RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 SACSQ9NZJ4 4579 aa5.23□□□□□ -1.57
TCF4-241ENST00000568740 DNAH5Q8TE73 4624 aa5.23□□□□□ -1.57
TCF4-241ENST00000568740 A6NN06 94 aa5.23□□□□□ -1.57
TCF4-241ENST00000568740 C1orf137Q5JT78 98 aa5.23□□□□□ -1.57
TCF4-241ENST00000568740 SMIM29Q86T20 159 aa5.23□□□□□ -1.57
TCF4-241ENST00000568740 CIRBP-AS1Q8TBR5 109 aa5.23□□□□□ -1.57
TCF4-241ENST00000568740 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
TCF4-241ENST00000568740 PKD1P98161 4303 aa5.21□□□□□ -1.57
TCF4-241ENST00000568740 IGKV4-1P06312 121 aa5.21□□□□□ -1.58
TCF4-241ENST00000568740 Q8N1X5 172 aa5.21□□□□□ -1.58
TCF4-241ENST00000568740 RETNLBQ9BQ08 111 aa5.21□□□□□ -1.58
TCF4-241ENST00000568740 LRP1BQ9NZR2 4599 aa5.21□□□□□ -1.58
TCF4-241ENST00000568740 A0A1B0GVX0 72 aa5.2□□□□□ -1.58
TCF4-241ENST00000568740 K7ERS5 55 aa5.2□□□□□ -1.58
TCF4-241ENST00000568740 DEFB116Q30KQ4 102 aa5.2□□□□□ -1.58
TCF4-241ENST00000568740 ATP11AUNQ6ZP68 121 aa5.2□□□□□ -1.58
TCF4-241ENST00000568740 Q8N9L7 120 aa5.2□□□□□ -1.58
TCF4-241ENST00000568740 A0A1W2PNM2 257 aa5.19□□□□□ -1.58
TCF4-241ENST00000568740 IGLV5-48A0A075B6I7 105 aa5.19□□□□□ -1.58
TCF4-241ENST00000568740 PLAC8Q9NZF1 115 aa5.18□□□□□ -1.58
TCF4-241ENST00000568740 SMR3BP02814 79 aaPredicted RBP5.17□□□□□ -1.58
TCF4-241ENST00000568740 IGFL1Q6UW32 110 aa5.17□□□□□ -1.58
TCF4-241ENST00000568740 ALMS1Q8TCU4 4167 aa5.16□□□□□ -1.58
TCF4-241ENST00000568740 hDV103S1A0JD37 113 aa5.16□□□□□ -1.58
TCF4-241ENST00000568740 Q1T7F1 81 aa5.16□□□□□ -1.58
TCF4-241ENST00000568740 KRTAP13-1Q8IUC0 172 aa5.16□□□□□ -1.58
TCF4-241ENST00000568740 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
TCF4-241ENST00000568740 LCE6AA0A183 80 aa5.15□□□□□ -1.58
TCF4-241ENST00000568740 C1orf64Q8NEQ6 169 aa5.14□□□□□ -1.59
TCF4-241ENST00000568740 IGLV7-46A0A075B6I9 117 aa5.13□□□□□ -1.59
TCF4-241ENST00000568740 A0A087WSZ3 146 aa5.13□□□□□ -1.59
TCF4-241ENST00000568740 VPS13BQ7Z7G8 4022 aa5.13□□□□□ -1.59
TCF4-241ENST00000568740 RYR3Q15413 4870 aa5.13□□□□□ -1.59
TCF4-241ENST00000568740 ZNF861PO60384 105 aa5.12□□□□□ -1.59
TCF4-241ENST00000568740 IGLV7-43P04211 117 aa5.11□□□□□ -1.59
TCF4-241ENST00000568740 SPRR4Q96PI1 79 aa5.11□□□□□ -1.59
TCF4-241ENST00000568740 MOBPQ13875 183 aa5.11□□□□□ -1.59
TCF4-241ENST00000568740 ZCCHC13Q8WW36 166 aaKnown RBP5.11□□□□□ -1.59
TCF4-241ENST00000568740 RYR2Q92736 4967 aa5.1□□□□□ -1.59
TCF4-241ENST00000568740 FAT1Q14517 4588 aa5.1□□□□□ -1.59
TCF4-241ENST00000568740 RPL37AP61513 92 aaKnown RBP5.1□□□□□ -1.59
TCF4-241ENST00000568740 Q6ZSA8 131 aa5.1□□□□□ -1.59
TCF4-241ENST00000568740 CYP4F30PQ9H0H9 118 aa5.09□□□□□ -1.6
TCF4-241ENST00000568740 TRAV22A0A0B4J277 110 aa5.08□□□□□ -1.6
TCF4-241ENST00000568740 ROMO1P60602 79 aa5.08□□□□□ -1.6
TCF4-241ENST00000568740 DYNC1H1Q14204 4646 aaKnown RBP5.07□□□□□ -1.6
TCF4-241ENST00000568740 A8MUU9 505 aa5.07□□□□□ -1.6
TCF4-241ENST00000568740 SPRR1BP22528 89 aa5.06□□□□□ -1.6
TCF4-241ENST00000568740 K7EQZ3 153 aa5.05□□□□□ -1.6
TCF4-241ENST00000568740 A0A1B0GVY2 172 aa5.05□□□□□ -1.6
TCF4-241ENST00000568740 SPTSSBQ8NFR3 76 aa5.05□□□□□ -1.6
TCF4-241ENST00000568740 DSCR10P59022 87 aa5.04□□□□□ -1.6
TCF4-241ENST00000568740 NDUFB1O75438 58 aa5.02□□□□□ -1.61
TCF4-241ENST00000568740 LINC00483Q53H64 154 aa5.02□□□□□ -1.61
TCF4-241ENST00000568740 SPINK6Q6UWN8 80 aa5.02□□□□□ -1.61
TCF4-241ENST00000568740 Q5VV11 94 aa5.02□□□□□ -1.61
TCF4-241ENST00000568740 FLG2Q5D862 2391 aaPredicted RBP5.01□□□□□ -1.61
TCF4-241ENST00000568740 KRTAP13-2Q52LG2 175 aa5.01□□□□□ -1.61
TCF4-241ENST00000568740 WFDC13Q8IUB5 93 aa5.01□□□□□ -1.61
TCF4-241ENST00000568740 A8MU10 97 aa5□□□□□ -1.61
TCF4-241ENST00000568740 HCG22E2RYF7 251 aa5□□□□□ -1.61
TCF4-241ENST00000568740 APOBP04114 4563 aaKnown RBP4.99□□□□□ -1.61
TCF4-241ENST00000568740 ASB16-AS1Q495Z4 193 aa4.99□□□□□ -1.61
TCF4-241ENST00000568740 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
TCF4-241ENST00000568740 LIMD2Q9BT23 127 aa4.97□□□□□ -1.61
TCF4-241ENST00000568740 LINC00472Q9H8W2 130 aa4.97□□□□□ -1.61
TCF4-241ENST00000568740 SPANXA2-OT1Q8N9U9 137 aa4.97□□□□□ -1.61
TCF4-241ENST00000568740 EPPK1P58107 5090 aaKnown RBP4.97□□□□□ -1.61
TCF4-241ENST00000568740 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.61
TCF4-241ENST00000568740 KRTAP17-1Q9BYP8 105 aa4.96□□□□□ -1.61
TCF4-241ENST00000568740 KIAA1109Q2LD37 5005 aa4.96□□□□□ -1.62
TCF4-241ENST00000568740 CHKB-CPT1BH3BT56 60 aa4.95□□□□□ -1.62
TCF4-241ENST00000568740 Q96NJ1 140 aa4.95□□□□□ -1.62
TCF4-241ENST00000568740 LINC00208Q96KT6 92 aa4.94□□□□□ -1.62
TCF4-241ENST00000568740 LRP1Q07954 4544 aaKnown RBP4.94□□□□□ -1.62
TCF4-241ENST00000568740 H3BPC8 53 aa4.93□□□□□ -1.62
TCF4-241ENST00000568740 PRR15LQ9BU68 103 aa4.93□□□□□ -1.62
TCF4-241ENST00000568740 TYMSOSQ8TAI1 123 aa4.92□□□□□ -1.62
TCF4-241ENST00000568740 DMBT1Q9UGM3 2413 aaPredicted RBP4.92□□□□□ -1.62
TCF4-241ENST00000568740 LOC101927531A0A1B0GV80 90 aa4.92□□□□□ -1.62
TCF4-241ENST00000568740 KRTAP29-1A8MX34 341 aaPredicted RBP4.92□□□□□ -1.62
TCF4-241ENST00000568740 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
TCF4-241ENST00000568740 C20orf166-AS1Q96NR2 134 aa4.91□□□□□ -1.62
TCF4-241ENST00000568740 H0Y9P7 68 aa4.91□□□□□ -1.62
TCF4-241ENST00000568740 CASC2Q6XLA1 102 aa4.9□□□□□ -1.62
TCF4-241ENST00000568740 P0C880 135 aa4.9□□□□□ -1.63
TCF4-241ENST00000568740 HSPG2P98160 4391 aa4.89□□□□□ -1.63
TCF4-241ENST00000568740 SSBP3-AS1Q7Z2R9 100 aa4.89□□□□□ -1.63
TCF4-241ENST00000568740 MYCBP2O75592 4640 aa4.88□□□□□ -1.63
TCF4-241ENST00000568740 MIR22HGQ0VDD5 57 aa4.88□□□□□ -1.63
TCF4-241ENST00000568740 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
TCF4-241ENST00000568740 MMP24-AS1A0A0U1RRL7 71 aa4.87□□□□□ -1.63
TCF4-241ENST00000568740 Q5VSD8 79 aa4.87□□□□□ -1.63
TCF4-241ENST00000568740 COA5Q86WW8 74 aa4.87□□□□□ -1.63
TCF4-241ENST00000568740 LINC00304Q8N9R0 145 aa4.83□□□□□ -1.64
TCF4-241ENST00000568740 LINC01558Q9Y6Z2 57 aa4.83□□□□□ -1.64
TCF4-241ENST00000568740 PKHD1L1Q86WI1 4243 aa4.82□□□□□ -1.64
TCF4-241ENST00000568740 RYR1P21817 5038 aa4.81□□□□□ -1.64
TCF4-241ENST00000568740 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
TCF4-241ENST00000568740 KRTAP4-5Q9BYR2 181 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms