1-207ENST00000574049 RYR2Q92736 4967 aa4.32□□□□□ -1.72
RPA1-207ENST00000574049 KRTAP13-2Q52LG2 175 aa4.31□□□□□ -1.72
RPA1-207ENST00000574049 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
RPA1-207ENST00000574049 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
RPA1-207ENST00000574049 HECTD4Q9Y4D8 3996 aa4.3□□□□□ -1.72
RPA1-207ENST00000574049 KIAA1109Q2LD37 5005 aa4.29□□□□□ -1.72
RPA1-207ENST00000574049 A0A1B0GU33 70 aa4.29□□□□□ -1.72
RPA1-207ENST00000574049 LINC00483Q53H64 154 aa4.29□□□□□ -1.72
RPA1-207ENST00000574049 RYR3Q15413 4870 aa4.28□□□□□ -1.72
RPA1-207ENST00000574049 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms