RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 HRCT1Q6UXD1 115 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 LINC00575Q6W349 94 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 Q6ZQY7 126 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 LINC00643Q86TS7 51 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 LINC00526Q96FQ7 95 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 SMG1Q96Q15 3661 aaKnown RBP1.7□□□□□ -2.14
CNOT1-209ENST00000566240 CSMD2Q7Z408 3487 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 MTORP42345 2549 aa1.69□□□□□ -2.14
CNOT1-209ENST00000566240 NBDYA0A0U1RRE5 68 aa1.69□□□□□ -2.14
CNOT1-209ENST00000566240 INE1O15225 51 aa1.69□□□□□ -2.14
CNOT1-209ENST00000566240 DPH3Q96FX2 82 aa1.69□□□□□ -2.14
CNOT1-209ENST00000566240 NSD1Q96L73 2696 aaPredicted RBP1.69□□□□□ -2.14
CNOT1-209ENST00000566240 ZANQ9Y493 2812 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 CSMD1Q96PZ7 3565 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 ATOX1O00244 68 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 CCKP06307 115 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 Q6JHZ5 121 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 KRTAP26-1Q6PEX3 210 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 Q6ZRX8 168 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 OBSCN-AS1Q96MR7 158 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 KCNQ1DNQ9H478 68 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 APLNQ9ULZ1 77 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 SETXQ7Z333 2677 aaKnown RBP1.68□□□□□ -2.14
CNOT1-209ENST00000566240 GCN1Q92616 2671 aaKnown RBP1.68□□□□□ -2.14
CNOT1-209ENST00000566240 HECTD1Q9ULT8 2610 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 CHD6Q8TD26 2715 aa1.68□□□□□ -2.14
CNOT1-209ENST00000566240 TRBV7-7A0A0K0K1E9 115 aa1.67□□□□□ -2.14
CNOT1-209ENST00000566240 LY6G6CO95867 125 aa1.67□□□□□ -2.14
CNOT1-209ENST00000566240 MT-ATP8P03928 68 aa1.67□□□□□ -2.14
CNOT1-209ENST00000566240 ITPR2Q14571 2701 aa1.67□□□□□ -2.14
CNOT1-209ENST00000566240 CENPEQ02224 2701 aa1.66□□□□□ -2.14
CNOT1-209ENST00000566240 MXRA5Q9NR99 2828 aa1.66□□□□□ -2.14
CNOT1-209ENST00000566240 A0A096LNI7 61 aa1.66□□□□□ -2.14
CNOT1-209ENST00000566240 FAM236AA0A1B0GUQ0 79 aa1.66□□□□□ -2.14
CNOT1-209ENST00000566240 FAM236BA0A1B0GV22 79 aa1.66□□□□□ -2.14
CNOT1-209ENST00000566240 HAMPP81172 84 aa1.66□□□□□ -2.14
CNOT1-209ENST00000566240 DEFB105AQ8NG35 78 aa1.66□□□□□ -2.14
CNOT1-209ENST00000566240 C22orf24Q9Y442 160 aa1.66□□□□□ -2.14
CNOT1-209ENST00000566240 JMJD1CQ15652 2540 aa1.66□□□□□ -2.14
CNOT1-209ENST00000566240 OTOGQ6ZRI0 2925 aa1.65□□□□□ -2.14
CNOT1-209ENST00000566240 TEP1Q99973 2627 aaKnown RBP1.65□□□□□ -2.15
CNOT1-209ENST00000566240 NREPQ16612 68 aa1.65□□□□□ -2.15
CNOT1-209ENST00000566240 C9orf153Q5TBE3 101 aa1.65□□□□□ -2.15
CNOT1-209ENST00000566240 SVEP1Q4LDE5 3571 aa1.65□□□□□ -2.15
CNOT1-209ENST00000566240 A0A087WTM6 91 aa1.64□□□□□ -2.15
CNOT1-209ENST00000566240 TRBV7-4A0A0J9YYF1 115 aa1.64□□□□□ -2.15
CNOT1-209ENST00000566240 UQCRQO14949 82 aa1.64□□□□□ -2.15
CNOT1-209ENST00000566240 BCE1O60756 84 aa1.64□□□□□ -2.15
CNOT1-209ENST00000566240 SPRR1AP35321 89 aa1.64□□□□□ -2.15
CNOT1-209ENST00000566240 PRLHP81277 87 aa1.64□□□□□ -2.15
CNOT1-209ENST00000566240 LINC00846Q9NV44 126 aa1.64□□□□□ -2.15
CNOT1-209ENST00000566240 MAP1AP78559 2803 aaPredicted RBP1.64□□□□□ -2.15
CNOT1-209ENST00000566240 HIVEP1P15822 2718 aa1.64□□□□□ -2.15
CNOT1-209ENST00000566240 ATRQ13535 2644 aa1.63□□□□□ -2.15
CNOT1-209ENST00000566240 IGLV5-48A0A075B6I7 105 aa1.63□□□□□ -2.15
CNOT1-209ENST00000566240 NDUFB1O75438 58 aa1.63□□□□□ -2.15
CNOT1-209ENST00000566240 COX7CP15954 63 aa1.63□□□□□ -2.15
CNOT1-209ENST00000566240 RPL37AP61513 92 aaKnown RBP1.63□□□□□ -2.15
CNOT1-209ENST00000566240 SETD2Q9BYW2 2564 aaPredicted RBP1.63□□□□□ -2.15
CNOT1-209ENST00000566240 VPS13CQ709C8 3753 aa1.63□□□□□ -2.15
CNOT1-209ENST00000566240 ZFHX3Q15911 3703 aa1.62□□□□□ -2.15
CNOT1-209ENST00000566240 J3KT08 172 aa1.62□□□□□ -2.15
CNOT1-209ENST00000566240 SERP2Q8N6R1 65 aa1.62□□□□□ -2.15
CNOT1-209ENST00000566240 NBPF19A0A087WUL8 3843 aa1.61□□□□□ -2.15
CNOT1-209ENST00000566240 NDUFC1O43677 76 aa1.61□□□□□ -2.15
CNOT1-209ENST00000566240 ATP5EP56381 51 aaPredicted RBP1.61□□□□□ -2.15
CNOT1-209ENST00000566240 ZNF469Q96JG9 3925 aaPredicted RBP1.61□□□□□ -2.15
CNOT1-209ENST00000566240 MAST4O15021 2626 aa1.6□□□□□ -2.15
CNOT1-209ENST00000566240 A0A087WVE0 104 aa1.6□□□□□ -2.15
CNOT1-209ENST00000566240 HCG22E2RYF7 251 aa1.6□□□□□ -2.15
CNOT1-209ENST00000566240 SPRR1BP22528 89 aa1.6□□□□□ -2.15
CNOT1-209ENST00000566240 SPRR4Q96PI1 79 aa1.6□□□□□ -2.15
CNOT1-209ENST00000566240 LIMD2Q9BT23 127 aa1.6□□□□□ -2.15
CNOT1-209ENST00000566240 PLAC8Q9NZF1 115 aa1.6□□□□□ -2.15
CNOT1-209ENST00000566240 RPS28P62857 69 aaKnown RBP1.59□□□□□ -2.15
CNOT1-209ENST00000566240 CUBNO60494 3623 aa1.59□□□□□ -2.15
CNOT1-209ENST00000566240 NF1P21359 2839 aa1.59□□□□□ -2.16
CNOT1-209ENST00000566240 AKAP9Q99996 3911 aa1.59□□□□□ -2.16
CNOT1-209ENST00000566240 NIPBLQ6KC79 2804 aaeCLIP1.58□□□□□ -2.16
CNOT1-209ENST00000566240 ANK3Q12955 4377 aaKnown RBP1.58□□□□□ -2.16
CNOT1-209ENST00000566240 CCDC179H3BU77 68 aa1.58□□□□□ -2.16
CNOT1-209ENST00000566240 CASC2Q6XLA1 102 aa1.58□□□□□ -2.16
CNOT1-209ENST00000566240 C20orf197Q8N268 126 aa1.58□□□□□ -2.16
CNOT1-209ENST00000566240 BRK1Q8WUW1 75 aa1.58□□□□□ -2.16
CNOT1-209ENST00000566240 LCE6AA0A183 80 aa1.57□□□□□ -2.16
CNOT1-209ENST00000566240 MIR22HGQ0VDD5 57 aa1.57□□□□□ -2.16
CNOT1-209ENST00000566240 WFDC13Q8IUB5 93 aa1.57□□□□□ -2.16
CNOT1-209ENST00000566240 TP53AIP1Q9HCN2 124 aa1.57□□□□□ -2.16
CNOT1-209ENST00000566240 K7EQZ3 153 aa1.56□□□□□ -2.16
CNOT1-209ENST00000566240 KRTAP10-4P60372 401 aaPredicted RBP1.56□□□□□ -2.16
CNOT1-209ENST00000566240 KLKP1Q107X0 134 aa1.56□□□□□ -2.16
CNOT1-209ENST00000566240 SSBP3-AS1Q7Z2R9 100 aa1.56□□□□□ -2.16
CNOT1-209ENST00000566240 STAB1Q9NY15 2570 aa1.56□□□□□ -2.16
CNOT1-209ENST00000566240 TENM1Q9UKZ4 2725 aa1.56□□□□□ -2.16
CNOT1-209ENST00000566240 TRAV22A0A0B4J277 110 aa1.55□□□□□ -2.16
CNOT1-209ENST00000566240 H0Y9P7 68 aa1.55□□□□□ -2.16
CNOT1-209ENST00000566240 SPAG11AQ6PDA7 123 aa1.55□□□□□ -2.16
CNOT1-209ENST00000566240 SPINK6Q6UWN8 80 aa1.55□□□□□ -2.16
CNOT1-209ENST00000566240 FLNBO75369 2602 aaKnown RBP1.55□□□□□ -2.16
CNOT1-209ENST00000566240 VWFP04275 2813 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms