RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 VAMP3Q15836 100 aa6.3□□□□□ -1.4
SMG1-213ENST00000567737 Q5VV11 94 aa6.3□□□□□ -1.4
SMG1-213ENST00000567737 A0A1W2PNM2 257 aa6.29□□□□□ -1.4
SMG1-213ENST00000567737 TEN1Q86WV5 123 aa6.29□□□□□ -1.4
SMG1-213ENST00000567737 FAM218AQ96MZ4 157 aa6.29□□□□□ -1.4
SMG1-213ENST00000567737 SNHG12Q9BXW3 62 aa6.29□□□□□ -1.4
SMG1-213ENST00000567737 COPS9Q8WXC6 57 aa6.28□□□□□ -1.4
SMG1-213ENST00000567737 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
SMG1-213ENST00000567737 HSPB8Q9UJY1 196 aa6.28□□□□□ -1.4
SMG1-213ENST00000567737 COA6Q5JTJ3 125 aaKnown RBP6.27□□□□□ -1.41
SMG1-213ENST00000567737 WFDC13Q8IUB5 93 aa6.27□□□□□ -1.41
SMG1-213ENST00000567737 GPR98Q8WXG9 6306 aa6.26□□□□□ -1.41
SMG1-213ENST00000567737 PPDPFLQ8WWR9 84 aa6.26□□□□□ -1.41
SMG1-213ENST00000567737 FABP4P15090 132 aa6.25□□□□□ -1.41
SMG1-213ENST00000567737 S100A2P29034 98 aa6.25□□□□□ -1.41
SMG1-213ENST00000567737 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.24□□□□□ -1.41
SMG1-213ENST00000567737 HIST3H2BBQ8N257 126 aa6.24□□□□□ -1.41
SMG1-213ENST00000567737 IGKV4-1P06312 121 aa6.23□□□□□ -1.41
SMG1-213ENST00000567737 IFITM1P13164 125 aa6.23□□□□□ -1.41
SMG1-213ENST00000567737 ZCCHC13Q8WW36 166 aaKnown RBP6.23□□□□□ -1.41
SMG1-213ENST00000567737 HIST1H2BLQ99880 126 aa6.21□□□□□ -1.42
SMG1-213ENST00000567737 TTTY13Q9BZ97 58 aa6.21□□□□□ -1.42
SMG1-213ENST00000567737 SCGB1D4Q6XE38 83 aa6.2□□□□□ -1.42
SMG1-213ENST00000567737 IGHV6-1A0A0B4J1U7 121 aa6.19□□□□□ -1.42
SMG1-213ENST00000567737 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
SMG1-213ENST00000567737 MUSTN1Q8IVN3 82 aa6.18□□□□□ -1.42
SMG1-213ENST00000567737 SPRR2DP22532 72 aa6.17□□□□□ -1.42
SMG1-213ENST00000567737 H1FX-AS1Q4G0G2 97 aa6.17□□□□□ -1.42
SMG1-213ENST00000567737 SMIM6P0DI80 62 aa6.16□□□□□ -1.42
SMG1-213ENST00000567737 C3orf79P0CE67 100 aa6.15□□□□□ -1.42
SMG1-213ENST00000567737 IMUPQ9GZP8 106 aa6.15□□□□□ -1.42
SMG1-213ENST00000567737 FAM236AA0A1B0GUQ0 79 aa6.14□□□□□ -1.43
SMG1-213ENST00000567737 FAM236BA0A1B0GV22 79 aa6.14□□□□□ -1.43
SMG1-213ENST00000567737 PYY3Q5JQD4 70 aa6.13□□□□□ -1.43
SMG1-213ENST00000567737 C12orf57Q99622 126 aa6.13□□□□□ -1.43
SMG1-213ENST00000567737 DEFB116Q30KQ4 102 aa6.12□□□□□ -1.43
SMG1-213ENST00000567737 C8orf87E5RJ46 101 aa6.11□□□□□ -1.43
SMG1-213ENST00000567737 NDUFV3P56181 108 aaKnown RBP6.11□□□□□ -1.43
SMG1-213ENST00000567737 KRTDAPP60985 99 aa6.11□□□□□ -1.43
SMG1-213ENST00000567737 SPRR2GQ9BYE4 73 aa6.1□□□□□ -1.43
SMG1-213ENST00000567737 SYS1-DBNDD2H3BUS1 97 aa6.08□□□□□ -1.44
SMG1-213ENST00000567737 H3BMG7 143 aa6.07□□□□□ -1.44
SMG1-213ENST00000567737 BVES-AS1Q5T3Y7 98 aa6.07□□□□□ -1.44
SMG1-213ENST00000567737 LYRM7Q5U5X0 104 aa6.06□□□□□ -1.44
SMG1-213ENST00000567737 LINC01545Q5VT33 79 aa6.05□□□□□ -1.44
SMG1-213ENST00000567737 RAB37Q96AX2 223 aa6.05□□□□□ -1.44
SMG1-213ENST00000567737 LINC00472Q9H8W2 130 aa6.05□□□□□ -1.44
SMG1-213ENST00000567737 A0A1B0GVX0 72 aa6.04□□□□□ -1.44
SMG1-213ENST00000567737 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
SMG1-213ENST00000567737 DSCR8Q96T75 97 aa6.03□□□□□ -1.44
SMG1-213ENST00000567737 VAMP8Q9BV40 100 aa6.03□□□□□ -1.44
SMG1-213ENST00000567737 TRBV7-4A0A0J9YYF1 115 aa6.01□□□□□ -1.45
SMG1-213ENST00000567737 TSTD3H0UI37 97 aa6.01□□□□□ -1.45
SMG1-213ENST00000567737 SNCGO76070 127 aa6.01□□□□□ -1.45
SMG1-213ENST00000567737 ATOH7Q8N100 152 aa6.01□□□□□ -1.45
SMG1-213ENST00000567737 PCP4L1A6NKN8 68 aa6□□□□□ -1.45
SMG1-213ENST00000567737 PRAC1Q96KF2 57 aa6□□□□□ -1.45
SMG1-213ENST00000567737 HSBP1L1C9JCN9 74 aa5.99□□□□□ -1.45
SMG1-213ENST00000567737 SPATA45Q537H7 98 aa5.99□□□□□ -1.45
SMG1-213ENST00000567737 IGKV3D-7A0A0C4DH55 119 aa5.97□□□□□ -1.45
SMG1-213ENST00000567737 FABP2P12104 132 aa5.96□□□□□ -1.46
SMG1-213ENST00000567737 ANKRD29Q8N6D5 301 aa5.96□□□□□ -1.46
SMG1-213ENST00000567737 C5orf47Q569G3 176 aa5.95□□□□□ -1.46
SMG1-213ENST00000567737 UQCR10Q9UDW1 63 aa5.94□□□□□ -1.46
SMG1-213ENST00000567737 TRACP01848 142 aa5.93□□□□□ -1.46
SMG1-213ENST00000567737 C14orf144Q96I85 54 aa5.93□□□□□ -1.46
SMG1-213ENST00000567737 COX8AP10176 69 aa5.91□□□□□ -1.46
SMG1-213ENST00000567737 H0YGX0 51 aa5.89□□□□□ -1.47
SMG1-213ENST00000567737 DLEU1O43261 78 aa5.89□□□□□ -1.47
SMG1-213ENST00000567737 CCKP06307 115 aa5.89□□□□□ -1.47
SMG1-213ENST00000567737 A0A1B0GV72 72 aa5.88□□□□□ -1.47
SMG1-213ENST00000567737 KLKP1Q107X0 134 aa5.88□□□□□ -1.47
SMG1-213ENST00000567737 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
SMG1-213ENST00000567737 J3KT08 172 aa5.86□□□□□ -1.47
SMG1-213ENST00000567737 MT3P25713 68 aa5.86□□□□□ -1.47
SMG1-213ENST00000567737 NDUFB1O75438 58 aa5.85□□□□□ -1.47
SMG1-213ENST00000567737 Q6ZVQ6 151 aa5.85□□□□□ -1.47
SMG1-213ENST00000567737 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
SMG1-213ENST00000567737 M0R143 59 aa5.84□□□□□ -1.47
SMG1-213ENST00000567737 C2orf91Q6ZV80 131 aa5.84□□□□□ -1.47
SMG1-213ENST00000567737 C8orf17Q9NRJ1 99 aa5.83□□□□□ -1.48
SMG1-213ENST00000567737 HIGD1BQ9P298 99 aa5.83□□□□□ -1.48
SMG1-213ENST00000567737 CSAG1Q6PB30 78 aa5.82□□□□□ -1.48
SMG1-213ENST00000567737 A0A1B0GX51 115 aa5.81□□□□□ -1.48
SMG1-213ENST00000567737 HSD52Q0P140 79 aa5.81□□□□□ -1.48
SMG1-213ENST00000567737 BATFQ16520 125 aa5.8□□□□□ -1.48
SMG1-213ENST00000567737 VPS25Q9BRG1 176 aa5.8□□□□□ -1.48
SMG1-213ENST00000567737 PRR15Q8IV56 129 aa5.79□□□□□ -1.48
SMG1-213ENST00000567737 C7orf65Q6ZTY9 151 aa5.78□□□□□ -1.48
SMG1-213ENST00000567737 S4R3F8 94 aa5.78□□□□□ -1.48
SMG1-213ENST00000567737 C4orf26Q17RF5 130 aa5.77□□□□□ -1.49
SMG1-213ENST00000567737 HIST1H4GQ99525 98 aa5.77□□□□□ -1.49
SMG1-213ENST00000567737 COL5A1-AS1Q5SY13 56 aa5.76□□□□□ -1.49
SMG1-213ENST00000567737 LCA10Q71F78 164 aa5.76□□□□□ -1.49
SMG1-213ENST00000567737 CEND1Q8N111 149 aa5.76□□□□□ -1.49
SMG1-213ENST00000567737 CRIPTQ9P021 101 aa5.76□□□□□ -1.49
SMG1-213ENST00000567737 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
SMG1-213ENST00000567737 H3BQ85 93 aa5.74□□□□□ -1.49
SMG1-213ENST00000567737 MT1XP80297 61 aa5.74□□□□□ -1.49
SMG1-213ENST00000567737 ORMDL1Q9P0S3 153 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms