RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ABCA13Q86UQ4 5058 aa4.43□□□□□ -1.7
SMG1-214ENST00000568038 TRBV7-4A0A0J9YYF1 115 aa4.43□□□□□ -1.7
SMG1-214ENST00000568038 A0A1W2PNM2 257 aa4.43□□□□□ -1.7
SMG1-214ENST00000568038 SPINK1P00995 79 aa4.43□□□□□ -1.7
SMG1-214ENST00000568038 CD164Q04900 197 aa4.43□□□□□ -1.7
SMG1-214ENST00000568038 OBSCN-AS1Q96MR7 158 aa4.43□□□□□ -1.7
SMG1-214ENST00000568038 LRP1Q07954 4544 aaKnown RBP4.42□□□□□ -1.7
SMG1-214ENST00000568038 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
SMG1-214ENST00000568038 TRBV7-7A0A0K0K1E9 115 aa4.42□□□□□ -1.7
SMG1-214ENST00000568038 CCKP06307 115 aa4.42□□□□□ -1.7
SMG1-214ENST00000568038 TEN1Q86WV5 123 aa4.42□□□□□ -1.7
SMG1-214ENST00000568038 LOC110117498A0A087WWA1 95 aa4.41□□□□□ -1.7
SMG1-214ENST00000568038 ETDBQ3ZM63 59 aa4.41□□□□□ -1.7
SMG1-214ENST00000568038 Q6ZQT0 140 aa4.41□□□□□ -1.7
SMG1-214ENST00000568038 A0A087WSZ3 146 aa4.4□□□□□ -1.71
SMG1-214ENST00000568038 PDE6GP18545 87 aa4.4□□□□□ -1.71
SMG1-214ENST00000568038 RPS29P62273 56 aaKnown RBP4.4□□□□□ -1.71
SMG1-214ENST00000568038 Q6Q795 121 aa4.4□□□□□ -1.71
SMG1-214ENST00000568038 RETNLBQ9BQ08 111 aa4.4□□□□□ -1.71
SMG1-214ENST00000568038 LIMD2Q9BT23 127 aa4.39□□□□□ -1.71
SMG1-214ENST00000568038 FAT3Q8TDW7 4589 aa4.38□□□□□ -1.71
SMG1-214ENST00000568038 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
SMG1-214ENST00000568038 MYCBP2O75592 4640 aa4.37□□□□□ -1.71
SMG1-214ENST00000568038 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
SMG1-214ENST00000568038 PRR4Q16378 134 aa4.36□□□□□ -1.71
SMG1-214ENST00000568038 Q5XG85 94 aa4.36□□□□□ -1.71
SMG1-214ENST00000568038 SS18L2Q9UHA2 77 aa4.36□□□□□ -1.71
SMG1-214ENST00000568038 TNXBP22105 4242 aa4.35□□□□□ -1.71
SMG1-214ENST00000568038 C1orf195Q5TG92 126 aa4.35□□□□□ -1.71
SMG1-214ENST00000568038 ASB16-AS1Q495Z4 193 aa4.34□□□□□ -1.71
SMG1-214ENST00000568038 IGLV7-46A0A075B6I9 117 aa4.33□□□□□ -1.72
SMG1-214ENST00000568038 A0A1B0GW54 56 aa4.33□□□□□ -1.72
SMG1-214ENST00000568038 DEFB116Q30KQ4 102 aa4.33□□□□□ -1.72
SMG1-214ENST00000568038 NREPQ16612 68 aa4.32□□□□□ -1.72
SMG1-214ENST00000568038 FP248Q71RG6 208 aaPredicted RBP4.32□□□□□ -1.72
SMG1-214ENST00000568038 Q96NJ1 140 aa4.32□□□□□ -1.72
SMG1-214ENST00000568038 IGKV4-1P06312 121 aa4.31□□□□□ -1.72
SMG1-214ENST00000568038 LINC00472Q9H8W2 130 aa4.31□□□□□ -1.72
SMG1-214ENST00000568038 LINC00846Q9NV44 126 aa4.31□□□□□ -1.72
SMG1-214ENST00000568038 SIGMAR1Q99720 223 aa4.3□□□□□ -1.72
SMG1-214ENST00000568038 Q6ZVQ6 151 aa4.29□□□□□ -1.72
SMG1-214ENST00000568038 UBL5Q9BZL1 73 aa4.28□□□□□ -1.72
SMG1-214ENST00000568038 C9orf92A6NGG3 77 aa4.27□□□□□ -1.73
SMG1-214ENST00000568038 J3KT08 172 aa4.27□□□□□ -1.73
SMG1-214ENST00000568038 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
SMG1-214ENST00000568038 J3QR89 54 aa4.26□□□□□ -1.73
SMG1-214ENST00000568038 BPY2O14599 106 aa4.26□□□□□ -1.73
SMG1-214ENST00000568038 ACYP1P07311 99 aa4.26□□□□□ -1.73
SMG1-214ENST00000568038 KRTAP13-3Q3SY46 172 aa4.26□□□□□ -1.73
SMG1-214ENST00000568038 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
SMG1-214ENST00000568038 FAM240AA0A1B0GVK7 77 aa4.25□□□□□ -1.73
SMG1-214ENST00000568038 TPRXLQ17RH7 258 aa4.25□□□□□ -1.73
SMG1-214ENST00000568038 IGHV6-1A0A0B4J1U7 121 aa4.24□□□□□ -1.73
SMG1-214ENST00000568038 NDUFB1O75438 58 aa4.24□□□□□ -1.73
SMG1-214ENST00000568038 IGKV3D-7A0A0C4DH55 119 aa4.23□□□□□ -1.73
SMG1-214ENST00000568038 A0A1B0GVX0 72 aa4.23□□□□□ -1.73
SMG1-214ENST00000568038 A8MWP4 228 aa4.23□□□□□ -1.73
SMG1-214ENST00000568038 DSCR10P59022 87 aa4.23□□□□□ -1.73
SMG1-214ENST00000568038 NOTCH2NLQ7Z3S9 236 aa4.23□□□□□ -1.73
SMG1-214ENST00000568038 LINC00313P59037 77 aa4.22□□□□□ -1.73
SMG1-214ENST00000568038 Q8N9L7 120 aa4.22□□□□□ -1.73
SMG1-214ENST00000568038 K7EQZ3 153 aa4.21□□□□□ -1.74
SMG1-214ENST00000568038 K7ERU9 68 aa4.21□□□□□ -1.74
SMG1-214ENST00000568038 PRR15Q8IV56 129 aa4.21□□□□□ -1.74
SMG1-214ENST00000568038 C8orf87E5RJ46 101 aa4.2□□□□□ -1.74
SMG1-214ENST00000568038 C8orf17Q9NRJ1 99 aa4.2□□□□□ -1.74
SMG1-214ENST00000568038 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
SMG1-214ENST00000568038 CXCL6P80162 114 aa4.19□□□□□ -1.74
SMG1-214ENST00000568038 LINC00643Q86TS7 51 aa4.19□□□□□ -1.74
SMG1-214ENST00000568038 KRTAP16-1A8MUX0 517 aa4.17□□□□□ -1.74
SMG1-214ENST00000568038 ATP5EP2Q5VTU8 51 aa4.17□□□□□ -1.74
SMG1-214ENST00000568038 HERC1Q15751 4861 aa4.17□□□□□ -1.74
SMG1-214ENST00000568038 MMP24-AS1A0A0U1RRL7 71 aa4.16□□□□□ -1.74
SMG1-214ENST00000568038 WFDC13Q8IUB5 93 aa4.16□□□□□ -1.74
SMG1-214ENST00000568038 hDV103S1A0JD37 113 aa4.15□□□□□ -1.75
SMG1-214ENST00000568038 HIST1H4AP62805 103 aaKnown RBP4.15□□□□□ -1.75
SMG1-214ENST00000568038 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
SMG1-214ENST00000568038 A8MUU9 505 aa4.14□□□□□ -1.75
SMG1-214ENST00000568038 HCG22E2RYF7 251 aa4.14□□□□□ -1.75
SMG1-214ENST00000568038 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
SMG1-214ENST00000568038 CASC2Q6XLA1 102 aa4.14□□□□□ -1.75
SMG1-214ENST00000568038 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
SMG1-214ENST00000568038 LPAP08519 4548 aa4.13□□□□□ -1.75
SMG1-214ENST00000568038 PCOTHQ58A44 107 aa4.13□□□□□ -1.75
SMG1-214ENST00000568038 TMEM254Q8TBM7 123 aa4.13□□□□□ -1.75
SMG1-214ENST00000568038 MRPL34Q9BQ48 92 aaKnown RBP4.13□□□□□ -1.75
SMG1-214ENST00000568038 A0A087WVE0 104 aa4.12□□□□□ -1.75
SMG1-214ENST00000568038 NDUFS5O43920 106 aa4.12□□□□□ -1.75
SMG1-214ENST00000568038 MT-ATP8P03928 68 aa4.12□□□□□ -1.75
SMG1-214ENST00000568038 ATP11AUNQ6ZP68 121 aa4.12□□□□□ -1.75
SMG1-214ENST00000568038 HMCN2Q8NDA2 5059 aa4.1□□□□□ -1.75
SMG1-214ENST00000568038 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
SMG1-214ENST00000568038 LRP2P98164 4655 aa4.06□□□□□ -1.76
SMG1-214ENST00000568038 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
SMG1-214ENST00000568038 KRTAP4-1Q9BYQ7 146 aa4.06□□□□□ -1.76
SMG1-214ENST00000568038 IMUPQ9GZP8 106 aa4.06□□□□□ -1.76
SMG1-214ENST00000568038 Q5W150 140 aa4.04□□□□□ -1.76
SMG1-214ENST00000568038 SCGB1A1P11684 91 aa4.03□□□□□ -1.76
SMG1-214ENST00000568038 TP53AIP1Q9HCN2 124 aa4.03□□□□□ -1.76
SMG1-214ENST00000568038 FAM236AA0A1B0GUQ0 79 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms