RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 A0A1W2PPM0 123 aa7.54□□□□□ -1.2
COMMD4-223ENST00000568301 FABP2P12104 132 aa7.53□□□□□ -1.2
COMMD4-223ENST00000568301 LINC00313P59037 77 aa7.53□□□□□ -1.2
COMMD4-223ENST00000568301 FAM236DA0A1B0GTK5 79 aa7.52□□□□□ -1.21
COMMD4-223ENST00000568301 MT1FP04733 61 aa7.52□□□□□ -1.21
COMMD4-223ENST00000568301 FAM236CP0DP71 79 aa7.52□□□□□ -1.21
COMMD4-223ENST00000568301 BAALC-AS2P0C853 105 aa7.51□□□□□ -1.21
COMMD4-223ENST00000568301 MPLKIPQ8TAP9 179 aa7.51□□□□□ -1.21
COMMD4-223ENST00000568301 SIGMAR1Q99720 223 aa7.51□□□□□ -1.21
COMMD4-223ENST00000568301 KRTAP9-3Q9BYQ3 159 aa7.51□□□□□ -1.21
COMMD4-223ENST00000568301 A0A1W2PNM2 257 aa7.5□□□□□ -1.21
COMMD4-223ENST00000568301 RBM12B-AS1Q9P1G2 102 aa7.5□□□□□ -1.21
COMMD4-223ENST00000568301 IGKV4-1P06312 121 aa7.48□□□□□ -1.21
COMMD4-223ENST00000568301 HRES1P13985 223 aa7.48□□□□□ -1.21
COMMD4-223ENST00000568301 TRBV7-4A0A0J9YYF1 115 aa7.47□□□□□ -1.21
COMMD4-223ENST00000568301 KRTAP10-10P60014 251 aa7.46□□□□□ -1.22
COMMD4-223ENST00000568301 ANKRD29Q8N6D5 301 aa7.46□□□□□ -1.22
COMMD4-223ENST00000568301 JMJD7-PLA2G4BH0Y9G9 81 aa7.45□□□□□ -1.22
COMMD4-223ENST00000568301 RBM3P98179 157 aaKnown RBP7.45□□□□□ -1.22
COMMD4-223ENST00000568301 SPCS1Q9Y6A9 102 aa7.45□□□□□ -1.22
COMMD4-223ENST00000568301 C9JAW5 83 aa7.44□□□□□ -1.22
COMMD4-223ENST00000568301 H3BT86 120 aa7.44□□□□□ -1.22
COMMD4-223ENST00000568301 NOTCH2NLQ7Z3S9 236 aa7.44□□□□□ -1.22
COMMD4-223ENST00000568301 LINC00472Q9H8W2 130 aa7.43□□□□□ -1.22
COMMD4-223ENST00000568301 C21orf62-AS1Q17RA5 79 aa7.41□□□□□ -1.22
COMMD4-223ENST00000568301 DSCR8Q96T75 97 aa7.41□□□□□ -1.22
COMMD4-223ENST00000568301 K7EP34 96 aa7.4□□□□□ -1.22
COMMD4-223ENST00000568301 PDE6GP18545 87 aa7.4□□□□□ -1.22
COMMD4-223ENST00000568301 DEFB116Q30KQ4 102 aa7.4□□□□□ -1.22
COMMD4-223ENST00000568301 GTF2H5Q6ZYL4 71 aa7.4□□□□□ -1.22
COMMD4-223ENST00000568301 MTURNQ8N3F0 131 aa7.39□□□□□ -1.23
COMMD4-223ENST00000568301 IGHV6-1A0A0B4J1U7 121 aa7.38□□□□□ -1.23
COMMD4-223ENST00000568301 A0A1B0GW54 56 aa7.38□□□□□ -1.23
COMMD4-223ENST00000568301 LOC110117498A0A087WWA1 95 aa7.37□□□□□ -1.23
COMMD4-223ENST00000568301 CCKP06307 115 aa7.36□□□□□ -1.23
COMMD4-223ENST00000568301 C8orf87E5RJ46 101 aa7.35□□□□□ -1.23
COMMD4-223ENST00000568301 KRTAP19-6Q3LI70 58 aa7.35□□□□□ -1.23
COMMD4-223ENST00000568301 A0A1B0GV72 72 aa7.34□□□□□ -1.23
COMMD4-223ENST00000568301 F8W1H4 67 aa7.34□□□□□ -1.23
COMMD4-223ENST00000568301 LINC00846Q9NV44 126 aa7.34□□□□□ -1.23
COMMD4-223ENST00000568301 PRO0461Q9UI25 63 aa7.34□□□□□ -1.23
COMMD4-223ENST00000568301 Q6ZQT0 140 aa7.33□□□□□ -1.24
COMMD4-223ENST00000568301 A0A1B0GVX0 72 aa7.32□□□□□ -1.24
COMMD4-223ENST00000568301 SMCPP49901 116 aaPredicted RBP7.32□□□□□ -1.24
COMMD4-223ENST00000568301 SPINK7P58062 85 aa7.31□□□□□ -1.24
COMMD4-223ENST00000568301 ZCCHC13Q8WW36 166 aaKnown RBP7.31□□□□□ -1.24
COMMD4-223ENST00000568301 C14orf132Q9NPU4 83 aa7.29□□□□□ -1.24
COMMD4-223ENST00000568301 VPS25Q9BRG1 176 aa7.27□□□□□ -1.25
COMMD4-223ENST00000568301 J3KT08 172 aa7.26□□□□□ -1.25
COMMD4-223ENST00000568301 A8MWP4 228 aa7.25□□□□□ -1.25
COMMD4-223ENST00000568301 KRTAP6-3Q3LI67 103 aa7.25□□□□□ -1.25
COMMD4-223ENST00000568301 Q8N9P0 234 aaPredicted RBP7.24□□□□□ -1.25
COMMD4-223ENST00000568301 A0A1B0GV90 55 aa7.2□□□□□ -1.26
COMMD4-223ENST00000568301 NDUFB1O75438 58 aa7.2□□□□□ -1.26
COMMD4-223ENST00000568301 ETDBQ3ZM63 59 aa7.2□□□□□ -1.26
COMMD4-223ENST00000568301 WFDC13Q8IUB5 93 aa7.19□□□□□ -1.26
COMMD4-223ENST00000568301 NREPQ16612 68 aa7.17□□□□□ -1.26
COMMD4-223ENST00000568301 C8orf17Q9NRJ1 99 aa7.14□□□□□ -1.27
COMMD4-223ENST00000568301 NEBP20929 6669 aa7.1□□□□□ -1.27
COMMD4-223ENST00000568301 IGKV3D-7A0A0C4DH55 119 aa7.1□□□□□ -1.27
COMMD4-223ENST00000568301 ACYP1P07311 99 aa7.1□□□□□ -1.27
COMMD4-223ENST00000568301 Q6ZVQ6 151 aa7.1□□□□□ -1.27
COMMD4-223ENST00000568301 UBL5Q9BZL1 73 aa7.09□□□□□ -1.27
COMMD4-223ENST00000568301 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
COMMD4-223ENST00000568301 MUC12Q9UKN1 5478 aa7.07□□□□□ -1.28
COMMD4-223ENST00000568301 FAM240AA0A1B0GVK7 77 aa7.06□□□□□ -1.28
COMMD4-223ENST00000568301 BPY2O14599 106 aa7.06□□□□□ -1.28
COMMD4-223ENST00000568301 PRR15Q8IV56 129 aa7.05□□□□□ -1.28
COMMD4-223ENST00000568301 TMEM254Q8TBM7 123 aa7.02□□□□□ -1.29
COMMD4-223ENST00000568301 MRPL34Q9BQ48 92 aaKnown RBP7.02□□□□□ -1.29
COMMD4-223ENST00000568301 MMP24-AS1A0A0U1RRL7 71 aa6.99□□□□□ -1.29
COMMD4-223ENST00000568301 J3QR89 54 aa6.99□□□□□ -1.29
COMMD4-223ENST00000568301 CXCL6P80162 114 aa6.99□□□□□ -1.29
COMMD4-223ENST00000568301 K7EQZ3 153 aa6.97□□□□□ -1.29
COMMD4-223ENST00000568301 hDV103S1A0JD37 113 aa6.96□□□□□ -1.3
COMMD4-223ENST00000568301 NDUFS5O43920 106 aa6.94□□□□□ -1.3
COMMD4-223ENST00000568301 ATP5EP2Q5VTU8 51 aa6.93□□□□□ -1.3
COMMD4-223ENST00000568301 IGKV2D-30A0A075B6S6 120 aa6.92□□□□□ -1.3
COMMD4-223ENST00000568301 IGKV2-30P06310 120 aa6.92□□□□□ -1.3
COMMD4-223ENST00000568301 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
COMMD4-223ENST00000568301 C7orf65Q6ZTY9 151 aa6.91□□□□□ -1.3
COMMD4-223ENST00000568301 LINC00643Q86TS7 51 aa6.91□□□□□ -1.3
COMMD4-223ENST00000568301 Q5W150 140 aa6.9□□□□□ -1.3
COMMD4-223ENST00000568301 Q8N9L7 120 aa6.89□□□□□ -1.31
COMMD4-223ENST00000568301 CASC2Q6XLA1 102 aa6.87□□□□□ -1.31
COMMD4-223ENST00000568301 HCG22E2RYF7 251 aa6.86□□□□□ -1.31
COMMD4-223ENST00000568301 A6NN06 94 aa6.85□□□□□ -1.31
COMMD4-223ENST00000568301 K7ERU9 68 aa6.85□□□□□ -1.31
COMMD4-223ENST00000568301 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
COMMD4-223ENST00000568301 MDN1Q9NU22 5596 aa6.84□□□□□ -1.31
COMMD4-223ENST00000568301 MT1BP07438 61 aa6.81□□□□□ -1.32
COMMD4-223ENST00000568301 FAM236AA0A1B0GUQ0 79 aa6.8□□□□□ -1.32
COMMD4-223ENST00000568301 FAM236BA0A1B0GV22 79 aa6.8□□□□□ -1.32
COMMD4-223ENST00000568301 C5orf47Q569G3 176 aa6.8□□□□□ -1.32
COMMD4-223ENST00000568301 Q5VV11 94 aa6.79□□□□□ -1.32
COMMD4-223ENST00000568301 TP53AIP1Q9HCN2 124 aa6.79□□□□□ -1.32
COMMD4-223ENST00000568301 KMT2DO14686 5537 aa6.78□□□□□ -1.32
COMMD4-223ENST00000568301 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
COMMD4-223ENST00000568301 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
COMMD4-223ENST00000568301 HIST1H4AP62805 103 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms