RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 LINC00483Q53H64 154 aa7.25□□□□□ -1.25
TMEM170A-205ENST00000568559 PRR15Q8IV56 129 aa7.24□□□□□ -1.25
TMEM170A-205ENST00000568559 C8orf17Q9NRJ1 99 aa7.24□□□□□ -1.25
TMEM170A-205ENST00000568559 ATP11AUNQ6ZP68 121 aa7.23□□□□□ -1.25
TMEM170A-205ENST00000568559 MRPL34Q9BQ48 92 aaKnown RBP7.23□□□□□ -1.25
TMEM170A-205ENST00000568559 Q8N1X5 172 aa7.23□□□□□ -1.25
TMEM170A-205ENST00000568559 A0A087X002 238 aa7.22□□□□□ -1.25
TMEM170A-205ENST00000568559 CD164Q04900 197 aa7.22□□□□□ -1.25
TMEM170A-205ENST00000568559 COX6B2Q6YFQ2 88 aa7.2□□□□□ -1.26
TMEM170A-205ENST00000568559 A0A1B0GVX0 72 aa7.2□□□□□ -1.26
TMEM170A-205ENST00000568559 CSMD3Q7Z407 3707 aa7.18□□□□□ -1.26
TMEM170A-205ENST00000568559 A8MUN3 132 aa7.18□□□□□ -1.26
TMEM170A-205ENST00000568559 CMYA5Q8N3K9 4069 aa7.16□□□□□ -1.26
TMEM170A-205ENST00000568559 C8orf87E5RJ46 101 aa7.16□□□□□ -1.26
TMEM170A-205ENST00000568559 PRKDCP78527 4128 aaKnown RBP7.15□□□□□ -1.26
TMEM170A-205ENST00000568559 LINC00472Q9H8W2 130 aa7.14□□□□□ -1.27
TMEM170A-205ENST00000568559 TP53AIP1Q9HCN2 124 aa7.14□□□□□ -1.27
TMEM170A-205ENST00000568559 A0A1B0GVY2 172 aa7.12□□□□□ -1.27
TMEM170A-205ENST00000568559 OCR1Q9BZK8 76 aa7.12□□□□□ -1.27
TMEM170A-205ENST00000568559 DNAH3Q8TD57 4116 aa7.12□□□□□ -1.27
TMEM170A-205ENST00000568559 A8MU10 97 aa7.11□□□□□ -1.27
TMEM170A-205ENST00000568559 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
TMEM170A-205ENST00000568559 PLECQ15149 4684 aaKnown RBP7.1□□□□□ -1.27
TMEM170A-205ENST00000568559 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
TMEM170A-205ENST00000568559 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
TMEM170A-205ENST00000568559 A0A1B0GU69 56 aa7.05□□□□□ -1.28
TMEM170A-205ENST00000568559 K7ERS5 55 aa7.04□□□□□ -1.28
TMEM170A-205ENST00000568559 ACYP2P14621 99 aa7.04□□□□□ -1.28
TMEM170A-205ENST00000568559 Q8N9P0 234 aaPredicted RBP7.04□□□□□ -1.28
TMEM170A-205ENST00000568559 STARD9Q9P2P6 4700 aa7.03□□□□□ -1.28
TMEM170A-205ENST00000568559 MMP24-AS1A0A0U1RRL7 71 aa7.03□□□□□ -1.28
TMEM170A-205ENST00000568559 Q1T7F1 81 aa7.03□□□□□ -1.28
TMEM170A-205ENST00000568559 KRTAP1-4P0C5Y4 121 aa7.02□□□□□ -1.29
TMEM170A-205ENST00000568559 COA5Q86WW8 74 aa7.02□□□□□ -1.29
TMEM170A-205ENST00000568559 RBM12B-AS1Q9P1G2 102 aa7.01□□□□□ -1.29
TMEM170A-205ENST00000568559 NOTCH2NLQ7Z3S9 236 aa7□□□□□ -1.29
TMEM170A-205ENST00000568559 LOC101927531A0A1B0GV80 90 aa6.99□□□□□ -1.29
TMEM170A-205ENST00000568559 H3BPC8 53 aa6.99□□□□□ -1.29
TMEM170A-205ENST00000568559 A0A0D9SG42 100 aa6.98□□□□□ -1.29
TMEM170A-205ENST00000568559 KTN1-AS1Q86SY8 53 aa6.97□□□□□ -1.29
TMEM170A-205ENST00000568559 Q5VV11 94 aa6.95□□□□□ -1.3
TMEM170A-205ENST00000568559 M0R2T5 61 aa6.92□□□□□ -1.3
TMEM170A-205ENST00000568559 ASB16-AS1Q495Z4 193 aa6.92□□□□□ -1.3
TMEM170A-205ENST00000568559 VPS13DQ5THJ4 4388 aa6.92□□□□□ -1.3
TMEM170A-205ENST00000568559 DNAH10Q8IVF4 4471 aa6.91□□□□□ -1.3
TMEM170A-205ENST00000568559 DNAH1Q9P2D7 4330 aa6.9□□□□□ -1.3
TMEM170A-205ENST00000568559 RPS29P62273 56 aaKnown RBP6.89□□□□□ -1.31
TMEM170A-205ENST00000568559 HRES1P13985 223 aa6.89□□□□□ -1.31
TMEM170A-205ENST00000568559 ALMS1Q8TCU4 4167 aa6.88□□□□□ -1.31
TMEM170A-205ENST00000568559 KRTAP29-1A8MX34 341 aaPredicted RBP6.88□□□□□ -1.31
TMEM170A-205ENST00000568559 CYP4F30PQ9H0H9 118 aa6.87□□□□□ -1.31
TMEM170A-205ENST00000568559 LCA10Q71F78 164 aa6.85□□□□□ -1.31
TMEM170A-205ENST00000568559 SPINK7P58062 85 aa6.85□□□□□ -1.31
TMEM170A-205ENST00000568559 ZCCHC13Q8WW36 166 aaKnown RBP6.85□□□□□ -1.31
TMEM170A-205ENST00000568559 KMT2AQ03164 3969 aa6.83□□□□□ -1.32
TMEM170A-205ENST00000568559 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
TMEM170A-205ENST00000568559 LYSTQ99698 3801 aa6.81□□□□□ -1.32
TMEM170A-205ENST00000568559 Q5W150 140 aa6.81□□□□□ -1.32
TMEM170A-205ENST00000568559 PRAC1Q96KF2 57 aa6.81□□□□□ -1.32
TMEM170A-205ENST00000568559 CDC42SE1Q9NRR8 79 aa6.76□□□□□ -1.33
TMEM170A-205ENST00000568559 DNAH11Q96DT5 4516 aa6.75□□□□□ -1.33
TMEM170A-205ENST00000568559 Q75L30 129 aa6.75□□□□□ -1.33
TMEM170A-205ENST00000568559 H3BS24 57 aa6.74□□□□□ -1.33
TMEM170A-205ENST00000568559 DYNC2H1Q8NCM8 4307 aaKnown RBP6.74□□□□□ -1.33
TMEM170A-205ENST00000568559 DNAH7Q8WXX0 4024 aa6.74□□□□□ -1.33
TMEM170A-205ENST00000568559 A6NN06 94 aa6.74□□□□□ -1.33
TMEM170A-205ENST00000568559 KRTAP10-8P60410 259 aa6.72□□□□□ -1.33
TMEM170A-205ENST00000568559 DNAH5Q8TE73 4624 aa6.72□□□□□ -1.33
TMEM170A-205ENST00000568559 SPANXA2-OT1Q8N9U9 137 aa6.71□□□□□ -1.33
TMEM170A-205ENST00000568559 DNAH17Q9UFH2 4485 aa6.71□□□□□ -1.34
TMEM170A-205ENST00000568559 UQCR11O14957 56 aa6.69□□□□□ -1.34
TMEM170A-205ENST00000568559 MIR22HGQ0VDD5 57 aa6.68□□□□□ -1.34
TMEM170A-205ENST00000568559 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
TMEM170A-205ENST00000568559 ADM2Q7Z4H4 148 aa6.67□□□□□ -1.34
TMEM170A-205ENST00000568559 CRIPTQ9P021 101 aa6.67□□□□□ -1.34
TMEM170A-205ENST00000568559 SEC61BP60468 96 aaKnown RBP6.65□□□□□ -1.34
TMEM170A-205ENST00000568559 DNAH2Q9P225 4427 aa6.63□□□□□ -1.35
TMEM170A-205ENST00000568559 HYDINQ4G0P3 5121 aa6.62□□□□□ -1.35
TMEM170A-205ENST00000568559 DYNC1H1Q14204 4646 aaKnown RBP6.62□□□□□ -1.35
TMEM170A-205ENST00000568559 LINC01558Q9Y6Z2 57 aa6.62□□□□□ -1.35
TMEM170A-205ENST00000568559 LRP1BQ9NZR2 4599 aa6.61□□□□□ -1.35
TMEM170A-205ENST00000568559 SACSQ9NZJ4 4579 aa6.6□□□□□ -1.35
TMEM170A-205ENST00000568559 A8MUU9 505 aa6.6□□□□□ -1.35
TMEM170A-205ENST00000568559 C20orf166-AS1Q96NR2 134 aa6.59□□□□□ -1.35
TMEM170A-205ENST00000568559 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.35
TMEM170A-205ENST00000568559 KRTAP16-1A8MUX0 517 aa6.58□□□□□ -1.36
TMEM170A-205ENST00000568559 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
TMEM170A-205ENST00000568559 S4R3F8 94 aa6.57□□□□□ -1.36
TMEM170A-205ENST00000568559 XP32Q5T750 250 aa6.56□□□□□ -1.36
TMEM170A-205ENST00000568559 CSAG1Q6PB30 78 aa6.56□□□□□ -1.36
TMEM170A-205ENST00000568559 A0A1B0GU33 70 aa6.55□□□□□ -1.36
TMEM170A-205ENST00000568559 CAMK2N1Q7Z7J9 78 aa6.54□□□□□ -1.36
TMEM170A-205ENST00000568559 FAT1Q14517 4588 aa6.54□□□□□ -1.36
TMEM170A-205ENST00000568559 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
TMEM170A-205ENST00000568559 RYR2Q92736 4967 aa6.53□□□□□ -1.36
TMEM170A-205ENST00000568559 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
TMEM170A-205ENST00000568559 MT1HL1P0DM35 61 aa6.52□□□□□ -1.37
TMEM170A-205ENST00000568559 DNAH6Q9C0G6 4158 aa6.5□□□□□ -1.37
TMEM170A-205ENST00000568559 TPRXLQ17RH7 258 aa6.5□□□□□ -1.37
TMEM170A-205ENST00000568559 R4GN34 69 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms