RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 Q5VV11 94 aa12.13□□□□□ -0.47
SCRT1-201ENST00000569446 SPANXA2-OT1Q8N9U9 137 aa12.11□□□□□ -0.47
SCRT1-201ENST00000569446 LCE6AA0A183 80 aa12.11□□□□□ -0.47
SCRT1-201ENST00000569446 Q96NJ1 140 aa12.1□□□□□ -0.47
SCRT1-201ENST00000569446 LYSTQ99698 3801 aa12.1□□□□□ -0.47
SCRT1-201ENST00000569446 IGLV7-46A0A075B6I9 117 aa12.1□□□□□ -0.47
SCRT1-201ENST00000569446 Q5W150 140 aa12.09□□□□□ -0.47
SCRT1-201ENST00000569446 TYMSOSQ8TAI1 123 aa12.09□□□□□ -0.47
SCRT1-201ENST00000569446 PLAC8Q9NZF1 115 aa12.08□□□□□ -0.48
SCRT1-201ENST00000569446 LOC101927531A0A1B0GV80 90 aa12.06□□□□□ -0.48
SCRT1-201ENST00000569446 HRES1P13985 223 aa12.06□□□□□ -0.48
SCRT1-201ENST00000569446 C7orf65Q6ZTY9 151 aa12.06□□□□□ -0.48
SCRT1-201ENST00000569446 KRTAP13-1Q8IUC0 172 aa12.06□□□□□ -0.48
SCRT1-201ENST00000569446 ACYP2P14621 99 aa12.06□□□□□ -0.48
SCRT1-201ENST00000569446 HUWE1Q7Z6Z7 4374 aaKnown RBP12.04□□□□□ -0.48
SCRT1-201ENST00000569446 C9orf92A6NGG3 77 aa12.02□□□□□ -0.48
SCRT1-201ENST00000569446 FLG2Q5D862 2391 aaPredicted RBP12.02□□□□□ -0.49
SCRT1-201ENST00000569446 A0A1B0GU69 56 aa12.02□□□□□ -0.49
SCRT1-201ENST00000569446 SEC61GP60059 68 aa12□□□□□ -0.49
SCRT1-201ENST00000569446 SSBP3-AS1Q7Z2R9 100 aa12□□□□□ -0.49
SCRT1-201ENST00000569446 Q8N1X5 172 aa11.99□□□□□ -0.49
SCRT1-201ENST00000569446 SPINK7P58062 85 aa11.98□□□□□ -0.49
SCRT1-201ENST00000569446 KRTAP10-1P60331 282 aa11.98□□□□□ -0.49
SCRT1-201ENST00000569446 FAM229AH3BQW9 127 aa11.96□□□□□ -0.49
SCRT1-201ENST00000569446 Q6ZR54 194 aa11.95□□□□□ -0.5
SCRT1-201ENST00000569446 LINC00483Q53H64 154 aa11.94□□□□□ -0.5
SCRT1-201ENST00000569446 LCA10Q71F78 164 aa11.88□□□□□ -0.51
SCRT1-201ENST00000569446 C8orf87E5RJ46 101 aa11.88□□□□□ -0.51
SCRT1-201ENST00000569446 ATP11AUNQ6ZP68 121 aa11.85□□□□□ -0.51
SCRT1-201ENST00000569446 CMYA5Q8N3K9 4069 aa11.84□□□□□ -0.51
SCRT1-201ENST00000569446 Q75L30 129 aa11.79□□□□□ -0.52
SCRT1-201ENST00000569446 KRTAP13-2Q52LG2 175 aa11.79□□□□□ -0.52
SCRT1-201ENST00000569446 LINC00304Q8N9R0 145 aa11.77□□□□□ -0.53
SCRT1-201ENST00000569446 PLECQ15149 4684 aaKnown RBP11.76□□□□□ -0.53
SCRT1-201ENST00000569446 CDC42SE1Q9NRR8 79 aa11.76□□□□□ -0.53
SCRT1-201ENST00000569446 LINC01558Q9Y6Z2 57 aa11.76□□□□□ -0.53
SCRT1-201ENST00000569446 PRAC1Q96KF2 57 aa11.73□□□□□ -0.53
SCRT1-201ENST00000569446 DNAH9Q9NYC9 4486 aa11.71□□□□□ -0.53
SCRT1-201ENST00000569446 KTN1-AS1Q86SY8 53 aa11.68□□□□□ -0.54
SCRT1-201ENST00000569446 MIR22HGQ0VDD5 57 aa11.66□□□□□ -0.54
SCRT1-201ENST00000569446 UQCR11O14957 56 aa11.63□□□□□ -0.55
SCRT1-201ENST00000569446 DNAH7Q8WXX0 4024 aa11.62□□□□□ -0.55
SCRT1-201ENST00000569446 DNAH3Q8TD57 4116 aa11.61□□□□□ -0.55
SCRT1-201ENST00000569446 RBM12B-AS1Q9P1G2 102 aa11.56□□□□□ -0.56
SCRT1-201ENST00000569446 ASB16-AS1Q495Z4 193 aa11.56□□□□□ -0.56
SCRT1-201ENST00000569446 DMAC1Q96GE9 116 aa11.54□□□□□ -0.56
SCRT1-201ENST00000569446 STARD9Q9P2P6 4700 aa11.54□□□□□ -0.56
SCRT1-201ENST00000569446 KMT2AQ03164 3969 aa11.52□□□□□ -0.57
SCRT1-201ENST00000569446 ADM2Q7Z4H4 148 aa11.51□□□□□ -0.57
SCRT1-201ENST00000569446 PRKDCP78527 4128 aaKnown RBP11.5□□□□□ -0.57
SCRT1-201ENST00000569446 FRAS1Q86XX4 4008 aa11.44□□□□□ -0.58
SCRT1-201ENST00000569446 DNAH1Q9P2D7 4330 aa11.44□□□□□ -0.58
SCRT1-201ENST00000569446 DNHD1Q96M86 4753 aa11.43□□□□□ -0.58
SCRT1-201ENST00000569446 KRTAP1-4P0C5Y4 121 aa11.43□□□□□ -0.58
SCRT1-201ENST00000569446 DNAH11Q96DT5 4516 aa11.42□□□□□ -0.58
SCRT1-201ENST00000569446 CRIPTQ9P021 101 aa11.39□□□□□ -0.59
SCRT1-201ENST00000569446 A6NN06 94 aa11.38□□□□□ -0.59
SCRT1-201ENST00000569446 A0A0D9SG42 100 aa11.35□□□□□ -0.59
SCRT1-201ENST00000569446 K7ERS5 55 aa11.32□□□□□ -0.6
SCRT1-201ENST00000569446 KRTAP13-3Q3SY46 172 aa11.3□□□□□ -0.6
SCRT1-201ENST00000569446 Q6ZSA8 131 aa11.29□□□□□ -0.6
SCRT1-201ENST00000569446 DNAH8Q96JB1 4490 aa11.27□□□□□ -0.61
SCRT1-201ENST00000569446 SPATA8Q6RVD6 105 aa11.26□□□□□ -0.61
SCRT1-201ENST00000569446 KRTAP16-1A8MUX0 517 aa11.25□□□□□ -0.61
SCRT1-201ENST00000569446 CSAG1Q6PB30 78 aa11.24□□□□□ -0.61
SCRT1-201ENST00000569446 A0A1B0GU33 70 aa11.23□□□□□ -0.61
SCRT1-201ENST00000569446 DNAH6Q9C0G6 4158 aa11.17□□□□□ -0.62
SCRT1-201ENST00000569446 LRP1BQ9NZR2 4599 aa11.17□□□□□ -0.62
SCRT1-201ENST00000569446 DNAH17Q9UFH2 4485 aa11.15□□□□□ -0.62
SCRT1-201ENST00000569446 VPS13DQ5THJ4 4388 aa11.15□□□□□ -0.63
SCRT1-201ENST00000569446 DNAH2Q9P225 4427 aa11.07□□□□□ -0.64
SCRT1-201ENST00000569446 FAT1Q14517 4588 aa11.03□□□□□ -0.64
SCRT1-201ENST00000569446 LINC01554Q52M75 96 aa11.02□□□□□ -0.64
SCRT1-201ENST00000569446 Q5VSD8 79 aa11.02□□□□□ -0.65
SCRT1-201ENST00000569446 HECTD4Q9Y4D8 3996 aa10.99□□□□□ -0.65
SCRT1-201ENST00000569446 DYNC2H1Q8NCM8 4307 aaKnown RBP10.96□□□□□ -0.65
SCRT1-201ENST00000569446 SPINT4Q6UDR6 99 aa10.95□□□□□ -0.66
SCRT1-201ENST00000569446 DNAH5Q8TE73 4624 aa10.94□□□□□ -0.66
SCRT1-201ENST00000569446 H1FX-AS1Q4G0G2 97 aa10.92□□□□□ -0.66
SCRT1-201ENST00000569446 COX6B2Q6YFQ2 88 aa10.91□□□□□ -0.66
SCRT1-201ENST00000569446 H0YAA0 97 aa10.87□□□□□ -0.67
SCRT1-201ENST00000569446 A8MUU9 505 aa10.87□□□□□ -0.67
SCRT1-201ENST00000569446 VPS13BQ7Z7G8 4022 aa10.85□□□□□ -0.67
SCRT1-201ENST00000569446 HYDINQ4G0P3 5121 aa10.85□□□□□ -0.67
SCRT1-201ENST00000569446 C20orf166-AS1Q96NR2 134 aa10.84□□□□□ -0.67
SCRT1-201ENST00000569446 S4R3F8 94 aa10.78□□□□□ -0.68
SCRT1-201ENST00000569446 MYCBP2O75592 4640 aa10.78□□□□□ -0.68
SCRT1-201ENST00000569446 KRTAP3-1Q9BYR8 98 aa10.78□□□□□ -0.68
SCRT1-201ENST00000569446 PKHD1P08F94 4074 aa10.77□□□□□ -0.69
SCRT1-201ENST00000569446 RPS29P62273 56 aaKnown RBP10.75□□□□□ -0.69
SCRT1-201ENST00000569446 KRTAP21-3Q3LHN1 58 aa10.66□□□□□ -0.7
SCRT1-201ENST00000569446 RPL37P61927 97 aaKnown RBP10.65□□□□□ -0.7
SCRT1-201ENST00000569446 DYNC1H1Q14204 4646 aaKnown RBP10.62□□□□□ -0.71
SCRT1-201ENST00000569446 A0A1B0GVY2 172 aa10.62□□□□□ -0.71
SCRT1-201ENST00000569446 ALMS1Q8TCU4 4167 aa10.6□□□□□ -0.71
SCRT1-201ENST00000569446 XP32Q5T750 250 aa10.59□□□□□ -0.71
SCRT1-201ENST00000569446 J3QL48 77 aa10.58□□□□□ -0.72
SCRT1-201ENST00000569446 KRTAP10-8P60410 259 aa10.56□□□□□ -0.72
SCRT1-201ENST00000569446 P0C880 135 aa10.54□□□□□ -0.72
SCRT1-201ENST00000569446 LRP1Q07954 4544 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms