RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 LOC101927531A0A1B0GV80 90 aa9.11□□□□□ -0.95
USP43-202ENST00000570475 HRES1P13985 223 aa9.11□□□□□ -0.95
USP43-202ENST00000570475 IGLV7-43P04211 117 aa9.1□□□□□ -0.95
USP43-202ENST00000570475 Q5W150 140 aa9.1□□□□□ -0.95
USP43-202ENST00000570475 MEGF8Q7Z7M0 2845 aa9.09□□□□□ -0.95
USP43-202ENST00000570475 SPINK1P00995 79 aa9.09□□□□□ -0.95
USP43-202ENST00000570475 LINC00313P59037 77 aa9.07□□□□□ -0.96
USP43-202ENST00000570475 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
USP43-202ENST00000570475 LCA10Q71F78 164 aa9.06□□□□□ -0.96
USP43-202ENST00000570475 SPINK7P58062 85 aa9.06□□□□□ -0.96
USP43-202ENST00000570475 DNAH9Q9NYC9 4486 aa9.03□□□□□ -0.96
USP43-202ENST00000570475 PLAC8Q9NZF1 115 aa9.02□□□□□ -0.97
USP43-202ENST00000570475 ACYP2P14621 99 aa9.02□□□□□ -0.97
USP43-202ENST00000570475 LINC00483Q53H64 154 aa9.02□□□□□ -0.97
USP43-202ENST00000570475 Q75L30 129 aa9□□□□□ -0.97
USP43-202ENST00000570475 Q6ZR54 194 aa9□□□□□ -0.97
USP43-202ENST00000570475 KRTAP10-2P60368 255 aa8.99□□□□□ -0.97
USP43-202ENST00000570475 ATP11AUNQ6ZP68 121 aa8.97□□□□□ -0.97
USP43-202ENST00000570475 A0A1B0GU69 56 aa8.96□□□□□ -0.97
USP43-202ENST00000570475 CMYA5Q8N3K9 4069 aa8.96□□□□□ -0.98
USP43-202ENST00000570475 LINC01558Q9Y6Z2 57 aa8.95□□□□□ -0.98
USP43-202ENST00000570475 PLECQ15149 4684 aaKnown RBP8.95□□□□□ -0.98
USP43-202ENST00000570475 CDC42SE1Q9NRR8 79 aa8.94□□□□□ -0.98
USP43-202ENST00000570475 SSBP3-AS1Q7Z2R9 100 aa8.93□□□□□ -0.98
USP43-202ENST00000570475 RBM12B-AS1Q9P1G2 102 aa8.93□□□□□ -0.98
USP43-202ENST00000570475 C7orf65Q6ZTY9 151 aa8.93□□□□□ -0.98
USP43-202ENST00000570475 FAM229AH3BQW9 127 aa8.92□□□□□ -0.98
USP43-202ENST00000570475 PLA2G1BP04054 148 aaKnown RBP8.92□□□□□ -0.98
USP43-202ENST00000570475 DNAH7Q8WXX0 4024 aa8.91□□□□□ -0.98
USP43-202ENST00000570475 KTN1-AS1Q86SY8 53 aa8.91□□□□□ -0.98
USP43-202ENST00000570475 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
USP43-202ENST00000570475 ASB16-AS1Q495Z4 193 aa8.87□□□□□ -0.99
USP43-202ENST00000570475 Q8N1X5 172 aa8.87□□□□□ -0.99
USP43-202ENST00000570475 TYMSOSQ8TAI1 123 aa8.87□□□□□ -0.99
USP43-202ENST00000570475 SMR3BP02814 79 aaPredicted RBP8.86□□□□□ -0.99
USP43-202ENST00000570475 KRTAP10-1P60331 282 aa8.84□□□□□ -0.99
USP43-202ENST00000570475 PRAC1Q96KF2 57 aa8.83□□□□□ -1
USP43-202ENST00000570475 DNAH1Q9P2D7 4330 aa8.83□□□□□ -1
USP43-202ENST00000570475 KRTAP13-2Q52LG2 175 aa8.81□□□□□ -1
USP43-202ENST00000570475 C9orf92A6NGG3 77 aa8.81□□□□□ -1
USP43-202ENST00000570475 DMBT1Q9UGM3 2413 aaPredicted RBP8.79□□□□□ -1
USP43-202ENST00000570475 H3BS24 57 aa8.79□□□□□ -1
USP43-202ENST00000570475 DNAH3Q8TD57 4116 aa8.78□□□□□ -1
USP43-202ENST00000570475 FRAS1Q86XX4 4008 aa8.77□□□□□ -1.01
USP43-202ENST00000570475 STARD9Q9P2P6 4700 aa8.77□□□□□ -1.01
USP43-202ENST00000570475 A6NN06 94 aa8.75□□□□□ -1.01
USP43-202ENST00000570475 MIR22HGQ0VDD5 57 aa8.74□□□□□ -1.01
USP43-202ENST00000570475 KMT2AQ03164 3969 aa8.74□□□□□ -1.01
USP43-202ENST00000570475 DMAC1Q96GE9 116 aa8.74□□□□□ -1.01
USP43-202ENST00000570475 FLG2Q5D862 2391 aaPredicted RBP8.73□□□□□ -1.01
USP43-202ENST00000570475 UQCR11O14957 56 aa8.72□□□□□ -1.01
USP43-202ENST00000570475 ADM2Q7Z4H4 148 aa8.72□□□□□ -1.01
USP43-202ENST00000570475 PRKDCP78527 4128 aaKnown RBP8.67□□□□□ -1.02
USP43-202ENST00000570475 DNAH8Q96JB1 4490 aa8.66□□□□□ -1.02
USP43-202ENST00000570475 KRTAP13-3Q3SY46 172 aa8.66□□□□□ -1.02
USP43-202ENST00000570475 LINC00304Q8N9R0 145 aa8.66□□□□□ -1.02
USP43-202ENST00000570475 DNAH11Q96DT5 4516 aa8.62□□□□□ -1.03
USP43-202ENST00000570475 DNAH17Q9UFH2 4485 aa8.58□□□□□ -1.04
USP43-202ENST00000570475 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
USP43-202ENST00000570475 VPS13DQ5THJ4 4388 aa8.54□□□□□ -1.04
USP43-202ENST00000570475 KRTAP16-1A8MUX0 517 aa8.54□□□□□ -1.04
USP43-202ENST00000570475 DNAH6Q9C0G6 4158 aa8.52□□□□□ -1.05
USP43-202ENST00000570475 DNAH2Q9P225 4427 aa8.51□□□□□ -1.05
USP43-202ENST00000570475 HECTD4Q9Y4D8 3996 aa8.5□□□□□ -1.05
USP43-202ENST00000570475 DNHD1Q96M86 4753 aa8.49□□□□□ -1.05
USP43-202ENST00000570475 SPATA8Q6RVD6 105 aa8.48□□□□□ -1.05
USP43-202ENST00000570475 LRP1BQ9NZR2 4599 aa8.48□□□□□ -1.05
USP43-202ENST00000570475 CSAG1Q6PB30 78 aa8.47□□□□□ -1.05
USP43-202ENST00000570475 Q6ZSA8 131 aa8.47□□□□□ -1.05
USP43-202ENST00000570475 CRIPTQ9P021 101 aa8.45□□□□□ -1.06
USP43-202ENST00000570475 A0A1B0GU33 70 aa8.38□□□□□ -1.07
USP43-202ENST00000570475 KRTAP21-3Q3LHN1 58 aa8.38□□□□□ -1.07
USP43-202ENST00000570475 LINC01554Q52M75 96 aa8.37□□□□□ -1.07
USP43-202ENST00000570475 A0A0D9SG42 100 aa8.34□□□□□ -1.07
USP43-202ENST00000570475 K7ERS5 55 aa8.34□□□□□ -1.07
USP43-202ENST00000570475 DYNC2H1Q8NCM8 4307 aaKnown RBP8.34□□□□□ -1.08
USP43-202ENST00000570475 DNAH5Q8TE73 4624 aa8.3□□□□□ -1.08
USP43-202ENST00000570475 VPS13BQ7Z7G8 4022 aa8.27□□□□□ -1.09
USP43-202ENST00000570475 HYDINQ4G0P3 5121 aa8.26□□□□□ -1.09
USP43-202ENST00000570475 ALMS1Q8TCU4 4167 aa8.25□□□□□ -1.09
USP43-202ENST00000570475 H0YAA0 97 aa8.24□□□□□ -1.09
USP43-202ENST00000570475 FAT1Q14517 4588 aa8.24□□□□□ -1.09
USP43-202ENST00000570475 H1FX-AS1Q4G0G2 97 aa8.21□□□□□ -1.09
USP43-202ENST00000570475 A8MUU9 505 aa8.17□□□□□ -1.1
USP43-202ENST00000570475 KRTAP3-1Q9BYR8 98 aa8.17□□□□□ -1.1
USP43-202ENST00000570475 C20orf166-AS1Q96NR2 134 aa8.16□□□□□ -1.1
USP43-202ENST00000570475 COX6B2Q6YFQ2 88 aa8.15□□□□□ -1.11
USP43-202ENST00000570475 PKHD1P08F94 4074 aa8.13□□□□□ -1.11
USP43-202ENST00000570475 RPS29P62273 56 aaKnown RBP8.1□□□□□ -1.11
USP43-202ENST00000570475 FAT2Q9NYQ8 4349 aa8.07□□□□□ -1.12
USP43-202ENST00000570475 SPINT4Q6UDR6 99 aa8.03□□□□□ -1.12
USP43-202ENST00000570475 Q5VSD8 79 aa8.03□□□□□ -1.12
USP43-202ENST00000570475 DYNC1H1Q14204 4646 aaKnown RBP8.02□□□□□ -1.13
USP43-202ENST00000570475 KRTAP25-1Q3LHN0 102 aa8.01□□□□□ -1.13
USP43-202ENST00000570475 MYCBP2O75592 4640 aa8.01□□□□□ -1.13
USP43-202ENST00000570475 S4R3F8 94 aa7.99□□□□□ -1.13
USP43-202ENST00000570475 RPL37P61927 97 aaKnown RBP7.96□□□□□ -1.13
USP43-202ENST00000570475 PKD1P98161 4303 aa7.96□□□□□ -1.14
USP43-202ENST00000570475 A0A1B0GVY2 172 aa7.91□□□□□ -1.14
USP43-202ENST00000570475 KRTAP10-8P60410 259 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms