RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 MRPL34Q9BQ48 92 aaKnown RBP6.06□□□□□ -1.44
SMG6-213ENST00000573166 KTN1-AS1Q86SY8 53 aa6.05□□□□□ -1.44
SMG6-213ENST00000573166 IGLV7-46A0A075B6I9 117 aa6.04□□□□□ -1.44
SMG6-213ENST00000573166 CYP4F30PQ9H0H9 118 aa6.04□□□□□ -1.44
SMG6-213ENST00000573166 LOC101927531A0A1B0GV80 90 aa6.03□□□□□ -1.44
SMG6-213ENST00000573166 MEGF8Q7Z7M0 2845 aa6.03□□□□□ -1.44
SMG6-213ENST00000573166 A0A087X002 238 aa6.02□□□□□ -1.45
SMG6-213ENST00000573166 IGLV8-61A0A075B6I0 122 aa6.02□□□□□ -1.45
SMG6-213ENST00000573166 Q6ZSA8 131 aa6.02□□□□□ -1.45
SMG6-213ENST00000573166 COA5Q86WW8 74 aa6.02□□□□□ -1.45
SMG6-213ENST00000573166 COL7A1Q02388 2944 aa6.01□□□□□ -1.45
SMG6-213ENST00000573166 LINC00483Q53H64 154 aa6.01□□□□□ -1.45
SMG6-213ENST00000573166 C7orf65Q6ZTY9 151 aa6.01□□□□□ -1.45
SMG6-213ENST00000573166 LCA10Q71F78 164 aa6□□□□□ -1.45
SMG6-213ENST00000573166 FP248Q71RG6 208 aaPredicted RBP6□□□□□ -1.45
SMG6-213ENST00000573166 Q8N1X5 172 aa5.99□□□□□ -1.45
SMG6-213ENST00000573166 OCR1Q9BZK8 76 aa5.98□□□□□ -1.45
SMG6-213ENST00000573166 H3BS24 57 aa5.98□□□□□ -1.45
SMG6-213ENST00000573166 SRRM2Q9UQ35 2752 aaKnown RBP5.97□□□□□ -1.45
SMG6-213ENST00000573166 KRTAP13-1Q8IUC0 172 aa5.96□□□□□ -1.46
SMG6-213ENST00000573166 SPINT4Q6UDR6 99 aa5.94□□□□□ -1.46
SMG6-213ENST00000573166 RBM12B-AS1Q9P1G2 102 aa5.94□□□□□ -1.46
SMG6-213ENST00000573166 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
SMG6-213ENST00000573166 COX6B2Q6YFQ2 88 aa5.92□□□□□ -1.46
SMG6-213ENST00000573166 LINC00472Q9H8W2 130 aa5.91□□□□□ -1.46
SMG6-213ENST00000573166 UQCR11O14957 56 aa5.91□□□□□ -1.46
SMG6-213ENST00000573166 KRTAP13-2Q52LG2 175 aa5.9□□□□□ -1.46
SMG6-213ENST00000573166 A0A1B0GVY2 172 aa5.9□□□□□ -1.47
SMG6-213ENST00000573166 DNHD1Q96M86 4753 aa5.89□□□□□ -1.47
SMG6-213ENST00000573166 CSMD3Q7Z407 3707 aa5.88□□□□□ -1.47
SMG6-213ENST00000573166 Q1T7F1 81 aa5.87□□□□□ -1.47
SMG6-213ENST00000573166 MMP24-AS1A0A0U1RRL7 71 aa5.84□□□□□ -1.47
SMG6-213ENST00000573166 HUWE1Q7Z6Z7 4374 aaKnown RBP5.83□□□□□ -1.48
SMG6-213ENST00000573166 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
SMG6-213ENST00000573166 CDC42SE1Q9NRR8 79 aa5.83□□□□□ -1.48
SMG6-213ENST00000573166 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
SMG6-213ENST00000573166 KRTAP1-4P0C5Y4 121 aa5.8□□□□□ -1.48
SMG6-213ENST00000573166 RPS29P62273 56 aaKnown RBP5.79□□□□□ -1.48
SMG6-213ENST00000573166 SEC61BP60468 96 aaKnown RBP5.79□□□□□ -1.48
SMG6-213ENST00000573166 ZCCHC13Q8WW36 166 aaKnown RBP5.78□□□□□ -1.48
SMG6-213ENST00000573166 PRAC1Q96KF2 57 aa5.77□□□□□ -1.49
SMG6-213ENST00000573166 A8MU10 97 aa5.76□□□□□ -1.49
SMG6-213ENST00000573166 DNAH9Q9NYC9 4486 aa5.76□□□□□ -1.49
SMG6-213ENST00000573166 Q8N9P0 234 aaPredicted RBP5.76□□□□□ -1.49
SMG6-213ENST00000573166 ASB16-AS1Q495Z4 193 aa5.75□□□□□ -1.49
SMG6-213ENST00000573166 Q75L30 129 aa5.73□□□□□ -1.49
SMG6-213ENST00000573166 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
SMG6-213ENST00000573166 SPINK7P58062 85 aa5.71□□□□□ -1.49
SMG6-213ENST00000573166 LINC01558Q9Y6Z2 57 aa5.7□□□□□ -1.5
SMG6-213ENST00000573166 Q5W150 140 aa5.69□□□□□ -1.5
SMG6-213ENST00000573166 HRES1P13985 223 aa5.68□□□□□ -1.5
SMG6-213ENST00000573166 CRIPTQ9P021 101 aa5.68□□□□□ -1.5
SMG6-213ENST00000573166 Q5VV11 94 aa5.67□□□□□ -1.5
SMG6-213ENST00000573166 KRTAP29-1A8MX34 341 aaPredicted RBP5.66□□□□□ -1.5
SMG6-213ENST00000573166 M0R2T5 61 aa5.66□□□□□ -1.5
SMG6-213ENST00000573166 ANK2Q01484 3957 aa5.65□□□□□ -1.5
SMG6-213ENST00000573166 PRKDCP78527 4128 aaKnown RBP5.63□□□□□ -1.51
SMG6-213ENST00000573166 CSAG1Q6PB30 78 aa5.62□□□□□ -1.51
SMG6-213ENST00000573166 KRTAP10-8P60410 259 aa5.6□□□□□ -1.51
SMG6-213ENST00000573166 PLECQ15149 4684 aaKnown RBP5.58□□□□□ -1.52
SMG6-213ENST00000573166 A0A1B0GU33 70 aa5.57□□□□□ -1.52
SMG6-213ENST00000573166 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
SMG6-213ENST00000573166 A0A0D9SG42 100 aa5.54□□□□□ -1.52
SMG6-213ENST00000573166 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
SMG6-213ENST00000573166 XP32Q5T750 250 aa5.51□□□□□ -1.53
SMG6-213ENST00000573166 A8MUU9 505 aa5.51□□□□□ -1.53
SMG6-213ENST00000573166 STARD9Q9P2P6 4700 aa5.51□□□□□ -1.53
SMG6-213ENST00000573166 S4R3F8 94 aa5.5□□□□□ -1.53
SMG6-213ENST00000573166 TPRXLQ17RH7 258 aa5.5□□□□□ -1.53
SMG6-213ENST00000573166 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
SMG6-213ENST00000573166 C20orf166-AS1Q96NR2 134 aa5.5□□□□□ -1.53
SMG6-213ENST00000573166 ALMS1Q8TCU4 4167 aa5.48□□□□□ -1.53
SMG6-213ENST00000573166 DNAH10Q8IVF4 4471 aa5.47□□□□□ -1.53
SMG6-213ENST00000573166 KRTAP13-3Q3SY46 172 aa5.46□□□□□ -1.54
SMG6-213ENST00000573166 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
SMG6-213ENST00000573166 A6NN06 94 aa5.44□□□□□ -1.54
SMG6-213ENST00000573166 A0A0A0MQY5 61 aa5.43□□□□□ -1.54
SMG6-213ENST00000573166 VPS13DQ5THJ4 4388 aa5.42□□□□□ -1.54
SMG6-213ENST00000573166 KRTAP10-4P60372 401 aaPredicted RBP5.42□□□□□ -1.54
SMG6-213ENST00000573166 DNAH5Q8TE73 4624 aa5.42□□□□□ -1.54
SMG6-213ENST00000573166 DNAH1Q9P2D7 4330 aa5.41□□□□□ -1.54
SMG6-213ENST00000573166 DNAH3Q8TD57 4116 aa5.41□□□□□ -1.54
SMG6-213ENST00000573166 CMYA5Q8N3K9 4069 aa5.4□□□□□ -1.54
SMG6-213ENST00000573166 LYSTQ99698 3801 aa5.4□□□□□ -1.55
SMG6-213ENST00000573166 ADM2Q7Z4H4 148 aa5.4□□□□□ -1.55
SMG6-213ENST00000573166 KRTAP16-1A8MUX0 517 aa5.39□□□□□ -1.55
SMG6-213ENST00000573166 H1FX-AS1Q4G0G2 97 aa5.39□□□□□ -1.55
SMG6-213ENST00000573166 MT1HL1P0DM35 61 aa5.39□□□□□ -1.55
SMG6-213ENST00000573166 DNAH11Q96DT5 4516 aa5.37□□□□□ -1.55
SMG6-213ENST00000573166 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
SMG6-213ENST00000573166 R4GN34 69 aa5.32□□□□□ -1.56
SMG6-213ENST00000573166 DYNC1H1Q14204 4646 aaKnown RBP5.31□□□□□ -1.56
SMG6-213ENST00000573166 KMT2AQ03164 3969 aa5.3□□□□□ -1.56
SMG6-213ENST00000573166 CAMK2N1Q7Z7J9 78 aa5.3□□□□□ -1.56
SMG6-213ENST00000573166 ROMO1P60602 79 aa5.29□□□□□ -1.56
SMG6-213ENST00000573166 NDUFAF8A1L188 74 aa5.27□□□□□ -1.57
SMG6-213ENST00000573166 LRP1BQ9NZR2 4599 aa5.26□□□□□ -1.57
SMG6-213ENST00000573166 KIAA1109Q2LD37 5005 aa5.26□□□□□ -1.57
SMG6-213ENST00000573166 FAT1Q14517 4588 aa5.25□□□□□ -1.57
SMG6-213ENST00000573166 DNAH17Q9UFH2 4485 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms