RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820		A0A087WTM6	91 aa		7.37	□□□□□ -1.23
SPG7-222	ENST00000569820	PRLH	P81277	87 aa		7.37	□□□□□ -1.23
SPG7-222	ENST00000569820	WWC2-AS2	Q96NR7	200 aa		7.36	□□□□□ -1.23
SPG7-222	ENST00000569820	SPAG11A	Q6PDA7	123 aa		7.35	□□□□□ -1.23
SPG7-222	ENST00000569820	PANO1	I0J062	215 aa		7.34	□□□□□ -1.23
SPG7-222	ENST00000569820	LY6G6C	O95867	125 aa		7.34	□□□□□ -1.23
SPG7-222	ENST00000569820	LINC00472	Q9H8W2	130 aa		7.34	□□□□□ -1.23
SPG7-222	ENST00000569820	DNAH6	Q9C0G6	4158 aa		7.33	□□□□□ -1.24
SPG7-222	ENST00000569820	PCOTH	Q58A44	107 aa		7.33	□□□□□ -1.24
SPG7-222	ENST00000569820	ADM2	Q7Z4H4	148 aa		7.33	□□□□□ -1.24
SPG7-222	ENST00000569820		H0Y9J4	135 aa		7.32	□□□□□ -1.24
SPG7-222	ENST00000569820	C1orf134	Q5TEV5	83 aa		7.32	□□□□□ -1.24
SPG7-222	ENST00000569820	ALMS1	Q8TCU4	4167 aa		7.32	□□□□□ -1.24
SPG7-222	ENST00000569820	DNAH17	Q9UFH2	4485 aa		7.31	□□□□□ -1.24
SPG7-222	ENST00000569820	MMP24-AS1	A0A0U1RRL7	71 aa		7.31	□□□□□ -1.24
SPG7-222	ENST00000569820	KRTAP11-1	Q8IUC1	163 aa		7.31	□□□□□ -1.24
SPG7-222	ENST00000569820	HECTD4	Q9Y4D8	3996 aa		7.3	□□□□□ -1.24
SPG7-222	ENST00000569820	RTL8C	O15255	209 aa		7.29	□□□□□ -1.24
SPG7-222	ENST00000569820	SPACA4	Q8TDM5	124 aa		7.29	□□□□□ -1.24
SPG7-222	ENST00000569820	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.29	□□□□□ -1.24
SPG7-222	ENST00000569820	TP53AIP1	Q9HCN2	124 aa		7.27	□□□□□ -1.25
SPG7-222	ENST00000569820	RETNLB	Q9BQ08	111 aa		7.26	□□□□□ -1.25
SPG7-222	ENST00000569820	SPRR1B	P22528	89 aa		7.25	□□□□□ -1.25
SPG7-222	ENST00000569820	FRAS1	Q86XX4	4008 aa		7.24	□□□□□ -1.25
SPG7-222	ENST00000569820	IGLV5-52	A0A0A0MRZ9	124 aa		7.23	□□□□□ -1.25
SPG7-222	ENST00000569820	HRES1	P13985	223 aa		7.23	□□□□□ -1.25
SPG7-222	ENST00000569820	SRRM2	Q9UQ35	2752 aa	Known RBP	7.22	□□□□□ -1.25
SPG7-222	ENST00000569820	KRTAP13-1	Q8IUC0	172 aa		7.2	□□□□□ -1.26
SPG7-222	ENST00000569820	DNAH11	Q96DT5	4516 aa		7.19	□□□□□ -1.26
SPG7-222	ENST00000569820	C8orf17	Q9NRJ1	99 aa		7.18	□□□□□ -1.26
SPG7-222	ENST00000569820	HYDIN	Q4G0P3	5121 aa		7.18	□□□□□ -1.26
SPG7-222	ENST00000569820	KRTAP10-2	P60368	255 aa		7.18	□□□□□ -1.26
SPG7-222	ENST00000569820	DNAH8	Q96JB1	4490 aa		7.18	□□□□□ -1.26
SPG7-222	ENST00000569820	FAT2	Q9NYQ8	4349 aa		7.17	□□□□□ -1.26
SPG7-222	ENST00000569820		Q96NJ1	140 aa		7.16	□□□□□ -1.26
SPG7-222	ENST00000569820	PKD1	P98161	4303 aa		7.16	□□□□□ -1.26
SPG7-222	ENST00000569820	DNAH5	Q8TE73	4624 aa		7.15	□□□□□ -1.26
SPG7-222	ENST00000569820	CSAG1	Q6PB30	78 aa		7.15	□□□□□ -1.26
SPG7-222	ENST00000569820	ZNF706	Q9Y5V0	76 aa	Predicted RBP	7.15	□□□□□ -1.26
SPG7-222	ENST00000569820	SPATA8	Q6RVD6	105 aa		7.15	□□□□□ -1.27
SPG7-222	ENST00000569820	PSORS1C2	Q9UIG4	136 aa		7.14	□□□□□ -1.27
SPG7-222	ENST00000569820	IGHV6-1	A0A0B4J1U7	121 aa		7.13	□□□□□ -1.27
SPG7-222	ENST00000569820		A0A1B0GVX0	72 aa		7.12	□□□□□ -1.27
SPG7-222	ENST00000569820	MRPL34	Q9BQ48	92 aa	Known RBP	7.12	□□□□□ -1.27
SPG7-222	ENST00000569820	IGLV9-49	A0A0B4J1Y8	123 aa		7.11	□□□□□ -1.27
SPG7-222	ENST00000569820	SACS	Q9NZJ4	4579 aa		7.1	□□□□□ -1.27
SPG7-222	ENST00000569820	CDK2AP2	O75956	126 aa		7.1	□□□□□ -1.27
SPG7-222	ENST00000569820	KRTAP10-1	P60331	282 aa		7.09	□□□□□ -1.28
SPG7-222	ENST00000569820		Q6ZSA8	131 aa		7.09	□□□□□ -1.28
SPG7-222	ENST00000569820	CIRBP-AS1	Q8TBR5	109 aa		7.09	□□□□□ -1.28
SPG7-222	ENST00000569820	ZNF861P	O60384	105 aa		7.06	□□□□□ -1.28
SPG7-222	ENST00000569820	LINC00483	Q53H64	154 aa		7.06	□□□□□ -1.28
SPG7-222	ENST00000569820	ACYP2	P14621	99 aa		7.05	□□□□□ -1.28
SPG7-222	ENST00000569820	MIR22HG	Q0VDD5	57 aa		7.04	□□□□□ -1.28
SPG7-222	ENST00000569820	NOTCH2NL	Q7Z3S9	236 aa		7.04	□□□□□ -1.28
SPG7-222	ENST00000569820	IGLV7-43	P04211	117 aa		7.03	□□□□□ -1.28
SPG7-222	ENST00000569820	ROMO1	P60602	79 aa		7.03	□□□□□ -1.28
SPG7-222	ENST00000569820		A0A1B0GU69	56 aa		7.02	□□□□□ -1.29
SPG7-222	ENST00000569820	UQCR11	O14957	56 aa		7.01	□□□□□ -1.29
SPG7-222	ENST00000569820		Q5W150	140 aa		7.01	□□□□□ -1.29
SPG7-222	ENST00000569820	PKHD1	P08F94	4074 aa		6.99	□□□□□ -1.29
SPG7-222	ENST00000569820	LRP1B	Q9NZR2	4599 aa		6.99	□□□□□ -1.29
SPG7-222	ENST00000569820	KRTAP13-3	Q3SY46	172 aa		6.99	□□□□□ -1.29
SPG7-222	ENST00000569820	ANAPC11	Q9NYG5	84 aa		6.98	□□□□□ -1.29
SPG7-222	ENST00000569820	DMAC1	Q96GE9	116 aa		6.98	□□□□□ -1.29
SPG7-222	ENST00000569820		A0A1B0GVY2	172 aa		6.94	□□□□□ -1.3
SPG7-222	ENST00000569820	SPINK6	Q6UWN8	80 aa		6.94	□□□□□ -1.3
SPG7-222	ENST00000569820	RYR2	Q92736	4967 aa		6.93	□□□□□ -1.3
SPG7-222	ENST00000569820	KRTAP25-1	Q3LHN0	102 aa		6.92	□□□□□ -1.3
SPG7-222	ENST00000569820	KMT2C	Q8NEZ4	4911 aa	Known RBP	6.91	□□□□□ -1.3
SPG7-222	ENST00000569820	VPS13B	Q7Z7G8	4022 aa		6.89	□□□□□ -1.31
SPG7-222	ENST00000569820	DYNC1H1	Q14204	4646 aa	Known RBP	6.88	□□□□□ -1.31
SPG7-222	ENST00000569820	FAM229A	H3BQW9	127 aa		6.85	□□□□□ -1.31
SPG7-222	ENST00000569820	KRTAP1-4	P0C5Y4	121 aa		6.85	□□□□□ -1.31
SPG7-222	ENST00000569820	KRTAP13-2	Q52LG2	175 aa		6.84	□□□□□ -1.31
SPG7-222	ENST00000569820	IGKV2-30	P06310	120 aa		6.83	□□□□□ -1.32
SPG7-222	ENST00000569820	SSBP3-AS1	Q7Z2R9	100 aa		6.83	□□□□□ -1.32
SPG7-222	ENST00000569820	APOB	P04114	4563 aa	Known RBP	6.83	□□□□□ -1.32
SPG7-222	ENST00000569820		A0A0A0MQY5	61 aa		6.82	□□□□□ -1.32
SPG7-222	ENST00000569820		P0C880	135 aa		6.81	□□□□□ -1.32
SPG7-222	ENST00000569820	SMR3B	P02814	79 aa	Predicted RBP	6.79	□□□□□ -1.32
SPG7-222	ENST00000569820	KRTAP10-4	P60372	401 aa	Predicted RBP	6.77	□□□□□ -1.33
SPG7-222	ENST00000569820		A8MUU9	505 aa		6.76	□□□□□ -1.33
SPG7-222	ENST00000569820	FAT1	Q14517	4588 aa		6.74	□□□□□ -1.33
SPG7-222	ENST00000569820	RYR3	Q15413	4870 aa		6.73	□□□□□ -1.33
SPG7-222	ENST00000569820	IGKV2D-30	A0A075B6S6	120 aa		6.72	□□□□□ -1.33
SPG7-222	ENST00000569820	TYMSOS	Q8TAI1	123 aa		6.71	□□□□□ -1.34
SPG7-222	ENST00000569820	LINC00304	Q8N9R0	145 aa		6.7	□□□□□ -1.34
SPG7-222	ENST00000569820	KRTAP16-1	A8MUX0	517 aa		6.67	□□□□□ -1.34
SPG7-222	ENST00000569820	SPINK1	P00995	79 aa		6.66	□□□□□ -1.34
SPG7-222	ENST00000569820	PKHD1L1	Q86WI1	4243 aa		6.64	□□□□□ -1.35
SPG7-222	ENST00000569820	HSPG2	P98160	4391 aa		6.63	□□□□□ -1.35
SPG7-222	ENST00000569820	RPS29	P62273	56 aa	Known RBP	6.6	□□□□□ -1.35
SPG7-222	ENST00000569820		H0YAA0	97 aa		6.6	□□□□□ -1.35
SPG7-222	ENST00000569820		Q8N1X5	172 aa		6.58	□□□□□ -1.36
SPG7-222	ENST00000569820	C20orf166-AS1	Q96NR2	134 aa		6.58	□□□□□ -1.36
SPG7-222	ENST00000569820		Q5VSD8	79 aa		6.58	□□□□□ -1.36
SPG7-222	ENST00000569820	KRTAP17-1	Q9BYP8	105 aa		6.55	□□□□□ -1.36
SPG7-222	ENST00000569820	NDUFAF8	A1L188	74 aa		6.54	□□□□□ -1.36
SPG7-222	ENST00000569820	RYR1	P21817	5038 aa		6.54	□□□□□ -1.36

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